ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
2dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
3dbj|AK105833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
4dbj|AK060485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
5emb|AL358532.11| Human DNA sequence from clone RP11-186O14 on ch... 50 0.007
6gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49... 46 0.11
7gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32... 46 0.11
8gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, r... 46 0.11
9gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 44 0.44
10gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, comple... 44 0.44
11emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chr... 44 0.44
12gb|AC168021.4| Mus musculus BAC clone CH25-320O8 from chromosome... 42 1.7
13gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, comple... 42 1.7
14emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chr... 42 1.7
15emb|AL929234.9| Mouse DNA sequence from clone RP24-225K18 on chr... 42 1.7
16gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, c... 40 6.8
17gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome ... 40 6.8
18ref|XM_468748.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
19gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
20gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, co... 40 6.8
21gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, co... 40 6.8
22ref|XM_593715.2| PREDICTED: Bos taurus similar to CG16989-PA (LO... 40 6.8
23gb|AC134871.3| Mus musculus BAC clone RP23-183L19 from chromosom... 40 6.8
24gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, co... 40 6.8
25gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, comp... 40 6.8
26gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, comp... 40 6.8
27gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosom... 40 6.8
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
29gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complet... 40 6.8
30gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, compl... 40 6.8
31emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chro... 40 6.8
32gb|AY444343.1| Hypocrea jecorina strain QM 9414 glucose transpor... 40 6.8
33emb|AL031633.1|CEY39A1A Caenorhabditis elegans YAC Y39A1A, compl... 40 6.8
34emb|BX927349.12| Zebrafish DNA sequence from clone DKEY-84K15 in... 40 6.8
35gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, comple... 40 6.8
36ref|XM_724073.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.8
37gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complet... 40 6.8
38gb|AC004142.2| Homo sapiens BAC clone CTB-118D7 from 7, complete... 40 6.8
39ref|XM_675354.1| Plasmodium berghei strain ANKA Pb-reticulocyte ... 40 6.8
40emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chr... 40 6.8
41emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ... 40 6.8
42emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, ... 40 6.8
43emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, B... 40 6.8
44emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.8
45gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, com... 40 6.8
46gb|AC091817.6| Homo sapiens chromosome 10 clone RP11-397P14, com... 40 6.8
47dbj|AK135261.1| Mus musculus 12 days embryo male wolffian duct i... 40 6.8
48gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, com... 40 6.8
49emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in ... 40 6.8
50emb|BX247880.13| Zebrafish DNA sequence from clone CH211-270J21 ... 40 6.8
51gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 40 6.8
52dbj|AK036251.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 6.8
53gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574... 40 6.8
54gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 40 6.8
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
57dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
58gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome... 40 6.8
59gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N... 40 6.8
60gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complet... 40 6.8
61gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 40 6.8
62gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana... 40 6.8
63dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
64dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
65ref|XM_310392.2| Anopheles gambiae str. PEST ENSANGP00000018924 ... 40 6.8
66gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 40 6.8
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
68gb|AC156793.3| Mus musculus BAC clone RP24-148D3 from chromosome... 40 6.8
69emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.8
70emb|CT010567.11| Mouse DNA sequence from clone RP23-387D5 on chr... 40 6.8
71gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, comple... 40 6.8
72gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, comple... 40 6.8
73gb|DQ280421.1| Rhynchosporium secalis microsatellite srs13tctg s... 40 6.8
74emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chr... 40 6.8
75emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chro... 40 6.8
76emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chr... 40 6.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                        
Query: 404      agctagaagagctcccagtcgaaccgcgggatcggcgagg 443
                ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 20193575 agctagaagagctcccaatcgaaccgcgggatcggcgagg 20193614



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 48       gaatcacatatacatgctatttttt 72
                |||||||||||||||||| ||||||
Sbjct: 20193152 gaatcacatatacatgctgtttttt 20193176
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0047P18
          Length = 169128

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                     
Query: 404   agctagaagagctcccagtcgaaccgcgggatcggcgagg 443
             ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 87075 agctagaagagctcccaatcgaaccgcgggatcggcgagg 87114



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    gaatcacatatacatgctatttttt 72
             |||||||||||||||||| ||||||
Sbjct: 86652 gaatcacatatacatgctgtttttt 86676
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>dbj|AK105833.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E09, full
            insert sequence
          Length = 2079

