ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_462658.1| Oryza sativa (japonica cultivar-group), predic... 170 2e-39
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
3dbj|AK120786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
4dbj|AK109494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
5emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 170 2e-39
6gb|AY107061.1| Zea mays PCO123745 mRNA sequence 68 2e-08
7ref|XM_465232.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
9dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AK068924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11ref|XM_482871.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
13dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
14dbj|AK108789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
15ref|XM_462659.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
16ref|XM_482870.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
17gb|BT016792.1| Zea mays clone Contig625 mRNA sequence 50 0.006
18gb|AY106728.1| Zea mays PCO091418 mRNA sequence 50 0.006
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
20dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
21ref|XM_471786.1| Oryza sativa (japonica cultivar-group), predic... 46 0.089
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.089
23emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4,... 46 0.089
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
25gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.089
26ref|NM_192039.1| Oryza sativa (japonica cultivar-group), predic... 44 0.35
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
29dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
30gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
31emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 44 0.35
32emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 44 0.35
33emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 i... 44 0.35
34gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.4
35gb|AY163158.1| Gallus gallus LMX1 (LMX1) gene, partial cds; and ... 42 1.4
36emb|AL112175.1|CNS019W7 Botrytis cinerea strain T4 cDNA library 42 1.4
37ref|NM_123132.1| Arabidopsis thaliana unknown protein AT5G37730 ... 40 5.5
38ref|XM_361914.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.5
39ref|XM_420390.1| PREDICTED: Gallus gallus similar to Kelch-like ... 40 5.5
40ref|XM_991833.1| PREDICTED: Mus musculus similar to hemicentin 1... 40 5.5
41gb|DQ447008.1| Arabidopsis thaliana clone pENTR221-At5g37730 unk... 40 5.5
42emb|CR386718.1| Gallus gallus finished cDNA, clone ChEST70b22 40 5.5
43gb|AY085404.1| Arabidopsis thaliana clone 150222 mRNA, complete ... 40 5.5
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
45dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
46dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
47dbj|AB018107.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.5
48dbj|AK119465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
49gb|AC145956.4| Gallus gallus BAC clone CH261-14N1 from chromosom... 40 5.5
50emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.5
51gb|DQ147111.1| Zea mays subsp. parviglumis isolate p15 pathogene... 40 5.5
52gb|DQ147105.1| Zea mays subsp. parviglumis isolate p9 pathogenes... 40 5.5
53gb|DQ147104.1| Zea mays subsp. parviglumis isolate p8 pathogenes... 40 5.5
54gb|DQ147103.1| Zea mays subsp. parviglumis isolate p6 pathogenes... 40 5.5
55gb|DQ147102.1| Zea mays subsp. parviglumis isolate p5 pathogenes... 40 5.5
56gb|DQ147101.1| Zea mays subsp. parviglumis isolate p4 pathogenes... 40 5.5
57gb|DQ147098.1| Zea mays subsp. parviglumis isolate p1 pathogenes... 40 5.5 
>ref|XM_462658.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score =  170 bits (86), Expect = 2e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  gcactgcacgggcgcgaaggagagggtgttctcgcccacgtcgtacacgaactggatgtt 316
            |||||||||||||||||||||||| ||||  | ||| |||||||||||||||||||  ||
Sbjct: 1323 gcactgcacgggcgcgaaggagagcgtgtcgtggccgacgtcgtacacgaactggaaatt 1264

                                                                        
Query: 317  ctgctgctggaagttgccgatgatggacaggccccgcgaccccatcaccgtcaggcacag 376
            ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1263 ctgctgctggaagttgccgatgatggagagcccccgggagcccatcaccgtgaggcacag 1204

                                          
Query: 377  cgcgccggacccggagtccagcaccatgta 406
            ||||||||| |||  ||| |||||||||||
Sbjct: 1203 cgcgccggagccgccgtcgagcaccatgta 1174
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  170 bits (86), Expect = 2e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                            
Query: 257      gcactgcacgggcgcgaaggagagggtgttctcgcccacgtcgtacacgaactggatgtt 316
                |||||||||||||||||||||||| ||||  | ||| |||||||||||||||||||  ||
Sbjct: 22324161 gcactgcacgggcgcgaaggagagcgtgtcgtggccgacgtcgtacacgaactggaaatt 22324102

