ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart17a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009387.1| Triticum aestivum clone wlm96.pk035.d7:fis, full insert mRNA sequence Length = 1805 Score = 658 bits (332), Expect = 0.0 Identities = 375/389 (96%), Gaps = 4/389 (1%) Strand = Plus / Minus Query: 144 ttagctaccatgtacacaaaaga----gctagcggcccattttgctgttcgatcacctgc 199 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1660 ttagctaccatgtacacaaaagaaagagctagcggcccattttgctgatcgatcacctgc 1601 Query: 200 tattggcaaatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctggg 259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1600 tgttggcaaatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctggc 1541 Query: 260 ccttggccatcgccagcctctggtagttacccttgaagtacttctggccccagaccatcc 319 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1540 ccttggccatcgcgagcctctggtagttgcccttgaagtacttctggccccagaccatcc 1481 Query: 320 cggcctggaagctgctgacgttgccgacgacgacgttctcgccgaggtccaggtccctgt 379 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 cggcctggtagctgctcacgttgccgacgacgacgttctcgccgaggtccaggtccctgt 1421 Query: 380 agttgaagtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaact 439 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1420 agttgaagtaggcctccctcgggttggagctcacgaacggcgccatgaacgcgtagaact 1361 Query: 440 ccctgatccacctggtctgcacggccccgtcccccgacgccatcgaccagaagttcatgt 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1360 ccctgatccacctggtctgcacggccccgtcccccgacgccatcgaccagaagttcatgt 1301 Query: 500 actggatgttgtacagcacgccggcgcgg 528 ||||||||||||| ||||||||||||||| Sbjct: 1300 actggatgttgtagagcacgccggcgcgg 1272 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 79 attgtggtaagcaatcacaaaccagcatcaacaaatacatgtacaaataaagttaaatat 138 |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1740 attgtggtaagcaatctcaaaccaatatcaacaaatacatgtacaaataaagataaatgt 1681 Query: 139 gta 141 ||| Sbjct: 1680 gta 1678
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 226 bits (114), Expect = 6e-56 Identities = 212/244 (86%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccat 269 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 20485045 tggcgggatgctctgctcgttcctgaagtagtcgtcggcgtcgatctgcgccttggccat 20485104 Query: 270 cgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctggaa 329 || |||| ||||||||| ||| |||||||||||| ||||| ||| | ||||| | | | Sbjct: 20485105 ggcgagccgctggtagttccccctgaagtacttctccccccacaccttgccggcgtcgta 20485164 Query: 330 gctgctgacgttgc---cgacgacgacgttctcgccgaggtccaggtccctgtagttgaa 386 |||||||||| || || |||| ||||||||||||||||||||||||||||||||| Sbjct: 20485165 gctgctgacgccgccggcgccgaccacgttctcgccgaggtccaggtccctgtagttggc 20485224 Query: 387 gtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactccctgat 446 ||| || ||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 20485225 gtacgcctccctcgggtccttgctcacgaacggcgccatgaacgcgtagaagtccctgat 20485284 Query: 447 ccac 450 |||| Sbjct: 20485285 ccac 20485288 Score = 91.7 bits (46), Expect = 2e-15 Identities = 198/249 (79%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 208 aatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggcc 267 ||||| || ||||||||||||||||||||| ||||| ||| || | || |||||| | | Sbjct: 20420267 aatggaggaatgctctgctcgttcctgaagaagtcggtgggatccaccttggccttcgtc 20420326 Query: 268 atcgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctgg 327 | || ||||||| | |||| |||||||||||||||| |||||| ||| | ||| ||||| Sbjct: 20420327 ctggcgagcctctcgaagttgcccttgaagtacttctcgccccacaccttgccgacctgg 20420386 Query: 328 aagctgctgacgttgccgacg------acgacgttctcgccgaggtccaggtccctgtag 381 ||| | ||||||| || || ||| |||| |||||||||| |||||||||||| Sbjct: 20420387 tagcaggagacgttggcgccggcctcgacggcgttgacgccgaggtcgaggtccctgtag 20420446 Query: 382 ttgaagtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactcc 441 |||| ||| || | ||||||| | | | ||| ||||| |||||||||||||||| ||| Sbjct: 20420447 ttgacgtacgcctgcctcgggttcttggtgacgtacggctccatgaacgcgtagaagtcc 20420506 Query: 442 ctgatccac 450 ||||||||| Sbjct: 20420507 ctgatccac 20420515 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 206 caaatggcgggatgctctgctcgttcctgaagtagtcg 243 |||||||||||||||||||||||||||||||||||||| Sbjct: 20436758 caaatggcgggatgctctgctcgttcctgaagtagtcg 20436795 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 486 ccagaagttcatgtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 20485330 ccagaagttcatgtactggatgttgtagagcacgccgccgcgg 20485372 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcg 243 |||||||||||||||||||||| |||||||||| Sbjct: 20460574 ggcgggatgctctgctcgttccggaagtagtcg 20460606 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggc 392 ||||| |||||||||| |||||||||||||||| |||||| Sbjct: 20403658 cgttcacgccgaggtcgaggtccctgtagttgacgtaggc 20403697 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggcttccctcgggctggagctca 412 |||||||||||| ||||||||||| | |||| | ||| || ||||||||| | ||| | Sbjct: 20436908 cgttctcgccgatgtccaggtcccggaagttcacgtacgcctccctcgggtcgctgctga 20436967 Query: 413 cgaacggcgccatgaacgcgta 434 || ||||| ||||||||||||| Sbjct: 20436968 cgtacggctccatgaacgcgta 20436989 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggcttccctcgggctggagctca 412 |||||||||||| ||| ||||| | |||||| | ||| || ||||||||| || | | | Sbjct: 20460719 cgttctcgccgatgtcgaggtcgcggtagttcacgtacgcatccctcgggttgctggtga 20460778 Query: 413 cgaacggcgccatgaacgcgt 433 |||||||| |||||||||||| Sbjct: 20460779 cgaacggctccatgaacgcgt 20460799 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 485 accagaagttcatgtactggatgttgtacagca 517 |||||||| | |||||||||||||||||||||| Sbjct: 20420550 accagaaggtgatgtactggatgttgtacagca 20420582 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 496 atgtactggatgttgtacagcacgccg 522 |||||||||||||||||||| |||||| Sbjct: 20437042 atgtactggatgttgtacaggacgccg 20437068 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 atgtactggatgttgtacagcacgcc 521 |||||||||||||||||||| ||||| Sbjct: 20464996 atgtactggatgttgtacaggacgcc 20465021 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 atgctctgctcgttcctgaagtagt 241 ||||||||||||||| ||||||||| Sbjct: 20403507 atgctctgctcgttcttgaagtagt 20403531
