ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart16h01 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 101 bits (252), Expect = 4e-22 Identities = 41/68 (60%), Positives = 53/68 (77%) Frame = -2 Query: 391 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYE 212 W+ WDKWTAAYP+ + Y+GL A ++ +VHPKN+YYGV V QK NYGG+M+W+RY Sbjct: 231 WEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYF 290 Query: 211 DKRTNYSS 188 DK+TNYSS Sbjct: 291 DKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 78.6 bits (192), Expect = 3e-15 Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = -2 Query: 382 QWDKWTAAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQVVQKAANYGGVMVWERYED 209 QW+KWTA YP + +YLGL A+ K V K LYY ++ VQKA NYGG+M+W+R+ D Sbjct: 232 QWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYD 291 Query: 208 KRTNYSSYAIQWA 170 K+T Y WA Sbjct: 292 KQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 72.8 bits (177), Expect = 2e-13 Identities = 30/72 (41%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Frame = -2 Query: 403 CAANWQRQWDKWTAAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANYGGVMV 227 C + + W+KW AA+P +++Y+GL AS EQ ++ K+LYY ++Q V+ NYGG+ + Sbjct: 216 CTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAI 275 Query: 226 WERYEDKRTNYS 191 ++RY DK+ NY+ Sbjct: 276 YDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 59.7 bits (143), Expect = 2e-09 Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Frame = -2 Query: 379 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 206 W++WT + + +I+LGLPA+ + G YV P L ++ ++K+ YGGVM+W ++ D Sbjct: 228 WNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDD 287 Query: 205 RTNYSS 188 + YSS Sbjct: 288 KNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 58.2 bits (139), Expect = 5e-09 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Frame = -2 Query: 379 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 206 W+KWT + + + +LGLPA+ + G Y+ P L ++ ++K+ YGGVM+W ++ D Sbjct: 231 WNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDD 290 Query: 205 RTNYSS 188 + YSS Sbjct: 291 KNGYSS 296
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 2/71 (2%) Frame = -2 Query: 394 NWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 221 N++R+W++WT+ P+ ++Y+GLPA++ G Y+ + L V+ ++ ++ YGGVM+W Sbjct: 219 NFKRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPFLKGSSKYGGVMLWN 277 Query: 220 RYEDKRTNYSS 188 R D + YSS Sbjct: 278 RKFDVQCGYSS 288
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 55.8 bits (133), Expect = 2e-08 Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Frame = -2 Query: 394 NWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 221 N W++WT++ S ++GLPAS G ++ L ++ V++++ YGGVM+W Sbjct: 225 NLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWS 284 Query: 220 RYEDKRTNYSS 188 +Y D ++ YSS Sbjct: 285 KYYDDQSGYSS 295
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%) Frame = -2 Query: 409 ADCAANWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYG 239 AD A N W++WTA +P++++Y+GLPA+ + G++ L V+ ++ ++NYG Sbjct: 212 ADNADNLLSSWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYG 270 Query: 238 GVMVWERYED 209 GVM+W + D Sbjct: 271 GVMLWSKAFD 280
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 50.8 bits (120), Expect = 7e-07 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = -2 Query: 394 NWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYGGVMVW 224 N W++WT++ + Q++LG+PAS+ G + L V+ ++ + YGGVM+W Sbjct: 217 NLVNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIW 275 Query: 223 ERYEDKRTNYSS 188 +R+ D ++ YS+ Sbjct: 276 DRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 50.1 bits (118), Expect = 1e-06 Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = -2 Query: 379 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 206 W++WT++ + Q++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D Sbjct: 228 WNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDG 286 Query: 205 RTNYSSYAI 179 ++ YS I Sbjct: 287 QSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 46.2 bits (108), Expect = 2e-05 