                                                                            
Query: 317      ctgctgctggaagttgccgatgatggacaggccccgcgaccccatcaccgtcaggcacag 376
                ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 22324101 ctgctgctggaagttgccgatgatggagagcccccgggagcccatcaccgtgaggcacag 22324042

                                              
Query: 377      cgcgccggacccggagtccagcaccatgta 406
                ||||||||| |||  ||| |||||||||||
Sbjct: 22324041 cgcgccggagccgccgtcgagcaccatgta 22324012



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 312      atgttctgctgctggaagttgccgatgatgga 343
                ||||||||||||||||||||||||| ||||||
Sbjct: 22329788 atgttctgctgctggaagttgccgaggatgga 22329757



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 14263067 atgttctgctgctggaagttgcc 14263045
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>dbj|AK120786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M08, full
            insert sequence
          Length = 1770

 Score =  170 bits (86), Expect = 2e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  gcactgcacgggcgcgaaggagagggtgttctcgcccacgtcgtacacgaactggatgtt 316
            |||||||||||||||||||||||| ||||  | ||| |||||||||||||||||||  ||
Sbjct: 1555 gcactgcacgggcgcgaaggagagcgtgtcgtggccgacgtcgtacacgaactggaaatt 1496

                                                                        
Query: 317  ctgctgctggaagttgccgatgatggacaggccccgcgaccccatcaccgtcaggcacag 376
            ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1495 ctgctgctggaagttgccgatgatggagagcccccgggagcccatcaccgtgaggcacag 1436

                                          
Query: 377  cgcgccggacccggagtccagcaccatgta 406
            ||||||||| |||  ||| |||||||||||
Sbjct: 1435 cgcgccggagccgccgtcgagcaccatgta 1406
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>dbj|AK109494.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A01, full
            insert sequence
          Length = 1610

 Score =  170 bits (86), Expect = 2e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                        
Query: 257  gcactgcacgggcgcgaaggagagggtgttctcgcccacgtcgtacacgaactggatgtt 316
            |||||||||||||||||||||||| ||||  | ||| |||||||||||||||||||  ||
Sbjct: 1377 gcactgcacgggcgcgaaggagagcgtgtcgtggccgacgtcgtacacgaactggaaatt 1318

                                                                        
Query: 317  ctgctgctggaagttgccgatgatggacaggccccgcgaccccatcaccgtcaggcacag 376
            ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 1317 ctgctgctggaagttgccgatgatggagagcccccgggagcccatcaccgtgaggcacag 1258

                                          
Query: 377  cgcgccggacccggagtccagcaccatgta 406
            ||||||||| |||  ||| |||||||||||
Sbjct: 1257 cgcgccggagccgccgtcgagcaccatgta 1228
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score =  170 bits (86), Expect = 2e-39
 Identities = 134/150 (89%)
 Strand = Plus / Minus

                                                                         
Query: 257   gcactgcacgggcgcgaaggagagggtgttctcgcccacgtcgtacacgaactggatgtt 316
             |||||||||||||||||||||||| ||||  | ||| |||||||||||||||||||  ||
Sbjct: 75065 gcactgcacgggcgcgaaggagagcgtgtcgtggccgacgtcgtacacgaactggaaatt 75006

                                                                         
Query: 317   ctgctgctggaagttgccgatgatggacaggccccgcgaccccatcaccgtcaggcacag 376
             ||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||
Sbjct: 75005 ctgctgctggaagttgccgatgatggagagcccccgggagcccatcaccgtgaggcacag 74946

                                           
Query: 377   cgcgccggacccggagtccagcaccatgta 406
             ||||||||| |||  ||| |||||||||||
Sbjct: 74945 cgcgccggagccgccgtcgagcaccatgta 74916



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 312   atgttctgctgctggaagttgccgatgatgga 343
             ||||||||||||||||||||||||| ||||||
Sbjct: 80692 atgttctgctgctggaagttgccgaggatgga 80661
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>gb|AY107061.1| Zea mays PCO123745 mRNA sequence
          Length = 1041

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 296 gtcgtacacgaactggatgttctgctgctggaagttgccgatgatggaca 345
           |||||||||||  |||| |||||||||||||||||| |||||||||||||
Sbjct: 640 gtcgtacacgacgtggaagttctgctgctggaagttaccgatgatggaca 591
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>ref|XM_465232.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1967