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 226 bits (114), Expect = 6e-56 Identities = 212/244 (86%), Gaps = 3/244 (1%) Strand = Plus / Plus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccat 269 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 57340 tggcgggatgctctgctcgttcctgaagtagtcgtcggcgtcgatctgcgccttggccat 57399 Query: 270 cgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctggaa 329 || |||| ||||||||| ||| |||||||||||| ||||| ||| | ||||| | | | Sbjct: 57400 ggcgagccgctggtagttccccctgaagtacttctccccccacaccttgccggcgtcgta 57459 Query: 330 gctgctgacgttgc---cgacgacgacgttctcgccgaggtccaggtccctgtagttgaa 386 |||||||||| || || |||| ||||||||||||||||||||||||||||||||| Sbjct: 57460 gctgctgacgccgccggcgccgaccacgttctcgccgaggtccaggtccctgtagttggc 57519 Query: 387 gtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactccctgat 446 ||| || ||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 57520 gtacgcctccctcgggtccttgctcacgaacggcgccatgaacgcgtagaagtccctgat 57579 Query: 447 ccac 450 |||| Sbjct: 57580 ccac 57583 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 206 caaatggcgggatgctctgctcgttcctgaagtagtcg 243 |||||||||||||||||||||||||||||||||||||| Sbjct: 9053 caaatggcgggatgctctgctcgttcctgaagtagtcg 9090 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 486 ccagaagttcatgtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 57625 ccagaagttcatgtactggatgttgtagagcacgccgccgcgg 57667 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcg 243 |||||||||||||||||||||| |||||||||| Sbjct: 32869 ggcgggatgctctgctcgttccggaagtagtcg 32901 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggcttccctcgggctggagctca 412 |||||||||||| ||||||||||| | |||| | ||| || ||||||||| | ||| | Sbjct: 9203 cgttctcgccgatgtccaggtcccggaagttcacgtacgcctccctcgggtcgctgctga 9262 Query: 413 cgaacggcgccatgaacgcgta 434 || ||||| ||||||||||||| Sbjct: 9263 cgtacggctccatgaacgcgta 9284 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggcttccctcgggctggagctca 412 |||||||||||| ||| ||||| | |||||| | ||| || ||||||||| || | | | Sbjct: 33014 cgttctcgccgatgtcgaggtcgcggtagttcacgtacgcatccctcgggttgctggtga 33073 Query: 413 cgaacggcgccatgaacgcgt 433 |||||||| |||||||||||| Sbjct: 33074 cgaacggctccatgaacgcgt 33094 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 496 atgtactggatgttgtacagcacgccg 522 |||||||||||||||||||| |||||| Sbjct: 9337 atgtactggatgttgtacaggacgccg 9363 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 496 atgtactggatgttgtacagcacgcc 521 |||||||||||||||||||| ||||| Sbjct: 37291 atgtactggatgttgtacaggacgcc 37316
>dbj|AK109673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B05, full insert sequence Length = 1972 Score = 226 bits (114), Expect = 6e-56 Identities = 212/244 (86%), Gaps = 3/244 (1%) Strand = Plus / Minus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccat 269 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1627 tggcgggatgctctgctcgttcctgaagtagtcgtcggcgtcgatctgcgccttggccat 1568 Query: 270 cgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctggaa 329 || |||| ||||||||| ||| |||||||||||| ||||| ||| | ||||| | | | Sbjct: 1567 ggcgagccgctggtagttccccctgaagtacttctccccccacaccttgccggcgtcgta 1508 Query: 330 gctgctgacgttgc---cgacgacgacgttctcgccgaggtccaggtccctgtagttgaa 386 |||||||||| || || |||| ||||||||||||||||||||||||||||||||| Sbjct: 1507 gctgctgacgccgccggcgccgaccacgttctcgccgaggtccaggtccctgtagttggc 1448 Query: 387 gtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactccctgat 446 ||| || ||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 1447 gtacgcctccctcgggtccttgctcacgaacggcgccatgaacgcgtagaagtccctgat 1388 Query: 447 ccac 450 |||| Sbjct: 1387 ccac 1384 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 486 ccagaagttcatgtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 1342 ccagaagttcatgtactggatgttgtagagcacgccgccgcgg 1300
>gb|AY451241.1| Cynodon dactylon FAD-linked oxidoreductase BG60 mRNA, complete cds Length = 1569 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Minus Query: 208 aatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggcc 267 |||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| | Sbjct: 1562 aatggcgggatgctctgctcattcctgaagtagtcttcggggtcgatcttacccttggtc 1503 Query: 268 atcgccagcctctggtagttacccttgaagtacttct 304 | || ||||||| | |||| |||||||||||||||| Sbjct: 1502 ctggcgagcctctcgaagttgcccttgaagtacttct 1466
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 91.7 bits (46), Expect = 2e-15 Identities = 198/249 (79%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 208 aatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggcc 267 ||||| || ||||||||||||||||||||| ||||| ||| || | || |||||| | | Sbjct: 143662 aatggaggaatgctctgctcgttcctgaagaagtcggtgggatccaccttggccttcgtc 143721 Query: 268 atcgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctgg 327 | || ||||||| | |||| |||||||||||||||| |||||| ||| | ||| ||||| Sbjct: 143722 ctggcgagcctctcgaagttgcccttgaagtacttctcgccccacaccttgccgacctgg 143781 Query: 328 aagctgctgacgttgccgacg------acgacgttctcgccgaggtccaggtccctgtag 381 ||| | ||||||| || || ||| |||| |||||||||| |||||||||||| Sbjct: 143782 tagcaggagacgttggcgccggcctcgacggcgttgacgccgaggtcgaggtccctgtag 143841 Query: 382 ttgaagtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactcc 441 |||| ||| || | ||||||| | | | ||| ||||| |||||||||||||||| ||| Sbjct: 143842 ttgacgtacgcctgcctcgggttcttggtgacgtacggctccatgaacgcgtagaagtcc 143901 Query: 442 ctgatccac 450 ||||||||| Sbjct: 143902 ctgatccac 143910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggc 392 ||||| |||||||||| |||||||||||||||| |||||| Sbjct: 127053 cgttcacgccgaggtcgaggtccctgtagttgacgtaggc 127092 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 485 accagaagttcatgtactggatgttgtacagca 517 |||||||| | |||||||||||||||||||||| Sbjct: 143945 accagaaggtgatgtactggatgttgtacagca 143977 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 atgctctgctcgttcctgaagtagt 241 ||||||||||||||| ||||||||| Sbjct: 126902 atgctctgctcgttcttgaagtagt 126926
