>ref|NM_187553.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 191 gctgccgctacgccgccgccgcctt 215
           |||||||| ||||||||||||||||
Sbjct: 139 gctgccgcgacgccgccgccgcctt 115

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 191    gctgccgctacgccgccgccgcctt 215
              |||||||| ||||||||||||||||
Sbjct: 840986 gctgccgcgacgccgccgccgcctt 841010

>ref|XM_733070.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302169.00.0)
           partial mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 105 aaatatacaaaatccatttat 125
           |||||||||||||||||||||
Sbjct: 744 aaatatacaaaatccatttat 764

>ref|XM_736382.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000271.04.0)
           partial mRNA
          Length = 768

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 105 aaatatacaaaatccatttat 125
           |||||||||||||||||||||
Sbjct: 738 aaatatacaaaatccatttat 758

>ref|XM_668935.1| Plasmodium berghei strain ANKA hypothetical protein (PB300563.00.0)
            partial mRNA
          Length = 1503

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 107  atatacaaaatccatttatta 127
            |||||||||||||||||||||
Sbjct: 1475 atatacaaaatccatttatta 1495

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 191    gctgccgctacgccgccgccgcctt 215
              |||||||| ||||||||||||||||
Sbjct: 840984 gctgccgcgacgccgccgccgcctt 841008

>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
              complete sequence
          Length = 162132

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 191    gctgccgctacgccgccgccgcctt 215
              |||||||| ||||||||||||||||
Sbjct: 136531 gctgccgcgacgccgccgccgcctt 136555

>gb|AC151132.3| Bos taurus  BAC CH240-106N15 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 171239

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     acacagccagcactcagatc 83
              ||||||||||||||||||||
Sbjct: 117599 acacagccagcactcagatc 117618

>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     accacaaatcacacacagcc 71
              ||||||||||||||||||||
Sbjct: 122906 accacaaatcacacacagcc 122925

>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence
          Length = 148675

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     cacacacagccagcactcag 80
              ||||||||||||||||||||
Sbjct: 139199 cacacacagccagcactcag 139218

>emb|Y13858.1|BFAMPHIHH Branchiostoma floridae mRNA for AmphiHh gene
          Length = 3610

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   accacaaatcacacacagcc 71
            ||||||||||||||||||||
Sbjct: 2105 accacaaatcacacacagcc 2086

>gb|AC024603.7| Homo sapiens chromosome 10 clone RP11-325D15, complete sequence
          Length = 129243

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    atttattacaagcaaaacca 139
              ||||||||||||||||||||
Sbjct: 120675 atttattacaagcaaaacca 120656

>gb|AC013477.7| Homo sapiens BAC clone RP11-559F19 from 4, complete sequence
          Length = 182092

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    aaatatacaaaatccattta 124
              ||||||||||||||||||||
Sbjct: 136871 aaatatacaaaatccattta 136852

>emb|AJ278677.3|CIN278677 Chelonus inanitus virus 14g1 gene for recombinase, 14g2 gene and
            ORF3, segment CiV14
          Length = 14159

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   taacaaaaccacaaatcaca 64
            ||||||||||||||||||||
Sbjct: 5339 taacaaaaccacaaatcaca 5320

>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence
          Length = 206230

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     cacacacagccagcactcag 80
              ||||||||||||||||||||
Sbjct: 153630 cacacacagccagcactcag 153649

>gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complete sequence
          Length = 176551

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     acacacagccagcactcaga 81
              ||||||||||||||||||||
Sbjct: 160201 acacacagccagcactcaga 160182

>gb|AF289667.1|AF289667 Mus musculus GTF2IRD1 and CYLN2 genes, complete cds
          Length = 201605

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     taacaaaaccacaaatcaca 64
              ||||||||||||||||||||
Sbjct: 151960 taacaaaaccacaaatcaca 151979

>gb|AF289664.1|AF289664 Mus musculus CYLN2, RFC2, WBSCR15, and EIF4H genes, complete cds
          Length = 161852

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    taacaaaaccacaaatcaca 64
             ||||||||||||||||||||
Sbjct: 27477 taacaaaaccacaaatcaca 27496

>gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, complete sequence
          Length = 205702

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    cacacacagccagcactcag 80
             ||||||||||||||||||||
Sbjct: 38380 cacacacagccagcactcag 38399

>gb|AC166938.5| Mus musculus BAC clone RP23-85H24 from chromosome 5, complete sequence
          Length = 231866

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     taacaaaaccacaaatcaca 64
              ||||||||||||||||||||
Sbjct: 200634 taacaaaaccacaaatcaca 200615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,924,692
Number of Sequences: 3902068
Number of extensions: 2924692
Number of successful extensions: 375628
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 374314
Number of HSP's gapped (non-prelim): 1314
length of query: 224
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 202
effective length of database: 17,147,199,772
effective search space: 3463734353944
effective search space used: 3463734353944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)