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 404  agctagaagagctcccagtcgaaccgcgggatcggcgagg 443
            ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1651 agctagaagagctcccaatcgaaccgcgggatcggcgagg 1612



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 48   gaatcacatatacatgctatttttt 72
            |||||||||||||||||| ||||||
Sbjct: 2074 gaatcacatatacatgctgtttttt 2050
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>dbj|AK060485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D08, full
            insert sequence
          Length = 1811

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                    
Query: 404  agctagaagagctcccagtcgaaccgcgggatcggcgagg 443
            ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1383 agctagaagagctcccaatcgaaccgcgggatcggcgagg 1344



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 48   gaatcacatatacatgctatttttt 72
            |||||||||||||||||| ||||||
Sbjct: 1806 gaatcacatatacatgctgtttttt 1782
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>emb|AL358532.11| Human DNA sequence from clone RP11-186O14 on chromosome 10 Contains the
             LIPF gene for gastric lipase, the genes for two novel
             ab-hydrolase associated lipase region domain containing
             proteins and a CHC1L (chromosome condensation 1-like
             RCC1-like G exchanging factor RLG) pseudogene, complete
             sequence
          Length = 161826

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 107   aagacaccacccaccccccaccacttatt 135
             |||||||| ||||||||||||||||||||
Sbjct: 48935 aagacacctcccaccccccaccacttatt 48963
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>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone
             BACR05M17, complete sequence
          Length = 182039

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 305   ggcagagcagagcagcgcagagc 327
             |||||||||||||||||||||||
Sbjct: 23402 ggcagagcagagcagcgcagagc 23424
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>gb|AE003818.3| Drosophila melanogaster chromosome 2R, section 32 of 73 of the complete
             sequence
          Length = 291923

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 305   ggcagagcagagcagcgcagagc 327
             |||||||||||||||||||||||
Sbjct: 28906 ggcagagcagagcagcgcagagc 28884
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>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones
             DS08976 and DS01149, complete sequence
          Length = 129605

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 305   ggcagagcagagcagcgcagagc 327
             |||||||||||||||||||||||
Sbjct: 69762 ggcagagcagagcagcgcagagc 69740
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>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    tatgaatcacatatacatgcta 66
             ||||||||||||||||||||||
Sbjct: 40098 tatgaatcacatatacatgcta 40119
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>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence
          Length = 177985

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 243   ggggctgggagaagaaaccatc 264
             ||||||||||||||||||||||
Sbjct: 59254 ggggctgggagaagaaaccatc 59233
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>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete
              sequence
          Length = 233212

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 113    ccacccaccccccaccacttattttt 138
              |||||||||| |||||||||||||||
Sbjct: 163090 ccacccacccaccaccacttattttt 163065
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>gb|AC168021.4| Mus musculus BAC clone CH25-320O8 from chromosome 9, complete sequence
          Length = 96013

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    tgttgtgccatgaaaaatccttcac 103
             |||||| ||||||||||||||||||
Sbjct: 64928 tgttgttccatgaaaaatccttcac 64952
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>gb|AC016770.10| Homo sapiens BAC clone RP11-564H1 from 2, complete sequence
          Length = 191919

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 268   gaaaaggaaagaataaacaga 288
             |||||||||||||||||||||
Sbjct: 13933 gaaaaggaaagaataaacaga 13913
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>emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chromosome 14, complete
             sequence
          Length = 206513

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   gggcagagcagagcagcgcag 324
             |||||||||||||||||||||
Sbjct: 36984 gggcagagcagagcagcgcag 37004
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>emb|AL929234.9| Mouse DNA sequence from clone RP24-225K18 on chromosome 11, complete
              sequence
          Length = 168500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 307    cagagcagagcagcgcagagc 327
              |||||||||||||||||||||
Sbjct: 108948 cagagcagagcagcgcagagc 108968
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>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence
          Length = 182073

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ggaaagaataaacagacgga 292
              ||||||||||||||||||||
Sbjct: 136329 ggaaagaataaacagacgga 136348
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>gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome 9, complete sequence
          Length = 210475

