ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart17a10 |
|---|---|
| Clone Library Name | barley_pub |
>PROA_SERMA (P17857) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 30.8 bits (68), Expect = 0.88 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV HT+ Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHTY 228
>PROA_YERPS (Q66DY8) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHT 77 A+LH C QST+P + G GV HT Sbjct: 205 ASLHKLCREQSTIPVITGGIGVCHT 229
>PROA_YERPE (Q8ZC09) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 419 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHT 77 A+LH C QST+P + G GV HT Sbjct: 205 ASLHKLCREQSTIPVITGGIGVCHT 229
>PROA_PHOLL (Q7N7B1) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHT 77 A LH C QST+P + G GV HT Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHT 227
>PROA_ERWCT (Q6D1I4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTHA 83 A LH C QST+P + G GV H +A Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIYA 229
>ATPG_EHRRW (Q5HBD0) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 283 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = -3 Query: 324 AFLSAMVMIPILYNLDMVNVASADRGANEHSSGCVNGKAANGN 196 A+L+ + + + Y L+++ +A + A+EHSS + ++AN N Sbjct: 204 AYLNVLSTMSLSYILNLMYIAFLENCASEHSSRVIAMESANNN 246
>V_RINDR (Q03340) Nonstructural protein V| Length = 299 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 241 IGSSVGAGDVHHVEVVEYRDHDHGGEEGE 327 +G+ +G +H EV Y +DH GE+ E Sbjct: 93 LGAFIGDSSMHSTEVQHYHVYDHSGEKVE 121
>V_RINDK (P60169) Nonstructural protein V| Length = 299 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 241 IGSSVGAGDVHHVEVVEYRDHDHGGEEGE 327 +G+ +G +H EV Y +DH GE+ E Sbjct: 93 LGAFIGDSSMHSTEVQHYHVYDHSGEKVE 121
>PHOSP_RINDR (Q03335) Phosphoprotein (Protein P)| Length = 507 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 241 IGSSVGAGDVHHVEVVEYRDHDHGGEEGE 327 +G+ +G +H EV Y +DH GE+ E Sbjct: 93 LGAFIGDSSMHSTEVQHYHVYDHSGEKVE 121
>PHOSP_RINDK (P35945) Phosphoprotein (Protein P)| Length = 507 Score = 28.9 bits (63), Expect = 3.3 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 241 IGSSVGAGDVHHVEVVEYRDHDHGGEEGE 327 +G+ +G +H EV Y +DH GE+ E Sbjct: 93 LGAFIGDSSMHSTEVQHYHVYDHSGEKVE 121
>PROA_SHISS (Q3Z594) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_SHIFL (Q83SH9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_SHIDS (Q32J27) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_SHIBS (Q325P3) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_ECOLI (P07004) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_ECOL6 (Q8FKM3) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>PROA_ECO57 (Q8X7N4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 417 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C QST+P + G GV H + Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCHIY 228
>STRN3_HUMAN (Q13033) Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)| Length = 797 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 Query: 59 IWSTTYTCIKISIISCKRDRTGDRKRLRLPLAELECTC 172 +W Y+ IK ++SC D T RL P +L C C Sbjct: 589 VWGLAYSGIKNQLLSCSADGT---VRLWNPQEKLPCIC 623
>STRN3_MOUSE (Q9ERG2) Striatin-3 (Cell-cycle autoantigen SG2NA) (S/G2 antigen)| Length = 796 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +2 Query: 59 IWSTTYTCIKISIISCKRDRTGDRKRLRLPLAELECTC 172 +W Y+ IK ++SC D T RL P +L C C Sbjct: 588 VWGLAYSGIKNQLLSCSADGT---IRLWNPQEKLPCVC 622
>PROA_SALTY (P40861) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C QST+P + G GV H Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCH 226
>PROA_SALTI (Q8Z932) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C QST+P + G GV H Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCH 226
>PROA_SALPA (Q5PF69) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C QST+P + G GV H Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCH 226
>PROA_SALCH (Q57ST2) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C QST+P + G GV H Sbjct: 203 AGLHKLCREQSTIPVITGGIGVCH 226
>PROA_PHOPR (Q6LTX2) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 418 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLHTH 80 A LH C ST+P + G +G+ H + Sbjct: 204 AGLHKMCKENSTIPVIIGGFGISHIY 229
>PROA_VIBCH (Q9KPT9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C STVP + G +G+ H Sbjct: 204 AGLHKMCKENSTVPVIIGGFGISH 227
>RFX1_YEAST (P48743) RFX-like DNA-binding protein RFX1| Length = 811 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -3 Query: 270 NVASADRGANEHSSGCVNGKAANGN 196 N+ RG+N++S+G NG + N N Sbjct: 46 NIEPTSRGSNDNSNGPSNGSSVNSN 70
>DUS_RHOCA (Q08111) Probable tRNA-dihydrouridine synthase (EC 1.-.-.-)| (Nitrogen regulation protein nifR3) Length = 324 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -3 Query: 327 LAFLSAMVMIPILYNLDMVNVASADRGANEH-SSGCVNGKAANG 199 +A + A V +P++ N D+ + ASA R ++ ++G + G+ A G Sbjct: 189 IAAVRAAVSVPVVANGDITDAASARRALDQSGAAGVMVGRGAQG 232
>PROA_VIBVY (Q7MN58) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C ST+P + G +G+ H Sbjct: 204 AGLHKMCKENSTIPVIIGGFGISH 227
>PROA_VIBVU (Q8DF94) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C ST+P + G +G+ H Sbjct: 204 AGLHKMCKENSTIPVIIGGFGISH 227
>PROA_VIBPA (Q87RU9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 3 AALHYQCGWQSTVPSVHGAYGVLH 74 A LH C ST+P + G +G+ H Sbjct: 204 AGLHKMCKENSTIPVIIGGFGISH 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,933,502 Number of Sequences: 219361 Number of extensions: 585031 Number of successful extensions: 1603 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1603 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
