>gb|AY055729.1| Physcomitrella patens cold acclimation protein WCOR413-like protein
           mRNA, complete cds
          Length = 950

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 504 ctgcctgccgccttcatcctcctca 528
           |||||||||||||||||||||||||
Sbjct: 460 ctgcctgccgccttcatcctcctca 484

>gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete sequence
          Length = 109299

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 aaattaaattacatatcacaa 35
          |||||||||||||||||||||
Sbjct: 70 aaattaaattacatatcacaa 90

>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
              BACR11M13, complete sequence
          Length = 190301

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     tgaaattaaattacatatcac 33
              |||||||||||||||||||||
Sbjct: 141607 tgaaattaaattacatatcac 141627

>gb|AC008332.11|AC008332 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
             BACR48D10, complete sequence
          Length = 153250

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tgaaattaaattacatatcac 33
             |||||||||||||||||||||
Sbjct: 81795 tgaaattaaattacatatcac 81815

>gb|AC117503.8| Homo sapiens 12 BAC RP11-338K17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 218476

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 83     aaatgaaaggaacagatctca 103
              |||||||||||||||||||||
Sbjct: 131912 aaatgaaaggaacagatctca 131892

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 5       tggcaaagtgaaattaaattacata 29
               |||||||||||||||| ||||||||
Sbjct: 1324120 tggcaaagtgaaattacattacata 1324144

>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete
             sequence
          Length = 254309

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tgaaattaaattacatatcac 33
             |||||||||||||||||||||
Sbjct: 85043 tgaaattaaattacatatcac 85063

>gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence
          Length = 196485

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 24    tacatatcacaatcctagataaaatgtg 51
             ||||||||| |||| |||||||||||||
Sbjct: 81133 tacatatcaaaatcatagataaaatgtg 81160

>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    tacaagaacatggcaaacaa 183
              ||||||||||||||||||||
Sbjct: 407989 tacaagaacatggcaaacaa 407970

>gb|AF068720.1| Caenorhabditis elegans cosmid K02H11, complete sequence
          Length = 27223

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   cctgcctgccgccttcatcc 522
             ||||||||||||||||||||
Sbjct: 21481 cctgcctgccgccttcatcc 21500

>ref|XM_746313.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g14260)
           partial mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 240 ccctttttgtggatgaacca 259
           ||||||||||||||||||||
Sbjct: 512 ccctttttgtggatgaacca 493

>emb|CR936846.7| Zebrafish DNA sequence from clone DKEY-20N3 in linkage group 1,
             complete sequence
          Length = 80060

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   caaacaacaattctaatgtc 196
             ||||||||||||||||||||
Sbjct: 35637 caaacaacaattctaatgtc 35656

>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete
              sequence
          Length = 203967

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ccaggtaaaaatgaaaggaa 94
              ||||||||||||||||||||
Sbjct: 140284 ccaggtaaaaatgaaaggaa 140303

>emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chromosome 13 Contains the
             3' end of the CDK8 gene for cyclin-dependent kinase 8,
             complete sequence
          Length = 144626

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ggaacagatctcaactcaca 110
             ||||||||||||||||||||
Sbjct: 17746 ggaacagatctcaactcaca 17727

>gb|AC073365.14| Homo sapiens 3 BAC RP11-479M14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179598

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   aacatggcaaacaacaattc 189
             ||||||||||||||||||||
Sbjct: 55044 aacatggcaaacaacaattc 55025

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     aaaatgaaaggaacagatct 101
              ||||||||||||||||||||
Sbjct: 382781 aaaatgaaaggaacagatct 382762

>gb|AC009303.3| Homo sapiens BAC clone RP11-98C1 from 2, complete sequence
          Length = 198652

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    caaggctctacaggaacagggcaa 323
              |||||||||||||||| |||||||
Sbjct: 169450 caaggctctacaggaatagggcaa 169427

>gb|AC093375.3| Homo sapiens BAC clone RP11-135A6 from 2, complete sequence
          Length = 9640

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 34   aatcctagataaaatgtgat 53
            ||||||||||||||||||||
Sbjct: 5102 aatcctagataaaatgtgat 5121

>emb|AL954767.11| Zebrafish DNA sequence from clone CH211-225B14 in linkage group 21,
             complete sequence
          Length = 182923

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    aaattaaattacatatcaca 34
             ||||||||||||||||||||
Sbjct: 78394 aaattaaattacatatcaca 78413

>emb|CT574565.2| Pan troglodytes chromosome X clone CH251-78I22 map Xq28, complete
             sequence
          Length = 170088

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ctcccaggtaaaaatgaaag 91
             ||||||||||||||||||||
Sbjct: 89048 ctcccaggtaaaaatgaaag 89029

>gb|AC123705.12| Mus musculus chromosome 12, clone RP23-355K21, complete sequence
          Length = 217397

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   cttcacctgcctgccgcctt 517
             ||||||||||||||||||||
Sbjct: 76459 cttcacctgcctgccgcctt 76478

>emb|AL928682.11| Mouse DNA sequence from clone RP23-143K9 on chromosome X, complete
             sequence
          Length = 135431

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    gtaaaaatgaaaggaacaga 98
             ||||||||||||||||||||
Sbjct: 82279 gtaaaaatgaaaggaacaga 82298

>emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chromosome X, complete
              sequence
          Length = 228327

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    atgaacttgaaacagatgag 365
              ||||||||||||||||||||
Sbjct: 124983 atgaacttgaaacagatgag 124964

>emb|AL732405.8| Mouse DNA sequence from clone RP23-149P4 on chromosome X, complete
             sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gaaaggaacagatctcaact 106
             ||||||||||||||||||||
Sbjct: 51224 gaaaggaacagatctcaact 51205

>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 109440

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  taaccctttttgtggatgaa 256
            ||||||||||||||||||||
Sbjct: 2952 taaccctttttgtggatgaa 2933


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,906,370
Number of Sequences: 3902068
Number of extensions: 4906370
Number of successful extensions: 107617
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107522
Number of HSP's gapped (non-prelim): 95
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)