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 309  tggatgttctgctgctggaagttgccgatgatggaca 345
            |||| ||||||||||||||||||||||||||||||||
Sbjct: 1614 tggaagttctgctgctggaagttgccgatgatggaca 1578
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                     
Query: 309      tggatgttctgctgctggaagttgccgatgatggaca 345
                |||| ||||||||||||||||||||||||||||||||
Sbjct: 12465140 tggaagttctgctgctggaagttgccgatgatggaca 12465104



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 159      gcatgcatgcatgcacggat 178
                ||||||||||||||||||||
Sbjct: 16660649 gcatgcatgcatgcacggat 16660630
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>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0705A04
          Length = 182468

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                   
Query: 309    tggatgttctgctgctggaagttgccgatgatggaca 345
              |||| ||||||||||||||||||||||||||||||||
Sbjct: 145277 tggaagttctgctgctggaagttgccgatgatggaca 145241
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>dbj|AK068924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E21, full
            insert sequence
          Length = 1967

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 309  tggatgttctgctgctggaagttgccgatgatggaca 345
            |||| ||||||||||||||||||||||||||||||||
Sbjct: 1614 tggaagttctgctgctggaagttgccgatgatggaca 1578
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>ref|XM_482871.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1298

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 312  atgttctgctgctggaagttgccgatgatggaca 345
            |||||||||||||||| |||||||||||||||||
Sbjct: 1057 atgttctgctgctggacgttgccgatgatggaca 1024
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 312      atgttctgctgctggaagttgccgatgatggaca 345
                |||||||||||||||| |||||||||||||||||
Sbjct: 23063118 atgttctgctgctggacgttgccgatgatggaca 23063085



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 312      atgttctgctgctggaagttgccgatgatgg 342
                ||||||||||||||| |||||||||||||||
Sbjct: 23059672 atgttctgctgctggtagttgccgatgatgg 23059642
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 312    atgttctgctgctggaagttgccgatgatggaca 345
              |||||||||||||||| |||||||||||||||||
Sbjct: 122846 atgttctgctgctggacgttgccgatgatggaca 122813



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 312    atgttctgctgctggaagttgccgatgatgg 342
              ||||||||||||||| |||||||||||||||
Sbjct: 119400 atgttctgctgctggtagttgccgatgatgg 119370
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>dbj|AK108789.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B04, full
            insert sequence
          Length = 1298

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 312  atgttctgctgctggaagttgccgatgatggaca 345
            |||||||||||||||| |||||||||||||||||
Sbjct: 1057 atgttctgctgctggacgttgccgatgatggaca 1024
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>ref|XM_462659.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1395

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 312  atgttctgctgctggaagttgccgatgatgga 343
            ||||||||||||||||||||||||| ||||||
Sbjct: 1325 atgttctgctgctggaagttgccgaggatgga 1294
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>ref|XM_482870.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1347

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 312  atgttctgctgctggaagttgccgatgatgg 342
            ||||||||||||||| |||||||||||||||
Sbjct: 1280 atgttctgctgctggtagttgccgatgatgg 1250
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>gb|BT016792.1| Zea mays clone Contig625 mRNA sequence
          Length = 1862

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 317  ctgctgctggaagttgccgatgatggaca 345
            ||||||||||| |||||||||||||||||
Sbjct: 1405 ctgctgctggatgttgccgatgatggaca 1377
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>gb|AY106728.1| Zea mays PCO091418 mRNA sequence
          Length = 869

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 317 ctgctgctggaagttgccgatgatggaca 345
           ||||||||||| |||||||||||||||||
Sbjct: 438 ctgctgctggatgttgccgatgatggaca 410
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                           
Query: 296     gtcgtacacgaactggatgttctgctgctggaagttgccgatga 339
               |||||||||||  ||  |||||||||||||| ||||||||||||
Sbjct: 5582056 gtcgtacacgacgtgcgtgttctgctgctggtagttgccgatga 5582013
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>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664C05
          Length = 165354

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 296    gtcgtacacgaactggatgttctgctgctggaagttgccgatga 339
              |||||||||||  ||  |||||||||||||| ||||||||||||
Sbjct: 128964 gtcgtacacgacgtgcgtgttctgctgctggtagttgccgatga 128921
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>ref|XM_471786.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 312 atgttctgctgctggaagttgcc 334
           |||||||||||||||||||||||
Sbjct: 923 atgttctgctgctggaagttgcc 901
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11434120 atgttctgctgctggaagttgcc 11434098



