>ACON_STRMU (Q59938) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)|
           (Aconitase)
          Length = 888

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +3

Query: 30  TYIHTYIHTYIERAKEKHTWKKQQQANMANSGNTSTYEWTVTSTYAQ 170
           +YI  ++   +   +  H +   Q+ N   + N+  Y+W   STY Q
Sbjct: 594 SYIEQFVTAELFEEEYGHVFSDSQKWNQIETENSKNYQWNQVSTYIQ 640

>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 91  RNSSKQTWRTPETRRHTNGRSHQHMHKPRNGS 186
           R+ S+   R    RR+T  RSH H H+ R+ S
Sbjct: 53  RSKSRSRSRRHSHRRYTRSRSHSHSHRRRSRS 84

>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1|
          Length = 1561

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +3

Query: 39  HTYIHTYIERAKEKHTWKKQQQANMANSGNTSTYEWTVTST 161
           H Y   Y    ++   W K   A MA+ GN+ST   T T+T
Sbjct: 290 HDYAEIYTPSCEKLPAWMKNNPALMASGGNSST---TTTTT 327

>YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III|
          Length = 958

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +3

Query: 39  HTYIHTYIERAKEKHTWKKQQQANMA---NSGNTSTYEWTVTSTYAQAEER*QQMMRRLE 209
           H     ++  ++EK  +K+QQ+  M    + GN   Y W+V S   QA+E  +   + L 
Sbjct: 112 HNLTQLFMAYSREK-MYKEQQKIGMRLYKDFGNAPYYFWSVMSLIMQAQENPELGKKMLL 170

Query: 210 PL 215
           PL
Sbjct: 171 PL 172

>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11|
          Length = 319

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +1

Query: 31  HTYIHTYIHT*SEQKKSTLGRNSSKQTWRTPETRRHTNGRSHQHMHKPR 177
           HT+ H  IHT +         ++   T     T  HT   +H H HKPR
Sbjct: 86  HTFTHLCIHTLT---------HALTLTCAPTRTYAHTRAPTHVHPHKPR 125

>PHNL_DESVM (P21852) Periplasmic [NiFe] hydrogenase large subunit precursor (EC|
           1.12.2.1) (NiFe hydrogenlyase large chain)
          Length = 567

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 51  HTYIERAKEKHTWKKQQQANMANSGNTSTYEWTVTSTY 164
           H++ E A+ +H WK Q Q    +      Y W     Y
Sbjct: 341 HSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRY 378

>ENDD1_HUMAN (O94919) Endonuclease domain-containing 1 protein precursor (EC|
           3.1.30.-)
          Length = 500

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 202 LRIICCYRSSACAYVDVTVHSYVDV--FPEFAMFA 104
           LRI+CC   + C  + + V   VDV  FP + M A
Sbjct: 413 LRILCCLLKAICRVLSIPVRVLVDVATFPVYTMGA 447

>ACON_BRAJA (P70920) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)|
           (Aconitase)
          Length = 906

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/69 (20%), Positives = 29/69 (42%)
 Frame = +3

Query: 21  KFSTYIHTYIHTYIERAKEKHTWKKQQQANMANSGNTSTYEWTVTSTYAQAEER*QQMMR 200
           + + ++  ++   I + K    +K         +  + TY W ++STY Q     + M +
Sbjct: 601 EINAFMKKFVTASIFKKKYADVFKGDTNWRKIKTVESETYRWNMSSTYVQNPPYFEGMKK 660

Query: 201 RLEPLNQAV 227
             EP+   V
Sbjct: 661 EPEPVTDIV 669

>TGFB1_ONCMY (O93449) Transforming growth factor beta-1 precursor (TGF-beta-1)|
          Length = 382

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 6   NSLITKFSTYIHTYIHTYIERAKEKHTWKKQQQANMANSGNTSTYE 143
           NS +      +HTYI +  +  +E +  K+  + NM  S NTS ++
Sbjct: 76  NSTVELSEEQVHTYIPSTQDAEEEAYFAKEVHKFNMKQSENTSKHQ 121

>YQIB_CAEEL (Q09282) Hypothetical protein C45G9.11|
          Length = 354

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -3

Query: 165 HMLM*PSIRMSTCFRSSPCLLAAVSSKCAFLLLALCMYVCMYVCMWRIW 19
           H+ + P   +S+C     C    V   C  +  ALC++  M+   + +W
Sbjct: 183 HLELEPLCCLSSCLVRGGCTTVVVFELCYVVATALCIFEAMFRKKFALW 231

>GEM_PONPY (Q5R541) GTP-binding protein GEM|
          Length = 296

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 73  KKSTLGRNSSKQTWRTPETRRHTNGRSHQHMHKPRNGSSR*CED 204
           ++ T+G    +Q W  P   RH   +   H +  RN  S   ED
Sbjct: 9   RQGTVGMQPQQQRWSIPADGRHLMVQKEPHQYSHRNRHSATPED 52

>GEM_HUMAN (P55040) GTP-binding protein GEM (GTP-binding mitogen-induced|
           T-cell protein) (RAS-like protein KIR)
          Length = 296

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 73  KKSTLGRNSSKQTWRTPETRRHTNGRSHQHMHKPRNGSSR*CED 204
           ++ T+G    +Q W  P   RH   +   H +  RN  S   ED
Sbjct: 9   RQGTVGMQPQQQRWSIPADGRHLMVQKEPHQYSHRNRHSATPED 52

>PIP1_DROME (P25455) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           classes I and II (EC 3.1.4.11) (Phosphoinositide
           phospholipase C)
          Length = 1312

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -1

Query: 194 HLLLPFLGLCIC*CDRPFVCRRVSGVRHVCLLLFLPSVLFFCSLYVCMYVCMYVCGEFGN 15
           H +LP +GLC              G RHV L   +   +   SL++C+ V  YV  +  N
Sbjct: 818 HRVLPVIGLC-------------PGYRHVNLRSEVGQPIALASLFLCVVVKDYVPDDLSN 864

>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3|
          Length = 465

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 108 LLAAVSSKCAFLLLALCMYVCMYV 37
           L + +SS C  + + +CMYVCM V
Sbjct: 365 LCSILSSVCVCVCVCVCMYVCMCV 388

>GTR11_HUMAN (Q9BYW1) Solute carrier family 2, facilitated glucose transporter|
           member 11 (Glucose transporter type 11) (Glucose
           transporter type 10)
          Length = 496

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 200 SHHLLLPFLGLCIC 159
           SH L +PFLG+C+C
Sbjct: 434 SHFLYVPFLGVCVC 447


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,593,171
Number of Sequences: 219361
Number of extensions: 637715
Number of successful extensions: 2543
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2515
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)