Clone Name | rbart17c10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(... | 32 | 0.82 | 2 | RPTN_MOUSE (P97347) Repetin | 30 | 4.1 | 3 | MYPC3_HUMAN (Q14896) Myosin-binding protein C, cardiac-type (Car... | 29 | 9.1 |
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>ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(2+)-ATPase)| Length = 1004 Score = 32.3 bits (72), Expect = 0.82 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +3 Query: 87 ERNRSQLTTCYNLQGTIE-RTVTHHDDTRTWQTTILMSTSLQVTLILLHPA*PFLW 251 ER + T NL T + R ++ D+ R W+ + ST L + +LL+ P +W Sbjct: 224 ERTGYKFTVFSNLDNTTQLRLLSKEDEIRFWKKNSIKSTLLAIICMLLYMIVPMMW 279
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 267 TSDSKCTQSEIQGSTGTGQR*AGLSTDELETDEAQQHGCQSSSPAAKQSRVQI 425 + S C QSEI + GQ L TD D +H +S + + SR ++ Sbjct: 854 SQSSHCGQSEIGKTENQGQNRHSLGTDRTRRDSYVEHSGRSGKLSQQNSREEV 906
>MYPC3_HUMAN (Q14896) Myosin-binding protein C, cardiac-type (Cardiac MyBP-C)| (C-protein, cardiac muscle isoform) Length = 1274 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -2 Query: 417 LWIASQPEKMTDSRVVVPHLFQVHQLT 337 +W+ + E + DSR+ V H+ +VH+LT Sbjct: 576 VWLKNGKELVPDSRIKVSHIGRVHKLT 602 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,056,637 Number of Sequences: 219361 Number of extensions: 1321975 Number of successful extensions: 2773 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2689 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2772 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)