>dbj|AK072611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A01, full insert sequence Length = 2030 Score = 91.7 bits (46), Expect = 2e-15 Identities = 198/249 (79%), Gaps = 6/249 (2%) Strand = Plus / Minus Query: 208 aatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggcc 267 ||||| || ||||||||||||||||||||| ||||| ||| || | || |||||| | | Sbjct: 1599 aatggaggaatgctctgctcgttcctgaagaagtcggtgggatccaccttggccttcgtc 1540 Query: 268 atcgccagcctctggtagttacccttgaagtacttctggccccagaccatcccggcctgg 327 | || ||||||| | |||| |||||||||||||||| |||||| ||| | ||| ||||| Sbjct: 1539 ctggcgagcctctcgaagttgcccttgaagtacttctcgccccacaccttgccgacctgg 1480 Query: 328 aagctgctgacgttgccgacg------acgacgttctcgccgaggtccaggtccctgtag 381 ||| | ||||||| || || ||| |||| |||||||||| |||||||||||| Sbjct: 1479 tagcaggagacgttggcgccggcctcgacggcgttgacgccgaggtcgaggtccctgtag 1420 Query: 382 ttgaagtaggcttccctcgggctggagctcacgaacggcgccatgaacgcgtagaactcc 441 |||| ||| || | ||||||| | | | ||| ||||| |||||||||||||||| ||| Sbjct: 1419 ttgacgtacgcctgcctcgggttcttggtgacgtacggctccatgaacgcgtagaagtcc 1360 Query: 442 ctgatccac 450 ||||||||| Sbjct: 1359 ctgatccac 1351 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 485 accagaagttcatgtactggatgttgtacagca 517 |||||||| | |||||||||||||||||||||| Sbjct: 1316 accagaaggtgatgtactggatgttgtacagca 1284
>emb|AJ512488.2|PPR512488 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele B1 Length = 1580 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 ||||||||||||||||||||||||||||||||| || |||| || | |||||| || Sbjct: 1508 ggcgggatgctctgctcgttcctgaagtagtcggtaggatcgaccttgcccttggtaatg 1449 Query: 271 gccagcctctggtagttacccttgaagtacttctggccccagacc 315 || ||||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 1448 gcgagcctctcgaagttgcccttgaagtatttctggccccagacc 1404
>gb|DQ251188.1| Phleum pratense major pollen allergen Phl p 4 precursor, mRNA, complete cds Length = 1741 Score = 89.7 bits (45), Expect = 9e-15 Identities = 90/105 (85%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 ||||||||||||||||||||||||||||||||| || |||| || | |||||| || Sbjct: 1594 ggcgggatgctctgctcgttcctgaagtagtcggtaggatcgaccttgcccttggtaatg 1535 Query: 271 gccagcctctggtagttacccttgaagtacttctggccccagacc 315 || ||||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 1534 gcgagcctctcgaagttgcccttgaagtatttctggccccagacc 1490
>gb|AY105422.1| Zea mays PCO091928 mRNA sequence Length = 664 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 208 aatggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggcc 267 |||||||||||||||||||||||||||||||||||| |||||| | || |||||| | | Sbjct: 144 aatggcgggatgctctgctcgttcctgaagtagtcgcaggggtccaccttggccttagtc 85 Query: 268 atcgccagcctctggtagttacccttgaagtacttctggccccagacc 315 | || ||||||| | |||| || ||| ||||||||| |||||||||| Sbjct: 84 ctggcgagcctctcgaagttgccattgtagtacttctcgccccagacc 37
>emb|AJ512487.2|PPR512487 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele A1 Length = 1567 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 ||||||||||||||||||||||||||||||||| ||| || | || | |||||| || Sbjct: 1508 ggcgggatgctctgctcgttcctgaagtagtcggtgggatccaccttgcccttggtgatg 1449 Query: 271 gccagcctctggtagttacccttgaagtacttctggccccagacca 316 || ||||||||| | || ||||||||||| ||||||||||| |||| Sbjct: 1448 gcgagcctctggaaattgcccttgaagtatttctggccccacacca 1403
>emb|AJ862834.1| Hordeum vulgare partial horv4 gene for pollen allergen Hor v 4 Length = 1608 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 |||||||||||||||||||||||||||||||| | ||| || | || | |||||| || Sbjct: 1541 ggcgggatgctctgctcgttcctgaagtagtcctggggatccaccttgcccttggtgatg 1482 Query: 271 gccagcctctggtagttacccttgaagtacttctggcccca 311 || ||||| ||| |||| |||||||||||||||| |||||| Sbjct: 1481 gcgagcctttggaagttgcccttgaagtacttctcgcccca 1441
>emb|AJ862831.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele B Length = 1644 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 |||||||||||||||||||||||||||||||| | || || | || | |||||| || Sbjct: 1547 ggcgggatgctctgctcgttcctgaagtagtcctgaggatccaccttgcccttggtaatg 1488 Query: 271 gccagcctctggtagttacccttgaagtacttctggccccagacc 315 || ||||| ||| |||| |||||||||||||||| |||||||||| Sbjct: 1487 gcgagcctttggaagttgcccttgaagtacttctcgccccagacc 1443
>emb|AJ862832.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele A Length = 1603 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 |||||||||||||||||||||||||||||||| | || || | || | |||||| || Sbjct: 1538 ggcgggatgctctgctcgttcctgaagtagtcctgaggatccaccttgcccttggtaata 1479 Query: 271 gccagcctctggtagttacccttgaagtacttctggcccca 311 || ||||| ||| |||| |||||||||||||||| |||||| Sbjct: 1478 gcgagcctttggaagttgcccttgaagtacttctcgcccca 1438
>emb|AJ862830.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele A Length = 1603 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccat 269 ||||||||||||||||||||||||||||||||| | || || | || | |||||| || Sbjct: 1539 tggcgggatgctctgctcgttcctgaagtagtcctgaggatccaccttgcccttggtaat 1480 Query: 270 cgccagcctctggtagttacccttgaagtacttct 304 || ||||| ||| |||| |||||||||||||||| Sbjct: 1479 ggcgagcctttggaagttgcccttgaagtacttct 1445
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 498 gtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||||||| Sbjct: 73439 gtactggatgttgtacagcacgccggcgcgg 73469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggg 248 ||||||||||||||||||||| | |||||||||| |||| Sbjct: 73145 tggcgggatgctctgctcgttgcggaagtagtcgccggg 73183
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 498 gtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||||||| Sbjct: 17005832 gtactggatgttgtacagcacgccggcgcgg 17005862 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggg 248 ||||||||||||||||||||| | |||||||||| |||| Sbjct: 17005538 tggcgggatgctctgctcgttgcggaagtagtcgccggg 17005576
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 498 gtactggatgttgtacagcacgccggcgcgg 528 ||||||||||||||||||||||||||||||| Sbjct: 17100484 gtactggatgttgtacagcacgccggcgcgg 17100514 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 210 tggcgggatgctctgctcgttcctgaagtagtcgtcggg 248 ||||||||||||||||||||| | |||||||||| |||| Sbjct: 17100190 tggcgggatgctctgctcgttgcggaagtagtcgccggg 17100228