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    gggcagagcagagcagcgcagagc 327
              |||||||||||||||| |||||||
Sbjct: 113869 gggcagagcagagcagagcagagc 113846
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>ref|XM_468748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 466  cggcttcgtcgtggtggtcgcggc 489
            |||||||||||||||||| |||||
Sbjct: 1103 cggcttcgtcgtggtggtggcggc 1126
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
             map E30331S, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 466   cggcttcgtcgtggtggtcgcggc 489
             |||||||||||||||||| |||||
Sbjct: 62421 cggcttcgtcgtggtggtggcggc 62444
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>gb|AC138290.9| Mus musculus chromosome 10, clone RP23-245C15, complete sequence
          Length = 151470

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 306   gcagagcagagcagcgcagagcga 329
             |||||||||||||| |||||||||
Sbjct: 30369 gcagagcagagcagagcagagcga 30392
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>gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, complete sequence
          Length = 180965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ggaaagaataaacagacgga 292
             ||||||||||||||||||||
Sbjct: 10931 ggaaagaataaacagacgga 10950
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>ref|XM_593715.2| PREDICTED: Bos taurus similar to CG16989-PA (LOC515657), mRNA
          Length = 3811

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 403 cagctagaagagctcccagt 422
           ||||||||||||||||||||
Sbjct: 793 cagctagaagagctcccagt 774
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>gb|AC134871.3| Mus musculus BAC clone RP23-183L19 from chromosome 3, complete sequence
          Length = 193373

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 94062 gggcagagcagagcagagcagagc 94085
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>gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, complete sequence
          Length = 167088

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   agaaagaagaaaccaagctg 363
             ||||||||||||||||||||
Sbjct: 12951 agaaagaagaaaccaagctg 12970
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>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence
          Length = 179148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    gaggaaaaggaaagaataaa 284
              ||||||||||||||||||||
Sbjct: 146299 gaggaaaaggaaagaataaa 146318
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>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence
          Length = 150235

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 30913 gaggaaaaggaaagaataaa 30894
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>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete
             sequence
          Length = 190724

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 303   tgggcagagcagagcagcgcagag 326
             ||||||||||||||||| ||||||
Sbjct: 48557 tgggcagagcagagcagagcagag 48580
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 466      cggcttcgtcgtggtggtcgcggc 489
                |||||||||||||||||| |||||
Sbjct: 17501322 cggcttcgtcgtggtggtggcggc 17501299
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>gb|AC092465.5| Homo sapiens BAC clone RP11-473L7 from 7, complete sequence
          Length = 188158

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 75644 gaggaaaaggaaagaataaa 75663
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>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence
          Length = 205242

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 78527 gaggaaaaggaaagaataaa 78508
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>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete
             sequence
          Length = 212227

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 89077 gggcagagcagagcagagcagagc 89100
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>gb|AY444343.1| Hypocrea jecorina strain QM 9414 glucose transporter (hxt1) gene,
            complete cds
          Length = 6750

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  gggcagagcagagcagcgcagagc 327
            |||||||||||||||| |||||||
Sbjct: 3739 gggcagagcagagcagggcagagc 3716
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>emb|AL031633.1|CEY39A1A Caenorhabditis elegans YAC Y39A1A, complete sequence
          Length = 110960

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgttgtgccatgaaaaatc 97
             ||||||||||||||||||||
Sbjct: 22852 atgttgtgccatgaaaaatc 22871
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>emb|BX927349.12| Zebrafish DNA sequence from clone DKEY-84K15 in linkage group 17,
              complete sequence
          Length = 159649

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     catgctattttttcatatat 79
              ||||||||||||||||||||
Sbjct: 118072 catgctattttttcatatat 118053
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>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence
          Length = 204913

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   agaaagaagaaaccaagctg 363
             ||||||||||||||||||||
Sbjct: 23244 agaaagaagaaaccaagctg 23225
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>ref|XM_724073.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00140)
           partial mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  tcacatatacatgctatttt 70
           ||||||||||||||||||||
Sbjct: 242 tcacatatacatgctatttt 223
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>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence
          Length = 201990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 20373 gaggaaaaggaaagaataaa 20354
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>gb|AC004142.2| Homo sapiens BAC clone CTB-118D7 from 7, complete sequence
          Length = 166126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     tattttttcatatatgttgt 84
              ||||||||||||||||||||
Sbjct: 124652 tattttttcatatatgttgt 124633
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>ref|XM_675354.1| Plasmodium berghei strain ANKA Pb-reticulocyte binding protein
           (PB001538.02.0) partial mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  tcacatatacatgctatttt 70
           ||||||||||||||||||||
Sbjct: 242 tcacatatacatgctatttt 223
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>emb|AL136305.14| Human DNA sequence from clone RP1-259A10 on chromosome 6p22.1-23 Contains
              the gene for an ssDNA binding protein and a CpG island,
              complete sequence
          Length = 150520

