ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart17b07 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 45.1 bits (105), Expect = 5e-05 Identities = 17/31 (54%), Positives = 23/31 (74%) Frame = -3 Query: 272 VQKAANYGGVMVWERYEDKRTNYSRYAIQWA 180 VQKA NYGG+M+W+R+ DK+T Y + WA Sbjct: 274 VQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 43.5 bits (101), Expect = 1e-04 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = -3 Query: 275 VVQKAANYGGVMVWERYEDKRTNYS 201 V QK NYGG+M+W+RY DK+TNYS Sbjct: 273 VAQKKDNYGGIMLWDRYFDKQTNYS 297
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 33.5 bits (75), Expect = 0.14 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = -3 Query: 275 VVQKAANYGGVMVWERYEDKRTNYS 201 V++++ YGGVM+W +Y D ++ YS Sbjct: 270 VIKRSPKYGGVMLWSKYYDDQSGYS 294
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 33.5 bits (75), Expect = 0.14 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -3 Query: 278 QVVQKAANYGGVMVWERYEDKRTNYS 201 Q V+ NYGG+ +++RY DK+ NY+ Sbjct: 262 QFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 32.7 bits (73), Expect = 0.25 Identities = 10/24 (41%), Positives = 18/24 (75%) Frame = -3 Query: 272 VQKAANYGGVMVWERYEDKRTNYS 201 ++ + YGGVM+W+R+ D ++ YS Sbjct: 263 IKTSPKYGGVMIWDRFNDAQSGYS 286
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 32.0 bits (71), Expect = 0.42 Identities = 10/24 (41%), Positives = 19/24 (79%) Frame = -3 Query: 272 VQKAANYGGVMVWERYEDKRTNYS 201 ++ ++ YGGVM+W+R+ D ++ YS Sbjct: 268 IKGSSKYGGVMLWDRFNDGQSGYS 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 31.6 bits (70), Expect = 0.55 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 272 VQKAANYGGVMVWERYEDKRTNYS 201 ++K+ YGGVM+W ++ D + YS Sbjct: 269 IKKSPKYGGVMLWSKFYDDKNGYS 292
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 30.4 bits (67), Expect = 1.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 272 VQKAANYGGVMVWERYEDKRTNYS 201 ++K+ YGGVM+W ++ D + YS Sbjct: 272 LKKSRKYGGVMLWSKFWDDKNGYS 295
>PRIO_MUSVI (P40244) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 257 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 274 WCRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 +C++RP GG W+ +R GQ G+P PP Sbjct: 23 FCKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_MUSPF (P52114) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 257 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 274 WCRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 +C++RP GG W+ +R GQ G+P PP Sbjct: 23 FCKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_PIG (P49927) Major prion protein precursor (PrP) (CD230 antigen)| Length = 257 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_BOSTR (Q5UJG7) Major prion protein precursor (PrP) (CD230 antigen)| Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_BOSIN (Q5UJI7) Major prion protein precursor (PrP) (CD230 antigen)| Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_BOSGA (Q5UJH0) Major prion protein precursor (PrP) (CD230 antigen)| Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_BISBI (Q5UAF1) Major prion protein precursor (PrP) (CD230 antigen)| Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_ANTCE (Q5UJG1) Major prion protein precursor (PrP) (CD230 antigen)| Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO1_BOVIN (P10279) Major prion protein 1 precursor (PrP) (Major| scrapie-associated fibril protein 1) (CD230 antigen) Length = 264 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_SHEEP (P23907) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_RUPRU (Q5XVM4) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_OVIMU (Q7JK02) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_OVIMO (Q7JIY2) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_OVICA (Q7JIH3) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_ODOHE (P47852) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_MOSCH (Q68G95) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_FELCA (O18754) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_CEREN (P67986) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_CEREL (P67987) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_CAPHI (P52113) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_CANFA (O46501) Major prion protein precursor (PrP) (CD230 antigen)| Length = 255 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_CAMDR (P79141) Major prion protein precursor (PrP) (CD230 antigen)| Length = 255 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO_BUDTA (Q95M08) Major prion protein precursor (PrP) (CD230 antigen)| Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO2_TRAST (P40243) Major prion protein 2 precursor (PrP) (Major| scrapie-associated fibril protein 2) (CD230 antigen) Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>PRIO2_BOVIN (Q01880) Major prion protein 2 precursor (PrP) (Major| scrapie-associated fibril protein 2) Length = 256 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -1 Query: 271 CRRRPTMGGSWSGNVTRTSGQITAGTPSNGLDPP 170 C++RP GG W+ +R GQ G+P PP Sbjct: 24 CKKRPKPGGGWNTGGSRYPGQ---GSPGGNRYPP 54
>GAOA_DACDE (Q01745) Galactose oxidase precursor (EC 1.1.3.9) (GAO)| Length = 680 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -1 Query: 256 TMGGSWSGNVTRTSGQITAGTPSNGLDPPSLRSSP 152 T+GGSWSG V +G++ + + P+ + +P Sbjct: 326 TIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP 360
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 27.7 bits (60), Expect = 7.9 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -3 Query: 254 YGGVMVWERYEDKRTNYSRYAIQW 183 Y G+ +W R DK T YS I++ Sbjct: 284 YAGIALWNRQADKETGYSTNIIRY 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,189,242 Number of Sequences: 219361 Number of extensions: 560889 Number of successful extensions: 1493 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1493 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