>dbj|AK073505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H14, full insert sequence Length = 1813 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcg 243 |||||||||||||||||||||| |||||||||| Sbjct: 1613 ggcgggatgctctgctcgttccggaagtagtcg 1581 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Minus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggcttccctcgggctggagctca 412 |||||||||||| ||| ||||| | |||||| | ||| || ||||||||| || | | | Sbjct: 1468 cgttctcgccgatgtcgaggtcgcggtagttcacgtacgcatccctcgggttgctggtga 1409 Query: 413 cgaacggcgccatgaacgcgt 433 |||||||| |||||||||||| Sbjct: 1408 cgaacggctccatgaacgcgt 1388
>dbj|AK105176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H12, full insert sequence Length = 1757 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 353 cgttctcgccgaggtccaggtccctgtagttgaagtaggc 392 ||||| |||||||||| |||||||||||||||| |||||| Sbjct: 1478 cgttcacgccgaggtcgaggtccctgtagttgacgtaggc 1439 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 atgctctgctcgttcctgaagtagt 241 ||||||||||||||| ||||||||| Sbjct: 1629 atgctctgctcgttcttgaagtagt 1605
>emb|AJ862833.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele B Length = 1603 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Minus Query: 211 ggcgggatgctctgctcgttcctgaagtagtcgtcggggtcgatctgggccttggccatc 270 ||||||||||| ||||| |||||||||||||| | || || | || | |||||| || Sbjct: 1538 ggcgggatgctttgctcattcctgaagtagtcctgaggatctaccttgcccttggtaatg 1479 Query: 271 gccagcctctggtagttacccttgaagtacttctggcccca 311 || ||||| ||| |||| | |||||||||||||| |||||| Sbjct: 1478 gcgagcctttggaagttgctcttgaagtacttctcgcccca 1438
>gb|BT009471.1| Triticum aestivum clone wr1.pk0028.b10:fis, full insert mRNA sequence Length = 588 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 214 gggatgctctgctcgttcctgaagtagtc 242 ||||||||||||||||| ||||||||||| Sbjct: 387 gggatgctctgctcgtttctgaagtagtc 359
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tacaaatacatgtacacatataccaca 75 |||| |||||||||||||||||||||| Sbjct: 3486070 tacatatacatgtacacatataccaca 3486096
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence Length = 155873 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatata 70 ||||||||||||||||||||||| Sbjct: 43499 atacaaatacatgtacacatata 43521
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tacaaatacatgtacacatataccaca 75 |||| |||||||||||||||||||||| Sbjct: 119489 tacatatacatgtacacatataccaca 119515
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tacaaatacatgtacacatataccaca 75 |||| |||||||||||||||||||||| Sbjct: 41787 tacatatacatgtacacatataccaca 41813
>dbj|AP004897.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT01P23, TM0047a, complete sequence Length = 16512 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 284 agttacccttgaagtacttctggccccagac 314 |||| |||||||||||||||| ||||||||| Sbjct: 4817 agtttcccttgaagtacttcttgccccagac 4787
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 gtcggggtcgatctgggccttggcca 268 |||| ||||||||||||||||||||| Sbjct: 178232 gtcgcggtcgatctgggccttggcca 178207
>ref|XM_868508.1| PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein U (LOC616476), mRNA Length = 3125 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 aagtacttctggccccagacca 316 |||||||||||||||||||||| Sbjct: 1189 aagtacttctggccccagacca 1168
>ref|XM_842911.1| Leishmania major strain Friedlin cysteine peptidase, clan CA, family C2 (LMJ_0306) partial mRNA Length = 18495 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 gtcggggtcgatctgggccttggcca 268 |||| ||||||||||||||||||||| Sbjct: 13347 gtcgcggtcgatctgggccttggcca 13322
>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4 Length = 1272 Score = 44.1 bits (22), Expect = 0.46 Identities = 37/42 (88%) Strand = Plus / Minus Query: 274 agcctctggtagttacccttgaagtacttctggccccagacc 315 ||||||| | ||||||||||||| || ||||| ||||||||| Sbjct: 1221 agcctctcgaagttacccttgaaatatttctgtccccagacc 1180
>emb|CR376739.10| Zebrafish DNA sequence from clone CH211-44M2 in linkage group 24, complete sequence Length = 163471 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 acaaataaagttaaatatgtaa 142 |||||||||||||||||||||| Sbjct: 127096 acaaataaagttaaatatgtaa 127117
>gb|AC128669.4| Mus musculus BAC clone RP24-115D21 from chromosome 17, complete sequence Length = 169571 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatatac 71 |||||||||||||||||||||| Sbjct: 131641 acaaatacatgtacacatatac 131662
>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence Length = 191821 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 acaaatacatgtacaaataaag 130 |||||||||||||||||||||| Sbjct: 117256 acaaatacatgtacaaataaag 117235
>emb|BX571855.11| Zebrafish DNA sequence from clone DKEY-260N18 in linkage group 9, complete sequence Length = 114407 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 acaaataaagttaaatatgtaa 142 |||||||||||||||||||||| Sbjct: 98498 acaaataaagttaaatatgtaa 98477
>gb|AC158648.2| Mus musculus 6 BAC RP23-431M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205189 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatatac 71 |||||||||||||||||||||| Sbjct: 157123 acaaatacatgtacacatatac 157144
>gb|AC155836.5| Mus musculus 6 BAC RP24-511F13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147664 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatatac 71 |||||||||||||||||||||| Sbjct: 70219 acaaatacatgtacacatatac 70240
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatatac 71 |||||||||||||||||||||| Sbjct: 1186406 acaaatacatgtacacatatac 1186427
>ref|XM_474178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 612 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 actccctgatccacctggtct 457 ||||||||||||||||||||| Sbjct: 100 actccctgatccacctggtct 80
>gb|AC124187.3| Mus musculus BAC clone RP23-237I24 from 18, complete sequence Length = 172828 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatacc 72 ||||| ||||||||||||||||||| Sbjct: 139199 atacatatacatgtacacatatacc 139175
>emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chromosome 6, complete sequence Length = 205043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 acaaatacatgtacacatata 70 ||||||||||||||||||||| Sbjct: 35244 acaaatacatgtacacatata 35224
>emb|AL157937.21| Human DNA sequence from clone RP11-408N14 on chromosome 9 Contains a novel gene, complete sequence Length = 153783 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 agatacaaatacatgtacacatata 70 ||||||| ||||||||||||||||| Sbjct: 36625 agatacatatacatgtacacatata 36649
>emb|BX936405.7| Zebrafish DNA sequence from clone CH211-155J8 in linkage group 3, complete sequence Length = 134507 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 acaaataaagttaaatatgta 141 ||||||||||||||||||||| Sbjct: 58395 acaaataaagttaaatatgta 58415
>emb|BX072554.8| Zebrafish DNA sequence from clone DKEY-61M24 in linkage group 7, complete sequence Length = 190879 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 ttctggccccagaccatcccg 321 ||||||||||||||||||||| Sbjct: 132831 ttctggccccagaccatcccg 132811
>gb|AC154324.2| Mus musculus BAC clone RP24-494E12 from chromosome 14, complete sequence Length = 198197 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacata 68 ||||||||||||||||||||| Sbjct: 86864 atacaaatacatgtacacata 86844
>gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, complete sequence Length = 196331 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 caaataaagttaaatatgtaa 142 ||||||||||||||||||||| Sbjct: 61401 caaataaagttaaatatgtaa 61381
>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence Length = 161586 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 acaaataaagttaaatatgta 141 ||||||||||||||||||||| Sbjct: 114571 acaaataaagttaaatatgta 114551
>gb|AC090751.9| Homo sapiens chromosome 15, clone RP11-331H13, complete sequence Length = 207888 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 acaaataaagttaaatatgta 141 ||||||||||||||||||||| Sbjct: 19380 acaaataaagttaaatatgta 19360
>ref|XM_687263.1| PREDICTED: Danio rerio similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC563900), mRNA Length = 10836 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ttctggccccagaccatcccg 321 ||||||||||||||||||||| Sbjct: 8642 ttctggccccagaccatcccg 8662
>dbj|AK085003.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430023B02 product:unclassifiable, full insert sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 caaataaagttaaatatgtaa 142 ||||||||||||||||||||| Sbjct: 1132 caaataaagttaaatatgtaa 1112
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 actccctgatccacctggtct 457 ||||||||||||||||||||| Sbjct: 33545587 actccctgatccacctggtct 33545567 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 acgaacggcgccatgaacgc 431 |||||||||||||||||||| Sbjct: 23053386 acgaacggcgccatgaacgc 23053405
>gb|AC022471.8|AC022471 Genomic Sequence For Homo sapiens Clone 202M16 From Chromosome VI, complete sequence Length = 92144 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 agatacaaatacatgtacacatata 70 ||||||| ||||||||||||||||| Sbjct: 16422 agatacatatacatgtacacatata 16446
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 cccttgaagtacttctggccccaga 313 |||| |||||||||||||||||||| Sbjct: 4035378 ccctcgaagtacttctggccccaga 4035354
>emb|BX323812.10| Zebrafish DNA sequence from clone CH211-150H8 in linkage group 2, complete sequence Length = 153556 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 ttctggccccagaccatcccg 321 ||||||||||||||||||||| Sbjct: 6242 ttctggccccagaccatcccg 6262
>emb|AJ250017.1|MAV250017 Mycobacterium avium subsp. paratuberculosis insertion sequence IS900, Locus 3 Length = 2549 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 gatgttgtacagcacgccggc 524 ||||||||||||||||||||| Sbjct: 100 gatgttgtacagcacgccggc 120
>gb|AC121513.15| Mus musculus chromosome 18, clone RP24-391B9, complete sequence Length = 160247 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatacc 72 ||||| ||||||||||||||||||| Sbjct: 115346 atacatatacatgtacacatatacc 115370
>gb|U43400.1|HHU43400 Human herpesvirus-7 (HHV7) JI, complete virion genome Length = 144861 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 aaatacatgtacaaataaagttaaa 135 |||||||||||||||||| |||||| Sbjct: 130372 aaatacatgtacaaataaggttaaa 130348
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 gatgttgtacagcacgccggc 524 ||||||||||||||||||||| Sbjct: 1935626 gatgttgtacagcacgccggc 1935606
>gb|AF037218.1| Human herpesvirus 7 strain RK, complete genome Length = 153080 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 aaatacatgtacaaataaagttaaa 135 |||||||||||||||||| |||||| Sbjct: 134601 aaatacatgtacaaataaggttaaa 134577
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 actccctgatccacctggtct 457 ||||||||||||||||||||| Sbjct: 121876 actccctgatccacctggtct 121856
>gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, complete sequence Length = 196761 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 180777 atacatatacatgtacacatatac 180754
>gb|AC119870.17| Mus musculus chromosome 3, clone RP24-261K17, complete sequence Length = 144502 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 11643 atacatatacatgtacacatatac 11620
>gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome 13, complete sequence Length = 211603 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||||||||||| |||||||||| Sbjct: 60235 atacaaatacatgcacacatatac 60212
>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence Length = 210846 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 |||||| ||||||||||||||||| Sbjct: 209566 atacaattacatgtacacatatac 209543
>ref|XM_472757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2502 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 acgaacggcgccatgaacgc 431 |||||||||||||||||||| Sbjct: 2264 acgaacggcgccatgaacgc 2245
>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence Length = 167235 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 12938 atacacatacatgtacacatatac 12915
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gatgctctgctcgttcctga 235 |||||||||||||||||||| Sbjct: 328946 gatgctctgctcgttcctga 328965
>gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, complete sequence Length = 207359 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 187475 atacacatacatgtacacatatac 187452
>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence Length = 176237 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||||||||||||||| |||||| Sbjct: 85667 atacaaatacatgtacatatatac 85644
>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence Length = 131587 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ttagctaccatgtacacaaa 163 |||||||||||||||||||| Sbjct: 77235 ttagctaccatgtacacaaa 77254
>gb|AY973971.1| Leishmania major excreted/secreted protein 31 mRNA, complete cds Length = 3834 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ctggaagctgctgacgttgc 343 |||||||||||||||||||| Sbjct: 3460 ctggaagctgctgacgttgc 3479
>gb|AC149299.1| Populus trichocarpa clone Pop1-037B22, complete sequence Length = 143392 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 gggatgctctgctcgttcctgaag 237 |||||||||||||| ||||||||| Sbjct: 72248 gggatgctctgctcattcctgaag 72225
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 103897 atacacatacatgtacacatatac 103920
>gb|AC140232.2| Mus musculus BAC clone RP24-498F17 from chromosome 5, complete sequence Length = 183612 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 acatgtacacatataccaca 75 |||||||||||||||||||| Sbjct: 32475 acatgtacacatataccaca 32494
>gb|AC161055.2| Mus musculus BAC clone RP23-287L7 from chromosome 12, complete sequence Length = 189803 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 40634 atacatatacatgtacacatatac 40657
>gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196622 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 |||||||||||| ||||||||||| Sbjct: 105965 atacaaatacatatacacatatac 105942
>gb|AC162887.5| Mus musculus chromosome 19, clone RP23-414O6, complete sequence Length = 190704 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 112304 atacacatacatgtacacatatac 112281
>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence Length = 199655 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 52913 acaaatacatgtacacatat 52894
>gb|AC146150.3| Pan troglodytes BAC clone RP43-2A23 from 7, complete sequence Length = 71347 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 acatgtacacatataccaca 75 |||||||||||||||||||| Sbjct: 745 acatgtacacatataccaca 726
>gb|AC146232.2| Pan troglodytes BAC clone RP43-27C6 from 7, complete sequence Length = 169663 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgtacaaataaagttaaata 137 |||||||||||||||||||| Sbjct: 124399 tgtacaaataaagttaaata 124418
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence Length = 200841 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tacaaatacatgtacacata 68 |||||||||||||||||||| Sbjct: 167036 tacaaatacatgtacacata 167017
>gb|AC123553.4| Mus musculus BAC clone RP24-566O21 from chromosome 3, complete sequence Length = 138553 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 27375 acaaatacatgtacacatat 27356
>gb|AC087329.10| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-383N15, Complete Sequence, complete sequence Length = 219559 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 acatgtacacatataccaca 75 |||||||||||||||||||| Sbjct: 210071 acatgtacacatataccaca 210090
>gb|AC122393.3| Mus musculus BAC clone RP24-83E21 from chromosome 15, complete sequence Length = 223656 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atacatgtacacatatacca 73 |||||||||||||||||||| Sbjct: 117315 atacatgtacacatatacca 117296
>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence Length = 185398 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 |||||| ||||||||||||||||| Sbjct: 135312 atacaattacatgtacacatatac 135289
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 39082 atacacatacatgtacacatatac 39105 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 38504 atacacatacatgtacacatatac 38527
>gb|AC092647.2| Homo sapiens BAC clone RP11-419M24 from 7, complete sequence Length = 163891 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tgtacaaataaagttaaata 137 |||||||||||||||||||| Sbjct: 65521 tgtacaaataaagttaaata 65540
>gb|AC136913.7| Mus musculus chromosome 15, clone RP23-315N11, complete sequence Length = 127286 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atacatgtacacatatacca 73 |||||||||||||||||||| Sbjct: 92762 atacatgtacacatatacca 92743
>gb|AC157380.6| Mus musculus chromosome 3, clone RP23-404C21, complete sequence Length = 196528 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ccagcatcaacaaatacatgtaca 123 |||||| ||||||||||||||||| Sbjct: 109190 ccagcaccaacaaatacatgtaca 109167
>emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in linkage group 10, complete sequence Length = 83568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tacatgtacaaataaagtta 133 |||||||||||||||||||| Sbjct: 20999 tacatgtacaaataaagtta 20980
>emb|BX088723.4| Human DNA sequence from clone RP11-52E20 on chromosome X, complete sequence Length = 146782 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 |||||||||||| ||||||||||| Sbjct: 92855 atacaaatacatatacacatatac 92878
>emb|AL592447.3| Human DNA sequence from clone RP11-405P11 on chromosome 1 Contains a DEAD (Asp-Glu-Ala-As) box polypeptide 19 (DDX19) pseudogene, complete sequence Length = 142864 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 acaaataaagttaaatatgtaact 144 |||||||||| ||||||||||||| Sbjct: 2274 acaaataaaggtaaatatgtaact 2251
>emb|AL158074.18| Human DNA sequence from clone RP11-330J23 on chromosome 9p21.1-22.3, complete sequence Length = 133690 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 atataccacaatcattgtgg 85 |||||||||||||||||||| Sbjct: 4380 atataccacaatcattgtgg 4361
>emb|AL139278.12| Human DNA sequence from clone RP4-639D23 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 95866 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 caaatacatgtacacatata 70 |||||||||||||||||||| Sbjct: 16599 caaatacatgtacacatata 16618
>gb|AC158128.3| Mus musculus chromosome 15, clone RP24-310D6, complete sequence Length = 158257 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||||||| |||||||||||||| Sbjct: 54496 atacaaatatatgtacacatatac 54519