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = -2 Query: 400 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 227 A N W++WT + QI+LGLPAS G ++ L V+ ++ +A YGGVM+ Sbjct: 218 ADNLLSSWNQWTTVQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVML 276 Query: 226 WERYEDKRTNYSS 188 W + D + YSS Sbjct: 277 WSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 44.3 bits (103), Expect = 7e-05 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -2 Query: 400 AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMV 227 A N + W++W A + +I+LGLPA++ G ++ L V+ ++ + YGGVM+ Sbjct: 216 ADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVML 274 Query: 226 WERYEDKRTNYSS 188 W ++ D YSS Sbjct: 275 WSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Frame = -2 Query: 379 WDKWT-AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWER 218 W WT + YP ++L LPAS+ GY+ P L V+ + Y G+ +W R Sbjct: 233 WLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNR 292 Query: 217 YEDKRTNYSSYAIQW 173 DK T YS+ I++ Sbjct: 293 QADKETGYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Frame = -2 Query: 403 CAANWQRQWDKW------TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAA 248 C+ + Q WD W + + +++LGLP S G Y+ +L I + ++ Sbjct: 218 CSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSS 277 Query: 247 NYGGVMVWE 221 ++GG+ +W+ Sbjct: 278 SFGGIALWD 286
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = -2 Query: 403 CAANWQRQWDKWT--AAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQKAANYGG 236 C+ N Q W+ W+ A S ++YLGLP S G+V + V+ ++ +++GG Sbjct: 208 CSLNQQFNWNSWSNYARGKSIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKGDSSFGG 266 Query: 235 VMVWE 221 + +W+ Sbjct: 267 ISIWD 271
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 35.0 bits (79), Expect = 0.042 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%) Frame = -2 Query: 403 CAANWQRQWDKWTAAYPSA-----QIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAANYG 239 C+ N Q +D W+ SA ++++G+PA+ GYV L I+ ++ +++ Sbjct: 215 CSINGQFNYDTWSKFADSAPNKNIKLFVGVPATSNIAGYVDTSKL-SSAIEEIKCDSHFA 273 Query: 238 GVMVWE 221 GV +W+ Sbjct: 274 GVSLWD 279
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.3 bits (72), Expect = 0.27 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 379 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 221 WD W T+ + +I +P S G YV L V + K ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 30.8 bits (68), Expect = 0.80 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 379 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 221 WD W T+ + +I +P S G YV L V + + ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 30.4 bits (67), Expect = 1.0 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = -2 Query: 355 PSAQIYLGLPASEQ---KVGYVHPKNLYYGVIQVVQK-AANYGGVMVWE 221 P A++++GLPAS+ K Y+ P V + K + +GG+MVWE Sbjct: 267 PLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVWE 315
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 325 ASEQKVGYVHPKNLYYGVIQVVQKA 251 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.0 bits (66), Expect = 1.4 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = -1 Query: 392 LAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGGAEGGQLWRGHGLG 222 L +A + GG + G + R A R+ RSS P RR GGA GG RG G Sbjct: 997 LCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGGAHGG---RGRGRA 1052 Query: 221 TLRGQADKLQQL 186 L+ A ++ L Sbjct: 1053 RLKSTASSIETL 1064
>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = -1 Query: 407 RLRRQLAEAVGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGH 231 +L+ + VGQVDG VSV A +P++ + + G L + P++ GG GG+ Sbjct: 798 KLQDTIIVLVGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQ 853 Query: 230 GLGT 219 G GT Sbjct: 854 GGGT 857
>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = -1 Query: 407 RLRRQLAEAVGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGH 231 +L+ + VGQVDG VSV A +P++ + + G L + P++ GG GG+ Sbjct: 798 KLQDTIIVLVGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQ 853 Query: 230 GLGT 219 G GT Sbjct: 854 GGGT 857