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    caccacttatttttctgcac 144
              ||||||||||||||||||||
Sbjct: 100437 caccacttatttttctgcac 100418
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>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tggatgcacgagaaagaaga 353
             ||||||||||||||||||||
Sbjct: 55246 tggatgcacgagaaagaaga 55227
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>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29
          Length = 199861

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acatgctattttttcatata 78
             ||||||||||||||||||||
Sbjct: 21360 acatgctattttttcatata 21341
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>emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, BAC clone  F24G24 (ESSA project)
          Length = 99856

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acatgctattttttcatata 78
             ||||||||||||||||||||
Sbjct: 34692 acatgctattttttcatata 34673
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>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project)
          Length = 83693

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tggatgcacgagaaagaaga 353
             ||||||||||||||||||||
Sbjct: 50110 tggatgcacgagaaagaaga 50091
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>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence
          Length = 221768

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 344    agaaagaagaaaccaagctg 363
              ||||||||||||||||||||
Sbjct: 121593 agaaagaagaaaccaagctg 121612
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>gb|AC091817.6| Homo sapiens chromosome 10 clone RP11-397P14, complete sequence
          Length = 177908

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 114    cacccaccccccaccacttatttt 137
              |||||||||||||||| |||||||
Sbjct: 109693 cacccaccccccaccagttatttt 109716
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>dbj|AK135261.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720449B21 product:NADPH cytochrome B5
            oxidoreductase, full insert sequence
          Length = 3833

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  gggcagagcagagcagcgcagagc 327
            |||||||||||||||| |||||||
Sbjct: 1754 gggcagagcagagcagagcagagc 1731
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>gb|AC090466.5| Homo sapiens chromosome 8, clone RP11-619O19, complete sequence
          Length = 191049

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 ggaaaaggaaagaataaaca 286
           ||||||||||||||||||||
Sbjct: 134 ggaaaaggaaagaataaaca 115
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>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23,
              complete sequence
          Length = 158403

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    ggcagagcagagcagcgcagagcg 328
              ||||||||||||||| ||||||||
Sbjct: 110239 ggcagagcagagcagagcagagcg 110216
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>emb|BX247880.13| Zebrafish DNA sequence from clone CH211-270J21 in linkage group 7,
             complete sequence
          Length = 141643

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    aaaaatccttcacattaaga 110
             ||||||||||||||||||||
Sbjct: 50482 aaaaatccttcacattaaga 50501
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      tatacatgctattttttcat 75
               ||||||||||||||||||||
Sbjct: 5371694 tatacatgctattttttcat 5371675
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>dbj|AK036251.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630048K15 product:thyroid
            stimulating hormone, beta subunit, full insert sequence
          Length = 4401

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  gggcagagcagagcagcgcagagc 327
            |||||||||||||||| |||||||
Sbjct: 1832 gggcagagcagagcagagcagagc 1809
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>gb|AC021546.7|AC021546 Homo sapiens chromosome 8, clone RP11-574O7, complete sequence
          Length = 207756

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   ggaaaaggaaagaataaaca 286
             ||||||||||||||||||||
Sbjct: 54454 ggaaaaggaaagaataaaca 54473
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
             complete sequence
          Length = 145356

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 344   agaaagaagaaaccaagctg 363
             ||||||||||||||||||||
Sbjct: 80855 agaaagaagaaaccaagctg 80874
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 301     tctgggcagagcagagcagcgcag 324
               ||||||||||||||||||| ||||
Sbjct: 9756923 tctgggcagagcagagcagagcag 9756900
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 305      ggcagagcagagcagcgcag 324
                ||||||||||||||||||||
Sbjct: 25687363 ggcagagcagagcagcgcag 25687382
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 466      cggcttcgtcgtggtggtcgcggc 489
                |||||||||||||||||| |||||
Sbjct: 17494863 cggcttcgtcgtggtggtggcggc 17494840
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>gb|AC154775.2| Mus musculus BAC clone RP23-100F7 from chromosome 16, complete sequence
          Length = 192492

