>HAIR_RAT (P97609) Protein hairless|
          Length = 1181

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 242 LQDKELAVLAPHWQPRCLPEPVQQDIPCYQPHRTRSWHQ*PRHWL 376
           L + ++   AP W P CLP  +   +P   P R+  W   P  W+
Sbjct: 146 LLETKILERAPFWVPTCLPPYLMSSLP---PERSYDWPLAPSPWV 187

>HAIR_MOUSE (Q61645) Protein hairless|
          Length = 1182

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 242 LQDKELAVLAPHWQPRCLPEPVQQDIPCYQPHRTRSWHQ*PRHWL 376
           L + ++   AP W P CLP  +   +P   P R   W   P  W+
Sbjct: 146 LLETKILERAPFWVPTCLPPYLMSSLP---PERPYDWPLAPNPWV 187

>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
 Frame = -3

Query: 441 LSSCRLCATQLSWHVRCTSAP-------SSQWRGY*CHERVRCGW*HGISCCTGSGKQRG 283
           L SC  C    +    CT  P       + Q+    C E   C W     CC        
Sbjct: 21  LCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSESPNCHW-----CCCSWANDPN 75

Query: 282 CQCGASTASSLSC 244
           C+C  + +S+L+C
Sbjct: 76  CKCCCTASSNLNC 88

>LYXK_ECOLI (P37677) L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.53) (EC|
           2.7.1.-) (L-xylulokinase) (3-dehydro-L-gulonate kinase)
          Length = 498

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 132 GNESHENFWIKFCGHTGHLQVTTPDFSPLGCFGWVIRCRI 251
           G  +H + W++       L++  P     GCFG  +  R+
Sbjct: 401 GGPAHSDVWMQMLADVSGLRIELPQVEETGCFGAALAARV 440

>CU125_LOCMI (P83990) Cuticle protein 12.5 (LM-12.5) (LM-ACP 12.5)|
          Length = 129

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -1

Query: 467 ANAYASYSGYPVAGYAQPNYPGTYAAPQH 381
           A AYA Y+    AGYA P Y    AA  H
Sbjct: 8   APAYAGYAAPAYAGYAAPAYAAPVAAVAH 36

>NEUR4_MOUSE (Q8BZL1) Sialidase-4 (EC 3.2.1.18) (Neuraminidase 4)|
           (N-acetyl-alpha-neuraminidase 4)
          Length = 501

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 129 HVHSFTPCSFMHTMGPLRV 73
           HV S  PCS+   MGP RV
Sbjct: 11  HVDSLVPCSYWKVMGPTRV 29

>ALCA_BORPE (P65199) Alcaligin biosynthesis enzyme (EC 1.-.-.-)|
          Length = 461

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 31/93 (33%), Positives = 40/93 (43%)
 Frame = +2

Query: 152 FLDKILRAYRPSSGYDPGFFTSGLLWLGHTLQDKELAVLAPHWQPRCLPEPVQQDIPCYQ 331
           FLDK        SG+D   +  G+L    TLQ+  LA L     PR     +     C  
Sbjct: 34  FLDK-------KSGFD---WHPGMLIETSTLQNPFLADLVSLADPRSEYSYLNY---CKL 80

Query: 332 PHRTRSWHQ*PRHWLLGAEVQRTCQDSWVAHNL 430
            +R  S++    H+L  AE  R CQ  WVA  L
Sbjct: 81  TNRIYSYYMRENHYLSRAEYTRYCQ--WVAARL 111

>ALCA_BORPA (P65200) Alcaligin biosynthesis enzyme (EC 1.-.-.-)|
          Length = 461

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 31/93 (33%), Positives = 40/93 (43%)
 Frame = +2

Query: 152 FLDKILRAYRPSSGYDPGFFTSGLLWLGHTLQDKELAVLAPHWQPRCLPEPVQQDIPCYQ 331
           FLDK        SG+D   +  G+L    TLQ+  LA L     PR     +     C  
Sbjct: 34  FLDK-------KSGFD---WHPGMLIETSTLQNPFLADLVSLADPRSEYSYLNY---CKL 80

Query: 332 PHRTRSWHQ*PRHWLLGAEVQRTCQDSWVAHNL 430
            +R  S++    H+L  AE  R CQ  WVA  L
Sbjct: 81  TNRIYSYYMRENHYLSRAEYTRYCQ--WVAARL 111

>ALCA_BORBR (Q44740) Alcaligin biosynthesis enzyme (EC 1.-.-.-)|
          Length = 461

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 31/93 (33%), Positives = 40/93 (43%)
 Frame = +2

Query: 152 FLDKILRAYRPSSGYDPGFFTSGLLWLGHTLQDKELAVLAPHWQPRCLPEPVQQDIPCYQ 331
           FLDK        SG+D   +  G+L    TLQ+  LA L     PR     +     C  
Sbjct: 34  FLDK-------KSGFD---WHPGMLIETSTLQNPFLADLVSLADPRSEYSYLNY---CKL 80

Query: 332 PHRTRSWHQ*PRHWLLGAEVQRTCQDSWVAHNL 430
            +R  S++    H+L  AE  R CQ  WVA  L
Sbjct: 81  TNRIYSYYMRENHYLSRAEYTRYCQ--WVAARL 111

>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42|
          Length = 723

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
 Frame = -3

Query: 441 LSSCRLCATQLSWHVRCTSAP-------SSQWRGY*CHERVRCGW*HGISCCTGSGKQRG 283
           L SC  C    +    CT  P       + Q+    C E   C W     CC        
Sbjct: 21  LFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAENPNCHW-----CCCSWANDPN 75

Query: 282 CQCGASTASSLSC 244
           C+C  + +++L C
Sbjct: 76  CKCCCTASTNLKC 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,019,838
Number of Sequences: 219361
Number of extensions: 1436761
Number of successful extensions: 3880
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3872
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)