>YFBH_SALTY (O52326) Hypothetical protein yfbH| Length = 299 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = -1 Query: 410 RRLRRQLAEAVGQVDGGVSVGADLPRAAGVRAEGRLRSSKEPLLRRHTGGAEGGQLWR 237 R+L +A + ++ + AAG RA+GR+ +KE R+ G L+R Sbjct: 123 RQLEEDIARGITALEAIIGKPVTCSAAAGWRADGRVVRAKESFNLRYNSDCRGTTLFR 180
>FLGE_CAUCR (P35806) Flagellar hook protein flgE| Length = 591 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 310 PSALTPAARGRSAPTDTPPSTCPTASASW 396 P+A+T + G APT TPP+ P +W Sbjct: 404 PTAITIKSSGYIAPTVTPPAVQPPTPPTW 432
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 391 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 284 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 295 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 173 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 297 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 193 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 Query: 364 AAYPSAQIYLGLPASEQKVGYV 299 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2| (RalGDS-like factor) (RAS-associated protein RAB2L) Length = 778 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 292 LDERNRPSALTPAARGRSAPTDTPPS 369 L +R RPSA TP + + + TPPS Sbjct: 731 LRQRRRPSAATPGSHSGPSASGTPPS 756
>RPOC_RHOPA (Q6N4S0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1402 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +1 Query: 292 LDERNRPSALTPAARGRSAPTDTPPS 369 LDER + +A+ PAA + P PP+ Sbjct: 1376 LDEREKQAAIVPAAAPEAEPLSLPPA 1401
>CILA_KLEPN (P45413) Citrate lyase alpha chain (EC 4.1.3.6) (Citrase alpha| chain) (Citrate (pro-3S)-lyase alpha chain) (Citrate CoA-transferase subunit) (EC 2.8.3.10) Length = 508 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -1 Query: 356 SVGADLPRAAGVRAEGRLRSSKEPLLRRHTGGAEGGQLWRGHGLGTLRGQADKLQQLR 183 + GADL GR+ E +L R T GA L HG+ + D + LR Sbjct: 397 AAGADLTIITAPLVRGRIPCVVEKVLTRVTPGASVDVLVTDHGIAVNPARQDLIDNLR 454
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 291 RTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATPSNG 172 RT TTAS P W+G T TS ++T T +NG Sbjct: 313 RTPTTASTITTTTEP-----WTGTFTSTSTEMTTVTGTNG 347
>NFASC_CHICK (O42414) Neurofascin precursor| Length = 1369 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -3 Query: 297 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQITAATP---SNGLDPPSLRSSP 142 +QRT + YR+ R T G V + + ATP S L PP+ +P Sbjct: 1015 VQRTDPISRYRFFLRARTQVGDGEVIVEESPALLNEATPTPASTWLPPPTTELTP 1069
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -2 Query: 298 HPKNLYYGVIQVVQKAANYGGVMVWERYEDKRTN 197 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>SP1_HORSE (P81121) Seminal plasma protein HSP-1| Length = 120 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -3 Query: 288 TSTTASYRWCRRRPTMAGSW 229 T T + YRWC T +GSW Sbjct: 49 TRTDSFYRWCSLTGTYSGSW 68
>CR014_HUMAN (Q68D86) Protein C18orf14| Length = 513 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 409 ADCAANWQRQWDKWTAAYPSAQ 344 +DC ANW+ +W K A SA+ Sbjct: 96 SDCTANWREKWSKVRAERNSAR 117
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 27.3 bits (59), Expect = 8.8 Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 8/75 (10%) Frame = -1 Query: 371 VDGGVSVGADLPRAAGVRAEGRLRSSKEPLLRRHTGGAE---GGQLWR-----GHGLGTL 216 V GVS G R AG G P ++ GGA GG + G G G Sbjct: 389 VPDGVSTGPSGHRNAGPSGPGT--GQARPYAKKGPGGARPGTGGPVGARSGGPGRGAGGG 446 Query: 215 RGQADKLQQLRHPMG 171 +GQ+ Q +HP G Sbjct: 447 QGQSQGQGQRKHPYG 461
>PPID_MOUSE (Q9CR16) 40 kDa peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-40) (CYP-40) Length = 369 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/57 (28%), Positives = 31/57 (54%) Frame = +1 Query: 40 YKAHNFTLAILIHCKVSKHMHMHMQYTDGYNKSTR*RSERRRVKPIGWRSCCNLSAC 210 +K+ N+ +AI + KV ++Y D +K+ +++R R++PI N+ AC Sbjct: 233 FKSQNWEMAIKKYAKV-------LRYVDS-SKAVIEKADRSRLQPIALSCVLNIGAC 281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,964,074 Number of Sequences: 219361 Number of extensions: 1020527 Number of successful extensions: 4237 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3935 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4223 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
