ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart16g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds 295 6e-77
2gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog m... 281 1e-72
3gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, com... 206 5e-50
4gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds 137 4e-29
5gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, com... 92 2e-15
6gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds 92 2e-15
7gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete... 64 4e-07
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 4e-07
9gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare str... 64 4e-07
10gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 64 4e-07
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
12gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 64 4e-07
13dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
14emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansi... 48 0.025
15emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansi... 46 0.10
16emb|AJ295940.1|FPR295940 Festuca pratensis mRNA for beta expansi... 46 0.10
17gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence 44 0.40
18gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, co... 44 0.40
19gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, compl... 42 1.6
20gb|AC022439.5| Homo sapiens chromosome 5 clone RP11-184A13, comp... 42 1.6
21gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, co... 42 1.6
22gb|AF097145.1|AF097145 Omaspides bistriata 12S small subunit rib... 42 1.6
23gb|AY111405.1| Zea mays CL5426_1 mRNA sequence 42 1.6
24gb|AY104151.1| Zea mays PCO112411 mRNA sequence 42 1.6
25gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosom... 40 6.2
26gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, com... 40 6.2
27emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 i... 40 6.2
28emb|AL033392.5|HS403M6 Human DNA sequence from clone RP3-403M6 o... 40 6.2
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.2
30emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on ch... 40 6.2
31emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA 40 6.2
32emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for t... 40 6.2
33emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete s... 40 6.2
34gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell... 40 6.2
35gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome ... 40 6.2
36emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 i... 40 6.2
37gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, com... 40 6.2
38gb|AC157756.1| Mus musculus 10 BAC RP24-377M12 (Roswell Park Can... 40 6.2
39gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 ... 40 6.2
40emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 i... 40 6.2
41gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, co... 40 6.2
42emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 ... 40 6.2 
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds
          Length = 1132

 Score =  295 bits (149), Expect = 6e-77
 Identities = 230/257 (89%)
 Strand = Plus / Minus

                                                                       
Query: 202 tagtacctagcaataacttaaaatccttcgatcctcgtaaatagggaacctccagatgac 261
           |||| ||| |||||||||||||| | || |||||||  ||||||||| | | | ||||||
Sbjct: 945 tagtgcctggcaataacttaaaaccattagatcctcacaaatagggatcatgctgatgac 886

                                                                       
Query: 262 accaaaatgattaactcggcatcgatcggagaagtgctcaggtaagccaatcaatagaac 321
           ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 885 accaaaatgattaactcggcatcgatcggagaagtacgcacgtaagccaatcaatagaac 826

                                                                       
Query: 322 tggatgttagaccagtaggctttggcctgctgccaatatgccgggatggcattgttggcc 381
           |||| ||| ||||||||||| | | || |||||||||| |||||||||||||||||||||
Sbjct: 825 tggaggttggaccagtaggcatggtccggctgccaataagccgggatggcattgttggcc 766

                                                                       
Query: 382 accagcatctttccggtgtcggtggtgatgcgtatggagaatggcccctgcagcgggcgg 441
           |||||| |||||||||| ||| |||||||||| |||| ||||||||||||||||||||||
Sbjct: 765 accagcgtctttccggtatcgctggtgatgcggatggcgaatggcccctgcagcgggcgg 706

                            
Query: 442 ttggtgtccatgcgcca 458
           ||||||||||| |||||
Sbjct: 705 ttggtgtccatccgcca 689



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 70/77 (90%), Gaps = 6/77 (7%)
 Strand = Plus / Minus

                                                                        
Query: 55   atcaggtatggaactg--atagtggccggggtagcacatggacggatgctactccacttg 112
            |||||| |||||||||  ||||||||||||||||||||||||    ||||||||||||||
Sbjct: 1132 atcaggcatggaactgcgatagtggccggggtagcacatgga----tgctactccacttg 1077

                             
Query: 113  cctagctccttacattt 129
            |||||||||||||||||
Sbjct: 1076 cctagctccttacattt 1060
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>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds
          Length = 1232

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Minus

                                                                       
Query: 213 aataacttaaaatccttcgatcctcgtaaatagggaacctccagatgacaccaaaatgat 272
           |||||||||||||| ||||||| ||||||||||||| | ||| |||||||||||||||||
Sbjct: 964 aataacttaaaatcattcgatcatcgtaaatagggatcatcctgatgacaccaaaatgat 905