>ref|XM_963636.1| PREDICTED: Tribolium castaneum similar to CG9918-PD (LOC657164), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 tgctgacgttgccgacgacg 351 |||||||||||||||||||| Sbjct: 205 tgctgacgttgccgacgacg 186
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 ggaagctgctgacgttgccgacga 349 |||||||||||| ||||||||||| Sbjct: 3128530 ggaagctgctgaggttgccgacga 3128507
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 acgaacggcgccatgaacgc 431 |||||||||||||||||||| Sbjct: 49716 acgaacggcgccatgaacgc 49735
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 acgaacggcgccatgaacgc 431 |||||||||||||||||||| Sbjct: 147803 acgaacggcgccatgaacgc 147822
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgacgttgccgacgacgacg 354 |||||||||||||||||||| Sbjct: 49817 tgacgttgccgacgacgacg 49798
>emb|AJ584640.1| Bufo melanostictus partial mitochondrial genome Length = 16328 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 4233 acccttgaagtacttctggc 4214
>emb|CR387923.11| Zebrafish DNA sequence from clone CH211-284A17 in linkage group 18, complete sequence Length = 25205 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 caaataaagttaaatatgta 141 |||||||||||||||||||| Sbjct: 9657 caaataaagttaaatatgta 9638
>emb|AL732516.6| Mouse DNA sequence from clone RP23-403H17 on chromosome 11 Contains a novel gene, complete sequence Length = 99659 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||||||| |||||||||||||| Sbjct: 74356 atacaaatatatgtacacatatac 74333
>gb|AC161592.2| Mus musculus BAC clone RP24-252H17 from chromosome 13, complete sequence Length = 186026 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatataccaca 75 ||||||||||||| ||| |||||||||| Sbjct: 54469 atacaaatacatgcacaaatataccaca 54496
>gb|AC183383.2| Pan troglodytes BAC clone CH251-394M21 from chromosome 7, complete sequence Length = 146307 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgtacaaataaagttaaata 137 |||||||||||||||||||| Sbjct: 130204 tgtacaaataaagttaaata 130185
>gb|AC092819.2| Homo sapiens chromosome 8, clone RP11-716D16, complete sequence Length = 153310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 taaagttaaatatgtaactt 145 |||||||||||||||||||| Sbjct: 36828 taaagttaaatatgtaactt 36809
>gb|AC113613.4| Homo sapiens BAC clone RP11-511I21 from 4, complete sequence Length = 86568 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 caaatacatgtacacatata 70 |||||||||||||||||||| Sbjct: 31696 caaatacatgtacacatata 31715
>gb|AC021558.10| Homo sapiens chromosome 8, clone RP11-746L20, complete sequence Length = 171582 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 41491 acaaatacatgtacacatat 41472
>gb|AC020782.12| Homo sapiens chromosome 8, clone RP11-562L3, complete sequence Length = 104745 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 taaagttaaatatgtaactt 145 |||||||||||||||||||| Sbjct: 18401 taaagttaaatatgtaactt 18420
>gb|AC099545.2| Homo sapiens chromosome 3 clone RP11-601G18, complete sequence Length = 158485 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 gtcgtgtaatttaattatagattt 40 |||||||||| ||||||||||||| Sbjct: 115908 gtcgtgtaatgtaattatagattt 115885
>gb|AC096506.5| Homo sapiens Xp BAC RP11-64I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120135 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 caaatacatgtacacatata 70 |||||||||||||||||||| Sbjct: 60113 caaatacatgtacacatata 60132
>gb|AC002524.1| Homo sapiens x BAC GS1-257G1 (Genome Systems Human BAC Library) complete sequence Length = 202540 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ccaggtccctgtagttgaag 387 |||||||||||||||||||| Sbjct: 33281 ccaggtccctgtagttgaag 33300
>gb|DQ377355.1| Norops auratus voucher LACM148890 NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1431 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 364 acccttgaagtacttctggc 345
>gb|DQ377354.1| Norops auratus voucher LACM148982 NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1432 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 364 acccttgaagtacttctggc 345
>gb|DQ377353.1| Norops auratus voucher LACM148978 NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1432 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 364 acccttgaagtacttctggc 345
>gb|DQ377352.1| Norops auratus voucher LACM148976 NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1431 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 364 acccttgaagtacttctggc 345
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 atctgggccttggccatcgc 272 |||||||||||||||||||| Sbjct: 2508715 atctgggccttggccatcgc 2508734
>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216030 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacat 67 |||||||||||||||||||| Sbjct: 33578 atacaaatacatgtacacat 33597
>gb|AC009032.8| Homo sapiens chromosome 16 clone RP11-140H17, complete sequence Length = 184511 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 28454 acaaatacatgtacacatat 28473
>gb|AC154339.2| Mus musculus BAC clone RP23-248O15 from chromosome 13, complete sequence Length = 174982 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 108827 atacacatacatgtacacatatac 108804
>gb|AC154255.2| Mus musculus BAC clone RP24-202K20 from chromosome 13, complete sequence Length = 159755 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 36875 atacatatacatgtacacatatac 36852
>gb|AC020732.4|AC020732 Homo sapiens BAC clone RP11-556H16 from X, complete sequence Length = 181559 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 caaatacatgtacacatata 70 |||||||||||||||||||| Sbjct: 58113 caaatacatgtacacatata 58132
>gb|AC124029.15| Mus musculus chromosome 1, clone RP23-238E7, complete sequence Length = 204904 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atacatgtacacatatacca 73 |||||||||||||||||||| Sbjct: 204458 atacatgtacacatatacca 204439
>gb|AC007691.4|AC007691 Drosophila melanogaster, chromosome 3R, region 82B-82C, BAC clone BACR07E06, complete sequence Length = 171629 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaatacatgtacacatatac 71 |||||||||||||||||||| Sbjct: 107698 aaatacatgtacacatatac 107717