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11423663 atgttctgctgctggaagttgcc 11423641



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11403169 atgttctgctgctggaagttgcc 11403147



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 312      atgttctgctgctggaagttgccgatga 339
                |||||||||||||| |||||||| ||||
Sbjct: 11396804 atgttctgctgctgaaagttgcctatga 11396777
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>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09,
              complete sequence
          Length = 146506

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 312    atgttctgctgctggaagttgcc 334
              |||||||||||||||||||||||
Sbjct: 100832 atgttctgctgctggaagttgcc 100810
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11430883 atgttctgctgctggaagttgcc 11430861



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11420426 atgttctgctgctggaagttgcc 11420404



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 312      atgttctgctgctggaagttgcc 334
                |||||||||||||||||||||||
Sbjct: 11399932 atgttctgctgctggaagttgcc 11399910



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 312      atgttctgctgctggaagttgccgatga 339
                |||||||||||||| |||||||| ||||
Sbjct: 11393567 atgttctgctgctgaaagttgcctatga 11393540
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>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15,
              complete sequence
          Length = 159270

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 312    atgttctgctgctggaagttgcc 334
              |||||||||||||||||||||||
Sbjct: 142417 atgttctgctgctggaagttgcc 142395



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 312    atgttctgctgctggaagttgcc 334
              |||||||||||||||||||||||
Sbjct: 131960 atgttctgctgctggaagttgcc 131938



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 312    atgttctgctgctggaagttgcc 334
              |||||||||||||||||||||||
Sbjct: 111466 atgttctgctgctggaagttgcc 111444



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 312    atgttctgctgctggaagttgccgatga 339
              |||||||||||||| |||||||| ||||
Sbjct: 105101 atgttctgctgctgaaagttgcctatga 105074
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>ref|NM_192039.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1455

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 317  ctgctgctggaagttgccgatgatggacaggccc 350
            ||||||| ||| ||||||||||| ||||||||||
Sbjct: 1386 ctgctgcaggatgttgccgatgacggacaggccc 1353
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 312      atgttctgctgctggaagttgccgat 337
                ||||||||||||||| ||||||||||
Sbjct: 24247490 atgttctgctgctggtagttgccgat 24247465
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 317      ctgctgctggaagttgccgatgatggacaggccc 350
                ||||||| ||| ||||||||||| ||||||||||
Sbjct: 27954501 ctgctgcaggatgttgccgatgacggacaggccc 27954468
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>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1144G04
          Length = 194459

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 317    ctgctgctggaagttgccgatgatggacaggccc 350
              ||||||| ||| ||||||||||| ||||||||||
Sbjct: 141182 ctgctgcaggatgttgccgatgacggacaggccc 141149
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 312      atgttctgctgctggaagttgccgat 337
                ||||||||||||||| ||||||||||
Sbjct: 24175696 atgttctgctgctggtagttgccgat 24175671
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 312    atgttctgctgctggaagttgccgat 337
              ||||||||||||||| ||||||||||
Sbjct: 132181 atgttctgctgctggtagttgccgat 132156
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>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 312   atgttctgctgctggaagttgccgat 337
             ||||||||||||||| ||||||||||
Sbjct: 24264 atgttctgctgctggtagttgccgat 24239
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>emb|AL845366.6| Zebrafish DNA sequence from clone CH211-167C22 in linkage group 20,
              complete sequence
          Length = 149189

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 164    catgcatgcacggatcgacaca 185
              ||||||||||||||||||||||
Sbjct: 117934 catgcatgcacggatcgacaca 117955
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 119    ctgatcgacccggccacgcac 139
              |||||||||||||||||||||
Sbjct: 565063 ctgatcgacccggccacgcac 565083
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>gb|AY163158.1| Gallus gallus LMX1 (LMX1) gene, partial cds; and ALC (ALC) gene,
            complete cds
          Length = 11459

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 348  ccccgcgaccccatcaccgtc 368
            |||||||||||||||||||||
Sbjct: 6360 ccccgcgaccccatcaccgtc 6340
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>emb|AL112175.1|CNS019W7 Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  cggatccatcgtatcatccat 32
           |||||||||||||||||||||
Sbjct: 755 cggatccatcgtatcatccat 735
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>ref|NM_123132.1| Arabidopsis thaliana unknown protein AT5G37730 mRNA, complete cds
          Length = 690