                                                                       
Query: 273 taactcggcatcgatcggagaagtgctcaggtaagccaatcaatagaactggatgttaga 332
           |||| | ||||||||||||||||| | || |||||| ||||| |||||||||| ||| ||
Sbjct: 904 taacccagcatcgatcggagaagtacgcacgtaagcaaatcagtagaactggaggttgga 845

                                                                       
Query: 333 ccagtaggctttggcctgctgccaatatgccgggatggcattgttggccaccagcatctt 392
           ||| ||||| | | ||||||||||||| |||||||||||||||||||| |||||| ||||
Sbjct: 844 ccaataggcatggtcctgctgccaataagccgggatggcattgttggcgaccagcgtctt 785

                                                                       
Query: 393 tccggtgtcggtggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtccat 452
           |||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 784 tccggtatcgctggtgatgcggatggagaatggcccctgcaccgggcggttggtgtccat 725

                 
Query: 453 gcgcca 458
            |||||
Sbjct: 724 ccgcca 719



 Score =  119 bits (60), Expect = 8e-24
 Identities = 106/120 (88%), Gaps = 6/120 (5%)
 Strand = Plus / Minus

                                                                        
Query: 12   catccatttgaattaatttataatttcgatttgatcacactctatcaggtatggaactg- 70
            |||||||||||||||||||||||  |  ||| ||||||||| ||||||| ||||||||| 
Sbjct: 1193 catccatttgaattaatttataagcttaattggatcacactttatcaggcatggaactgc 1134

                                                                        
Query: 71   -atagtggccggggtagcacatggacggatgctactccacttgcctagctccttacattt 129
             ||||||||||||||||||||||||    || ||||||||||||||||||||||||||||
Sbjct: 1133 gatagtggccggggtagcacatgga----tgatactccacttgcctagctccttacattt 1078
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>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds
          Length = 939

 Score =  206 bits (104), Expect = 5e-50
 Identities = 143/156 (91%)
 Strand = Plus / Minus

                                                                       
Query: 303 gtaagccaatcaatagaactggatgttagaccagtaggctttggcctgctgccaatatgc 362
           ||||||||||||||||||||||| ||| ||||||||||| | | || |||||||||| ||
Sbjct: 869 gtaagccaatcaatagaactggaggttggaccagtaggcatggtccggctgccaataagc 810

                                                                       
Query: 363 cgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggagaa 422
           ||||||||||||||||||||||||| |||||||||| ||| |||||||||| |||| |||
Sbjct: 809 cgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgcggatggcgaa 750

                                               
Query: 423 tggcccctgcagcgggcggttggtgtccatgcgcca 458
           |||||||||||||||||||||||||||||| |||||
Sbjct: 749 tggcccctgcagcgggcggttggtgtccatccgcca 714



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 165 tcaggacacacaatcgacga 184
           ||||||||||||||||||||
Sbjct: 928 tcaggacacacaatcgacga 909
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>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds
          Length = 1078

 Score =  137 bits (69), Expect = 4e-29
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                       
Query: 310 aatcaatagaactggatgttagaccagtaggctttggcctgctgccaatatgccgggatg 369
           |||||||||||||||| ||| |||||||| || ||| || || |||| || |||||||||
Sbjct: 845 aatcaatagaactggacgttggaccagtaagcattgtccggccgccagtacgccgggatg 786

                                                                       
Query: 370 gcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggagaatggcccc 429
            ||||||||||||| ||| |||| |||| |||| ||||||| || |||||||| ||||||
Sbjct: 785 acattgttggccacaagcgtcttcccggagtcgctggtgatacgcatggagaagggcccc 726

                                        
Query: 430 tgcagcgggcggttggtgtccatgcgcca 458
           |||||||||||| |||||||||| |||||
Sbjct: 725 tgcagcgggcggctggtgtccatccgcca 697
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>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
          Length = 1013

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| ||||||||||||||||| |||| |||| |||| |||||||||| ||||||
Sbjct: 810 gccgggatgacattgttggccaccagcttcttgccggagtcgctggtgatgcgcatggag 751

                                                 
Query: 421 aatggcccctgcagcgggcggttggtgtccatgcgcca 458
           || |||||||| ||  || |||||| |||||| |||||
Sbjct: 750 aagggcccctggaggcggtggttggagtccatccgcca 713
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>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
          Length = 1056

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| ||||||||||||||||| |||| |||| |||| |||||||||| ||||||
Sbjct: 842 gccgggatgacattgttggccaccagcttcttgccggagtcgctggtgatgcgcatggag 783

