>gb|BT016247.1| Zea mays clone Contig80 mRNA sequence
          Length = 1290

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 277 gtcgaggttgtagagtatcgggatcatgaccatggcggagaggaaggcgagcagcgggc 335
           ||||||| |||||||||| |||| ||||||||||| ||| ||||||||||| |||||||
Sbjct: 846 gtcgaggctgtagagtatggggaccatgaccatggaggacaggaaggcgaggagcgggc 788

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 277      gtcgaggttgtagagtatcgggatcatgaccatggcggagaggaaggcgagcagcgggc 335
                ||||||||||||||| || ||||||||||| | || ||||||||||||||| |||||||
Sbjct: 18876065 gtcgaggttgtagaggatggggatcatgacgagggaggagaggaaggcgaggagcgggc 18876007



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 27       tggcagtctactgtaccatca 47
                |||||||||||||||||||||
Sbjct: 18876344 tggcagtctactgtaccatca 18876324

>dbj|AK107667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-H04, full
           insert sequence
          Length = 1348

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 277 gtcgaggttgtagagtatcgggatcatgaccatggcggagaggaaggcgagcagcgggc 335
           ||||||||||||||| || ||||||||||| | || ||||||||||||||| |||||||
Sbjct: 873 gtcgaggttgtagaggatggggatcatgacgagggaggagaggaaggcgaggagcgggc 815



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 27   tggcagtctactgtaccatca 47
            |||||||||||||||||||||
Sbjct: 1152 tggcagtctactgtaccatca 1132

>ref|XM_955181.1| Neurospora crassa OR74A hypothetical protein (NCU07113.1) partial
           mRNA
          Length = 1611

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 127 tcgaaaacgccttcgtcttcctctggc 153
           |||||||||||||||||||||||||||
Sbjct: 968 tcgaaaacgccttcgtcttcctctggc 994

>ref|XM_327398.1| Neurospora crassa OR74A hypothetical protein (NCU07113.1) partial
           mRNA
          Length = 1611

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 127 tcgaaaacgccttcgtcttcctctggc 153
           |||||||||||||||||||||||||||
Sbjct: 968 tcgaaaacgccttcgtcttcctctggc 994

>gb|U50071.1| Caenorhabditis elegans cosmid B0350, complete sequence
          Length = 42400

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   gtcttcctctggcggaactgga 162
             ||||||||||||||||||||||
Sbjct: 36280 gtcttcctctggcggaactgga 36259

>ref|NM_001026097.2| Caenorhabditis elegans UNCoordinated family member (unc-44) (unc-44)
             mRNA, complete cds
          Length = 21112

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   gtcttcctctggcggaactgga 162
             ||||||||||||||||||||||
Sbjct: 17458 gtcttcctctggcggaactgga 17437

>gb|U39847.1|CEU39847 Caenorhabditis elegans AO13 ankyrin, AO66 ankyrin and AO49 ankyrin
             (unc-44) gene, three alternatively spliced forms, complete
             cds
          Length = 31002

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   gtcttcctctggcggaactgga 162
             ||||||||||||||||||||||
Sbjct: 25975 gtcttcctctggcggaactgga 25954

>ref|XM_960317.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial
            mRNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 203  ttcgccgccttgccgttgacg 223
            |||||||||||||||||||||
Sbjct: 1709 ttcgccgccttgccgttgacg 1689

>ref|XM_330210.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial
            mRNA
          Length = 2574

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 203  ttcgccgccttgccgttgacg 223
            |||||||||||||||||||||
Sbjct: 1709 ttcgccgccttgccgttgacg 1689

>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24
          Length = 75337

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   ttcgccgccttgccgttgacg 223
             |||||||||||||||||||||
Sbjct: 47213 ttcgccgccttgccgttgacg 47193

>dbj|AB227296.1| Aspergillus oryzae cDNA, contig sequence: AoEST4160
          Length = 732

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 49  ttcatggtgcatatggagtac 69
           |||||||||||||||||||||
Sbjct: 594 ttcatggtgcatatggagtac 614

>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 49      ttcatggtgcatatggagtac 69
               |||||||||||||||||||||
Sbjct: 1200583 ttcatggtgcatatggagtac 1200603

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   tcgaaaacgccttcgtcttc 146
             ||||||||||||||||||||
Sbjct: 60929 tcgaaaacgccttcgtcttc 60948

>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    atacacatgcattaagataa 92
             ||||||||||||||||||||
Sbjct: 92558 atacacatgcattaagataa 92577

>gb|AC155635.3| Mus musculus BAC clone RP24-252C1 from chromosome 9, complete sequence
          Length = 154485

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    gacaggacaggagatcgaaa 132
              ||||||||||||||||||||
Sbjct: 114265 gacaggacaggagatcgaaa 114284

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 311      gcggagaggaaggcgagcag 330
                ||||||||||||||||||||
Sbjct: 17000916 gcggagaggaaggcgagcag 17000935

>emb|AL670860.6| Mouse DNA sequence from clone RP23-50K11 on chromosome 2, complete
            sequence
          Length = 83914

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   agttcatggtgcatatggag 66
            ||||||||||||||||||||
Sbjct: 3467 agttcatggtgcatatggag 3448

>gb|AF133300.2|AF133300 Mus musculus MOR 3'Beta1, MOR 3'Beta2, MOR 3'Beta3, and MOR 3'Beta4
             genes, complete cds; Cbx3 pseudogene, complete sequence;
             and MOR 3'Beta5 and MOR 3'Beta6 genes, complete cds
          Length = 92000

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    atacacatgcattaagataa 92
             ||||||||||||||||||||
Sbjct: 29567 atacacatgcattaagataa 29548

>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0016H06
          Length = 148158

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   gcggagaggaaggcgagcag 330
             ||||||||||||||||||||
Sbjct: 80327 gcggagaggaaggcgagcag 80346

>dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-466C23, complete
             sequence
          Length = 166042

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   cgccttcgtcttcctctggc 153
             ||||||||||||||||||||
Sbjct: 46686 cgccttcgtcttcctctggc 46705

>emb|CR956363.11| Pig DNA sequence from clone CH242-60A21 on chromosome 17, complete
              sequence
          Length = 208621

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 85     taagataagcatcatatcatgtaaaagg 112
              ||||||||||||||||| ||||||||||
Sbjct: 180019 taagataagcatcatat-atgtaaaagg 180045

>dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-7G15, complete
             sequence
          Length = 110892

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   cgccttcgtcttcctctggc 153
             ||||||||||||||||||||
Sbjct: 54158 cgccttcgtcttcctctggc 54177


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,590,524
Number of Sequences: 3902068
Number of extensions: 2590524
Number of successful extensions: 55314
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 55175
Number of HSP's gapped (non-prelim): 140
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)