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tccatccatggcctatccga 47
           ||||||||||||||||||||
Sbjct: 397 tccatccatggcctatccga 378
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>ref|XM_361914.1| Magnaporthe grisea 70-15 hypothetical protein (MG04359.4) partial cds
          Length = 2352

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  tgttctgctgctggaagttg 332
            ||||||||||||||||||||
Sbjct: 1462 tgttctgctgctggaagttg 1443
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>ref|XM_420390.1| PREDICTED: Gallus gallus similar to Kelch-like 2, Mayven (LOC422422),
            mRNA
          Length = 3493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 160  catgcatgcatgcacggatc 179
            ||||||||||||||||||||
Sbjct: 1140 catgcatgcatgcacggatc 1159
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>ref|XM_991833.1| PREDICTED: Mus musculus similar to hemicentin 1 (LOC622345), mRNA
          Length = 3579

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 atgttctgctgctggaagtt 331
           ||||||||||||||||||||
Sbjct: 530 atgttctgctgctggaagtt 549
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>gb|DQ447008.1| Arabidopsis thaliana clone pENTR221-At5g37730 unknown (At5g37730)
           mRNA, complete cds
          Length = 549

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tccatccatggcctatccga 47
           ||||||||||||||||||||
Sbjct: 364 tccatccatggcctatccga 345
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>emb|CR386718.1| Gallus gallus finished cDNA, clone ChEST70b22
          Length = 2864

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 catgcatgcatgcacggatc 179
           ||||||||||||||||||||
Sbjct: 510 catgcatgcatgcacggatc 529
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>gb|AY085404.1| Arabidopsis thaliana clone 150222 mRNA, complete sequence
          Length = 690

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tccatccatggcctatccga 47
           ||||||||||||||||||||
Sbjct: 397 tccatccatggcctatccga 378
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 325     ggaagttgccgatgatggacaggc 348
               |||||||||||||||| |||||||
Sbjct: 3200678 ggaagttgccgatgatcgacaggc 3200655
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>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gcatgcatgcatgcacggat 178
             ||||||||||||||||||||
Sbjct: 37704 gcatgcatgcatgcacggat 37685
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>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519B12
          Length = 147542

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gcatgcatgcatgcacggat 178
              ||||||||||||||||||||
Sbjct: 102616 gcatgcatgcatgcacggat 102597
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>dbj|AB018107.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K12B20
          Length = 78874

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    tccatccatggcctatccga 47
             ||||||||||||||||||||
Sbjct: 67029 tccatccatggcctatccga 67048
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>dbj|AK119465.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-A02, full
            insert sequence
          Length = 1497

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 312  atgttctgctgctggaagttgccgatga 339
            |||||||||||||| |||||||| ||||
Sbjct: 1371 atgttctgctgctgaaagttgcctatga 1344
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>gb|AC145956.4| Gallus gallus BAC clone CH261-14N1 from chromosome unknown, complete
             sequence
          Length = 243969

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   catgcatgcatgcacggatc 179
             ||||||||||||||||||||
Sbjct: 77461 catgcatgcatgcacggatc 77480
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     acacggcatgcatgcatgca 173
               ||||||||||||||||||||
Sbjct: 3080714 acacggcatgcatgcatgca 3080733
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>gb|DQ147111.1| Zea mays subsp. parviglumis isolate p15 pathogenesis-related
           protein 6 (pr6) gene, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147105.1| Zea mays subsp. parviglumis isolate p9 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147104.1| Zea mays subsp. parviglumis isolate p8 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147103.1| Zea mays subsp. parviglumis isolate p6 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147102.1| Zea mays subsp. parviglumis isolate p5 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147101.1| Zea mays subsp. parviglumis isolate p4 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165
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>gb|DQ147098.1| Zea mays subsp. parviglumis isolate p1 pathogenesis-related protein
           6 (pr6) gene, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gcatgcatgcatgcacggat 178
           ||||||||||||||||||||
Sbjct: 184 gcatgcatgcatgcacggat 165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,510,735
Number of Sequences: 3902068
Number of extensions: 2510735
Number of successful extensions: 56642
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55972
Number of HSP's gapped (non-prelim): 670
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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