                                                 
Query: 421 aatggcccctgcagcgggcggttggtgtccatgcgcca 458
           || |||||||| ||  || |||||| |||||| |||||
Sbjct: 782 aagggcccctggaggcggtggttggagtccatccgcca 745
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>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds
          Length = 1210

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 404 tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
           |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 942 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 895
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 404    tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
              |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 169338 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 169291
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>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0080O10, from chromosome 3, complete sequence
          Length = 127917

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 404  tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
            |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 6405 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 6358
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 404    tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
              |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 103338 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 103291
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 404    tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
              |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 169338 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 169291
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 404   tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
             |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 93328 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 93375
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>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full
           insert sequence
          Length = 1027

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 404 tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtcca 451
           |||||||||| | |||||| ||||||||||||||| ||||||||||||
Sbjct: 750 tggtgatgcggagggagaagggcccctgcagcgggtggttggtgtcca 703
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>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene)
          Length = 1194

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                       
Query: 373 ttgttggccaccagcatctttccggtgtcggtggtgatgcgtatggagaatggcccctgc 432
           |||||||| || |||  ||| |||| |||| |||||||||| |||||||||||| |||| 
Sbjct: 831 ttgttggcgacgagctgcttgccggagtcgctggtgatgcgcatggagaatggcgcctgg 772

                               
Query: 433 agcgggcggttggtgtccat 452
           ||  || |||||| ||||||
Sbjct: 771 agacggtggttggagtccat 752
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>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene)
          Length = 1219

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 404 tggtgatgcgtatggagaatggcccctgcagcgggcggttggtgtccatgcgcca 458
           |||||||||| |||||||| ||| |||| ||  || |||||| ||||||||||||
Sbjct: 814 tggtgatgcgcatggagaagggcgcctggaggcggtggttggagtccatgcgcca 760
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>emb|AJ295940.1|FPR295940 Festuca pratensis mRNA for beta expansin B1 (expB1 gene)
          Length = 1224

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 301 aggtaagccaatcaatagaactg 323
           |||||||||||||||||||||||
Sbjct: 868 aggtaagccaatcaatagaactg 846
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>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence
          Length = 832

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| | |||||||| || ||| |||| ||||  ||| ||  |||||| ||||||
Sbjct: 256 gccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggag 197

                                                 
Query: 421 aatggcccctgcagcgggcggttggtgtccatgcgcca 458
           || |||  |||||   || |||||||||||||||||||
Sbjct: 196 aagggcggctgcatgcggtggttggtgtccatgcgcca 159
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>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds
          Length = 1479

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| | |||||||| || ||| |||| ||||  ||| ||  |||||| ||||||
Sbjct: 892 gccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcggatggag 833

                                                 
Query: 421 aatggcccctgcagcgggcggttggtgtccatgcgcca 458
           || |||  |||||   || |||||||||||||||||||
Sbjct: 832 aagggcggctgcatgcggtggttggtgtccatgcgcca 795
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>gb|AC113355.2| Homo sapiens chromosome 5 clone CTD-3007L5, complete sequence
          Length = 130307

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 16     catttgaattaatttataatt 36
              |||||||||||||||||||||
Sbjct: 119462 catttgaattaatttataatt 119482
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>gb|AC022439.5| Homo sapiens chromosome 5 clone RP11-184A13, complete sequence
          Length = 134576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     catttgaattaatttataatt 36
              |||||||||||||||||||||
Sbjct: 119571 catttgaattaatttataatt 119551
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>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| | || ||||||||||||  | | ||||  ||| |||||||||| ||||||
Sbjct: 868 gccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgcatggag 809

                                    
Query: 421 aatggcccctgcagcgggcggttgg 445
           || || ||  | |||||||||||||
Sbjct: 808 aaggggccacggagcgggcggttgg 784
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>gb|AF097145.1|AF097145 Omaspides bistriata 12S small subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 483

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 17  atttgaattaatttataattt 37
           |||||||||||||||||||||
Sbjct: 351 atttgaattaatttataattt 331
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>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence
          Length = 528

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcg 413
           ||||||||| | | ||||||||||||| |||| ||||  ||| ||||||||||
Sbjct: 306 gccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 358
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>gb|AY104151.1| Zea mays PCO112411 mRNA sequence
          Length = 1171

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                       
Query: 361 gccgggatggcattgttggccaccagcatctttccggtgtcggtggtgatgcgtatggag 420
           ||||||||| | || ||||||||||||  | | ||||  ||| |||||||||| ||||||
Sbjct: 877 gccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgcgcatggag 818