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 304    gggcagagcagagcagcgcagagc 327
              |||||||||||||||| |||||||
Sbjct: 156919 gggcagagcagagcagagcagagc 156942
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>gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N17, complete sequence
          Length = 145152

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 43850 gggcagagcagagcagagcagagc 43827
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>gb|AC104076.5| Homo sapiens BAC clone RP11-397C2 from 2, complete sequence
          Length = 174622

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 15848 gaggaaaaggaaagaataaa 15867
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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    gggcagagcagagcagcgcagagc 327
              |||||||||||||||| |||||||
Sbjct: 138418 gggcagagcagagcagggcagagc 138395
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>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I,
             complete sequence
          Length = 87508

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    acatgctattttttcatata 78
             ||||||||||||||||||||
Sbjct: 49812 acatgctattttttcatata 49793
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0594D10
          Length = 143200

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    ggcagagcagagcagcgcag 324
              ||||||||||||||||||||
Sbjct: 141336 ggcagagcagagcagcgcag 141355
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0524E08
          Length = 154696

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  ggcagagcagagcagcgcag 324
            ||||||||||||||||||||
Sbjct: 4525 ggcagagcagagcagcgcag 4544
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>ref|XM_310392.2| Anopheles gambiae str. PEST ENSANGP00000018924
           (ENSANGG00000016435), partial mRNA
          Length = 682

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 aaccatcgaggaaaaggaaa 277
           ||||||||||||||||||||
Sbjct: 499 aaccatcgaggaaaaggaaa 518
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>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
          Length = 83922

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    acatgctattttttcatata 78
             ||||||||||||||||||||
Sbjct: 12249 acatgctattttttcatata 12268
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 301     tctgggcagagcagagcagcgcag 324
               ||||||||||||||||||| ||||
Sbjct: 9756808 tctgggcagagcagagcagagcag 9756785
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>gb|AC156793.3| Mus musculus BAC clone RP24-148D3 from chromosome 9, complete sequence
          Length = 198338

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 19629 gggcagagcagagcagagcagagc 19652
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>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 301   tctgggcagagcagagcagcgcag 324
             ||||||||||||||||||| ||||
Sbjct: 82880 tctgggcagagcagagcagagcag 82857
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>emb|CT010567.11| Mouse DNA sequence from clone RP23-387D5 on chromosome 16, complete
             sequence
          Length = 178874

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 91298 gggcagagcagagcagagcagagc 91275
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>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence
          Length = 205622

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   gaggaaaaggaaagaataaa 284
             ||||||||||||||||||||
Sbjct: 76263 gaggaaaaggaaagaataaa 76244
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>gb|AC145305.4| Mus musculus BAC clone RP23-129K15 from 8, complete sequence
          Length = 196153

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    ttaagacaccacccaccccccacc 128
              |||||||||||||| |||||||||
Sbjct: 142670 ttaagacaccaccccccccccacc 142647
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>gb|DQ280421.1| Rhynchosporium secalis microsatellite srs13tctg sequence
          Length = 108

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 304 gggcagagcagagcagcgcagagc 327
           |||||||||||||||| |||||||
Sbjct: 47  gggcagagcagagcagagcagagc 24
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>emb|AL645477.8| Mouse DNA sequence from clone RP23-155L18 on chromosome X, complete
             sequence
          Length = 189131

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccaccccccaccacttattt 136
             ||||||||||||||||||||
Sbjct: 73748 ccaccccccaccacttattt 73767
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>emb|AL671900.5| Mouse DNA sequence from clone RP23-282O5 on chromosome X, complete
              sequence
          Length = 185389

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 113    ccacccaccccccaccacttattt 136
              |||||| |||||||||||||||||
Sbjct: 150362 ccaccctccccccaccacttattt 150385
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>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete
             sequence
          Length = 203992

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gggcagagcagagcagcgcagagc 327
             |||||||||||||||| |||||||
Sbjct: 33342 gggcagagcagagcagagcagagc 33319


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,088,454
Number of Sequences: 3902068
Number of extensions: 5088454
Number of successful extensions: 115540
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115163
Number of HSP's gapped (non-prelim): 361
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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