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgtaatttaattatagattt 40 |||||||||||||||||||| Sbjct: 884300 tgtaatttaattatagattt 884281
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cgtcggggtcgatctgggcc 261 |||||||||||||||||||| Sbjct: 18335702 cgtcggggtcgatctgggcc 18335683
>gb|AC148038.3| Ovis aries clone CH243-361I2, complete sequence Length = 198973 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 495 catgtactggatgttgtacagcac 518 |||||| ||||||||||||||||| Sbjct: 29013 catgtaatggatgttgtacagcac 28990
>gb|AC012321.8| Homo sapiens chromosome 16 clone RP11-311C24, complete sequence Length = 131694 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 100131 acaaatacatgtacacatat 100150
>gb|AC078878.20| Homo sapiens 12 BAC RP11-983C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172393 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 85881 atacatatacatgtacacatatac 85858
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cgtcggggtcgatctgggcc 261 |||||||||||||||||||| Sbjct: 136915 cgtcggggtcgatctgggcc 136896
>dbj|AK106770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F08, full insert sequence Length = 2771 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 acgaacggcgccatgaacgc 431 |||||||||||||||||||| Sbjct: 2376 acgaacggcgccatgaacgc 2357
>gb|AC112957.14| Mus musculus chromosome 15, clone RP23-418C6, complete sequence Length = 186051 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 ||||||||| |||||||||||||| Sbjct: 160001 atacaaatatatgtacacatatac 159978
>emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chromosome 13, complete sequence Length = 230723 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 70664 atacatatacatgtacacatatac 70687
>gb|AC152922.5| Mus musculus BAC clone RP24-386D3 from 10, complete sequence Length = 191855 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 |||||| ||||||||||||||||| Sbjct: 67948 atacaattacatgtacacatatac 67925
>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence Length = 196090 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 acatgtacacatataccaca 75 |||||||||||||||||||| Sbjct: 53922 acatgtacacatataccaca 53941
>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 200540 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 caaatacatgtacaaataaa 129 |||||||||||||||||||| Sbjct: 142372 caaatacatgtacaaataaa 142353
>emb|AL162872.4|CNS01RI5 Human chromosome 14 DNA sequence BAC R-764E10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173106 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 attatagatttgttcaagat 49 |||||||||||||||||||| Sbjct: 65222 attatagatttgttcaagat 65241
>gb|AF004525.1|AF004525 Bufo viridis CAS182601 NADH dehydrogenase subunit I (ND1) gene, partial cds, tRNAIle, tRNAGln and tRNAMet genes, complete sequence, and NADH dehydrogenase subunit II (ND2) gene, partial cds, mitochondrial genes for mitochondrial products Length = 1063 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 acccttgaagtacttctggc 307 |||||||||||||||||||| Sbjct: 917 acccttgaagtacttctggc 898
>gb|AE003605.3| Drosophila melanogaster chromosome 3R, section 3 of 118 of the complete sequence Length = 273418 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaatacatgtacacatatac 71 |||||||||||||||||||| Sbjct: 35884 aaatacatgtacacatatac 35903
>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence Length = 154308 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 caaatacatgtacacatata 70 |||||||||||||||||||| Sbjct: 121687 caaatacatgtacacatata 121706
>emb|CR626961.6| Zebrafish DNA sequence from clone CH211-160F13 in linkage group 10, complete sequence Length = 167229 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 tacatgtacaaataaagtta 133 |||||||||||||||||||| Sbjct: 163716 tacatgtacaaataaagtta 163697
>emb|AL929510.17| Mouse DNA sequence from clone RP23-241O13 on chromosome 2, complete sequence Length = 160386 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 acatgtacacatataccaca 75 |||||||||||||||||||| Sbjct: 152682 acatgtacacatataccaca 152701
>gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, complete sequence Length = 212662 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atacatgtacacatatacca 73 |||||||||||||||||||| Sbjct: 43872 atacatgtacacatatacca 43853
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgtaatttaattatagattt 40 |||||||||||||||||||| Sbjct: 884300 tgtaatttaattatagattt 884281
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tgtaatttaattatagattt 40 |||||||||||||||||||| Sbjct: 21885 tgtaatttaattatagattt 21866
>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence Length = 148392 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 atacaaatacatgtacacatatac 71 |||||||||||| ||||||||||| Sbjct: 11335 atacaaatacatatacacatatac 11312
>emb|CT033787.9| Mouse DNA sequence from clone RP24-86C3 on chromosome 12, complete sequence Length = 194345 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 116361 atacatatacatgtacacatatac 116384
>gb|AC140369.2| Mus musculus BAC clone RP23-200L3 from 3, complete sequence Length = 191613 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 acaaatacatgtacacatat 69 |||||||||||||||||||| Sbjct: 37156 acaaatacatgtacacatat 37175
>emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chromosome 3, complete sequence Length = 249405 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 atacaaatacatgtacacatatac 71 ||||| |||||||||||||||||| Sbjct: 245069 atacacatacatgtacacatatac 245092
>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence Length = 214760 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tacaaatacatgtacacata 68 |||||||||||||||||||| Sbjct: 110183 tacaaatacatgtacacata 110202 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,729,995 Number of Sequences: 3902068 Number of extensions: 4729995 Number of successful extensions: 113229 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112114 Number of HSP's gapped (non-prelim): 1098 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