                                    
Query: 421 aatggcccctgcagcgggcggttgg 445
           || || ||  | |||||||||||||
Sbjct: 817 aaggggccacggagcgggcggttgg 793
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>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete
             sequence
          Length = 184128

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aaagtagtacctagcaataa 217
             ||||||||||||||||||||
Sbjct: 18075 aaagtagtacctagcaataa 18056
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>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence
          Length = 218079

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aaagtagtacctagcaataa 217
              ||||||||||||||||||||
Sbjct: 117254 aaagtagtacctagcaataa 117235
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>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16,
             complete sequence
          Length = 91165

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    atccatttgaattaatttat 32
             ||||||||||||||||||||
Sbjct: 67726 atccatttgaattaatttat 67707
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>emb|AL033392.5|HS403M6 Human DNA sequence from clone RP3-403M6 on chromosome 6q24.1-25.3
             Contains part of the AKAP12 gene for A kinase (PRKA)
             anchor protein (gravin) 12, complete sequence
          Length = 86329

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cttcatccatttgaattaat 28
             ||||||||||||||||||||
Sbjct: 55823 cttcatccatttgaattaat 55842
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 428     cctgcagcgggcggttggtg 447
               ||||||||||||||||||||
Sbjct: 3548740 cctgcagcgggcggttggtg 3548759
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>emb|AL137244.28| Human DNA sequence from clone RP11-173B14 on chromosome 13 Contains 2
             novel genes, the UCHL3 gene for ubiquitin
             carboxyl-terminal esterase L3 (ubiquitin thiolesterase),
             the 5' end of the LMO7 gene for LIM domain only 7
             (KIAA0858) and 2 CpG islands, complete sequence
          Length = 183358

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 13    atccattt-gaattaatttataatttcgattt 43
             |||||||| ||||||||||||||||| |||||
Sbjct: 90495 atccatttagaattaatttataattttgattt 90526
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>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ttataatttcgatttgatca 48
             ||||||||||||||||||||
Sbjct: 41566 ttataatttcgatttgatca 41547
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>emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for tRNA-Ser(UGA),
            tRNA-Gly(GCC), tRNA-Met(CAU), ORF701, ORF702 and ORF703
          Length = 3381

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   ttataatttcgatttgatca 48
            ||||||||||||||||||||
Sbjct: 1788 ttataatttcgatttgatca 1769
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>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 141662 tttgaattaatttataattt 141643
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>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 139358 tttgaattaatttataattt 139377
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>gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome 15, complete sequence
          Length = 196863

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    gaccagtaggctttggcctg 350
              ||||||||||||||||||||
Sbjct: 181178 gaccagtaggctttggcctg 181159
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>emb|BX088524.16| Zebrafish DNA sequence from clone CH211-215A9 in linkage group 10,
             complete sequence
          Length = 228624

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     cataaacttcatccatttgaattaattt 30
             ||||||||||| ||||||| ||||||||
Sbjct: 98523 cataaacttcagccatttgcattaattt 98496
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>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds
          Length = 1034

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 418 gagaatggcccctgcagcgggcgg 441
           ||||| ||||||||||||||||||
Sbjct: 846 gagaagggcccctgcagcgggcgg 823
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>gb|AC157756.1| Mus musculus 10 BAC RP24-377M12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    agatgacaccaaaatgatta 274
              ||||||||||||||||||||
Sbjct: 125506 agatgacaccaaaatgatta 125525
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>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete
              sequence
          Length = 283075

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     tttgaattaatttataattt 37
              ||||||||||||||||||||
Sbjct: 119551 tttgaattaatttataattt 119570
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>emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 in linkage group 10,
              complete sequence
          Length = 137433

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 3      cataaacttcatccatttgaattaattt 30
              ||||||||||| ||||||| ||||||||
Sbjct: 126876 cataaacttcagccatttgcattaattt 126849
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>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence
          Length = 228289

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   gaccagtaggctttggcctg 350
             ||||||||||||||||||||
Sbjct: 31122 gaccagtaggctttggcctg 31103
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>emb|AL845438.21| Zebrafish DNA sequence from clone CH211-120G21 in linkage group 10,
             complete sequence
          Length = 175059

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 3     cataaacttcatccatttgaattaattt 30
             ||||||||||| ||||||| ||||||||
Sbjct: 75447 cataaacttcagccatttgcattaattt 75420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,406,627
Number of Sequences: 3902068
Number of extensions: 3406627
Number of successful extensions: 65612
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 65501
Number of HSP's gapped (non-prelim): 109
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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