>BACC_BACLI (O68008) Bacitracin synthetase 3 (BA3) [Includes: ATP-dependent|
            isoleucine adenylase (IleA) (Isoleucine activase);
            ATP-dependent D-phenylalanine adenylase (D-PheA)
            (D-phenylalanine activase); ATP-dependent histidine
            adenylase (HisA) (Histidine
          Length = 6359

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/62 (25%), Positives = 31/62 (50%)
 Frame = +3

Query: 180  VHKLLAHFVQVITDFTLWQNAHVDQTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQP 359
            V ++ AHFV+V+ D +   +  +DQ E      ++ +L R N+  ++    + +C     
Sbjct: 1445 VERMAAHFVRVLEDISKRTDKRLDQIEAMSEDEKNTLLYRFNDTKTDAPTDKTICQLFAE 1504

Query: 360  RA 365
            RA
Sbjct: 1505 RA 1506

>ILVD_BURPS (Q63WB9) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 252 QTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 407
           Q  D  ++  H +L + N   +ELARRRA      PR  R  L  ++A+A P+
Sbjct: 498 QEGDSITIDAHKLLLQLNVDDAELARRRAAWKQPAPRYTRGVLAKYAALARPA 550

>ILVD_BURMA (Q62LG7) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 252 QTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 407
           Q  D  ++  H +L + N   +ELARRRA      PR  R  L  ++A+A P+
Sbjct: 498 QEGDSITIDAHKLLLQLNVDDAELARRRAAWKQPAPRYTRGVLAKYAALARPA 550

>ILVD2_BURS3 (Q39DS9) Dihydroxy-acid dehydratase 2 (EC 4.2.1.9) (DAD 2)|
          Length = 557

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 252 QTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 407
           Q  D  ++  H +L + N   +ELARRRA      PR  R  L   +A+A P+
Sbjct: 498 QEGDSITIDAHRLLLQLNVDDAELARRRAAWQQPAPRYTRGVLAKFAALARPA 550

>RAD52_ASHGO (Q756F4) DNA repair and recombination protein RAD52|
          Length = 435

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 255 TEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPRARAPLQAHSAVA 398
           T++   LSR   +T  +EG +   R   L  A +P A  P  AH+A A
Sbjct: 170 TDENNELSRANTVTDHSEGPAPKKRNAPLPPAPRPGAMRPEAAHAAPA 217

>ILVD_BURP1 (Q3JV12) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 557

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 252 QTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPR-ARAPLQAHSAVAAPS 407
           Q  D  ++  H +L + N   +ELARRR       PR  R  L  ++A+A P+
Sbjct: 498 QEGDSITIDAHKLLLQLNVDDAELARRRVAWKQPAPRYTRGVLAKYAALARPA 550

>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190|
          Length = 356

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 244 CAFCHSVKSVITCTKWASNLC-TYDAQAH 161
           C FC + ++V+ C    +NLC T DA+ H
Sbjct: 14  CEFCKAYRAVVYCIADTANLCLTCDAKVH 42

>UBP53_MOUSE (P15975) Inactive ubiquitin carboxyl-terminal hydrolase 53|
           (Ubiquitin-specific peptidase 53) (Per-hexamer repeat
           protein 3)
          Length = 1069

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
 Frame = +3

Query: 180 VHKLLAHFVQVITDFTLWQNAHVDQTED-GQSLSRHLVL-------TRQNEGSSELARRR 335
           + ++L +  +++T   +W + H D TED  +SL+ HL L       T +N   SEL    
Sbjct: 234 IRRVLMNCPEIVTIGLVWDSEHSDLTEDVVRSLATHLYLPGLFYRVTDENATDSELHLVG 293

Query: 336 ALC 344
            +C
Sbjct: 294 MIC 296

>KINL_LEICH (P46865) Kinesin-like protein K39 (Fragment)|
          Length = 955

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 261 DGQSLSRHLVLTRQNEGSSELARRRALCGAEQPRAR 368
           D + L+R L   +   G +ELAR  ALC A++  AR
Sbjct: 610 DRERLTRDLQRIQYEYGETELARDVALCAAQEMEAR 645

>EGFL7_RAT (Q6AZ60) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7)
          Length = 279

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/78 (24%), Positives = 32/78 (41%)
 Frame = +1

Query: 178 TYTSC*PTSYKLSQISHCGRTHM*TKQKTVKAYRDTSC*PGKTKAAQS*LDDGPCAEQSN 357
           TY +   T+Y+++     G T    +      ++ T+  PG   AA   +   PC  + +
Sbjct: 65  TYRTIYRTAYRIAYRHSPGLTPSRPRYACCPGWKRTNGLPGACGAA---ICQPPCGNEGS 121

Query: 358 HVRARRCRLTPPWPRRPC 411
            +R  RCR    W    C
Sbjct: 122 CIRPGRCRCPVGWQGDTC 139

>ATG17_NEUCR (Q872W1) Autophagy-related protein 17|
          Length = 568

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 228 LWQNAHVDQTEDGQSLSRH----LVLTRQNEGSSELARRRALCGAEQPRARAPLQAHSAV 395
           L + +H+   E   SL+RH    +   R  EG + LARRRA         +AP+     +
Sbjct: 262 LSEGSHL-MAEHLSSLTRHFDMCVTAVRTTEGGAALARRRAAEATSSDEDQAPVSISGVI 320

Query: 396 AA 401
           +A
Sbjct: 321 SA 322

>LON_AZOBR (P77810) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 810

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 252 QTEDGQSLSRHLVLTRQNEGSSELARRRALCGAEQPRARAPLQAHSAVAAPSLCW 416
           +TEDG+  S  L         S+ AR +AL   ++ R+ +P+ A + V    L W
Sbjct: 248 ETEDGRDESAELEEKINKTRFSKEARDKALAELKKLRSMSPMSAEATVVRNYLDW 302

>COG1_DROME (Q9VGC3) Putative conserved oligomeric Golgi complex component 1|
          Length = 886

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 168 CASYVHKLLAHFVQVITDFTLWQNAHVDQTEDGQSLS 278
           C   + K++ H V V++DF LWQ   ++Q ++ Q  S
Sbjct: 607 CEEKLPKVINHEV-VLSDFALWQTLTLEQRDEDQEQS 642

>INHA_TRIVU (O77755) Inhibin alpha chain precursor|
          Length = 361

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +1

Query: 364 RARRCRLTPPWPRRPCAGRTCAR 432
           RARR  L PPWP  P A R   R
Sbjct: 227 RARRSPLPPPWPWSPAALRLLQR 249


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,698,791
Number of Sequences: 219361
Number of extensions: 1129359
Number of successful extensions: 2740
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2740
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)