>dbj|AB046365.1| Bombyx mori mRNA for laminin, partial cds
          Length = 3470

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 265 tgcgatgataaaacaggagcct 286
           ||||||||||||||||||||||
Sbjct: 518 tgcgatgataaaacaggagcct 539

>gb|AY023587.1| Oryza sativa microsatellite MRG5912 containing (TTA)X23, genomic
          sequence
          Length = 269

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 34 aatatgtaatattgtatcact 54
          |||||||||||||||||||||
Sbjct: 80 aatatgtaatattgtatcact 60

>ref|XM_883491.1| Leishmania major strain Friedlin hypothetical protein (L2969.06)
            partial mRNA
          Length = 9039

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 353  ggcggcggtggccaagtgaac 373
            |||||||||||||||||||||
Sbjct: 2566 ggcggcggtggccaagtgaac 2586

>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 353    ggcggcggtggccaagtgaac 373
              |||||||||||||||||||||
Sbjct: 197546 ggcggcggtggccaagtgaac 197526

>emb|BX465853.12| Zebrafish DNA sequence from clone DKEY-18F23 in linkage group 23,
             complete sequence
          Length = 220945

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    accatatataaccatttattg 31
             |||||||||||||||||||||
Sbjct: 42137 accatatataaccatttattg 42117

>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14,
             complete sequence
          Length = 168546

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    caccatatataaccatttatt 30
             |||||||||||||||||||||
Sbjct: 26177 caccatatataaccatttatt 26157

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 34       aatatgtaatattgtatcact 54
                |||||||||||||||||||||
Sbjct: 24022381 aatatgtaatattgtatcact 24022361

>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0090K04
          Length = 152556

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     aatatgtaatattgtatcact 54
              |||||||||||||||||||||
Sbjct: 136903 aatatgtaatattgtatcact 136883

>emb|BX248228.3| Zebrafish DNA sequence from clone RP71-40J23 in linkage group 23,
             complete sequence
          Length = 141134

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    accatatataaccatttattg 31
             |||||||||||||||||||||
Sbjct: 40370 accatatataaccatttattg 40350

>gb|AY740402.1| Bos taurus keratin 5 gene, complete cds
          Length = 5994

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ccgggggtggcggcggtggc 364
           ||||||||||||||||||||
Sbjct: 226 ccgggggtggcggcggtggc 245

>gb|AY044084.1|AY044083S2 Homo sapiens 11-beta hydroxysteroid dehydrogenase type 1 (HSD11B1)
            gene, exons 5 and 6 and complete cds
          Length = 5740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    caacaccatatataaccatt 26
            ||||||||||||||||||||
Sbjct: 4327 caacaccatatataaccatt 4308

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     cgcgctggcggcacgctgac 310
               ||||||||||||||||||||
Sbjct: 3259438 cgcgctggcggcacgctgac 3259419

>gb|AC156577.3| Ornithorhynchus anatinus BAC clone OABb-470C16 from chromosome
            unknown, complete sequence
          Length = 153725

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  gccgggggtggcggcggtgg 363
            ||||||||||||||||||||
Sbjct: 1446 gccgggggtggcggcggtgg 1427

>ref|XM_977082.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1
            (Prdm13), mRNA
          Length = 3458

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 2044 ccgggggtggcggcggtggc 2063

>ref|XM_977119.1| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2
            (Prdm13), mRNA
          Length = 3108

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 1694 ccgggggtggcggcggtggc 1713

>ref|XM_920394.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 4
            (Prdm13), mRNA
          Length = 3476

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 2062 ccgggggtggcggcggtggc 2081

>ref|XM_907402.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 3
            (Prdm13), mRNA
          Length = 3126

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 1712 ccgggggtggcggcggtggc 1731

>ref|XM_131309.6| PREDICTED: Mus musculus PR domain containing 13, transcript variant 1
            (Prdm13), mRNA
          Length = 3458

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 2044 ccgggggtggcggcggtggc 2063

>ref|XM_884367.2| PREDICTED: Mus musculus PR domain containing 13, transcript variant 2
            (Prdm13), mRNA
          Length = 3108

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 1694 ccgggggtggcggcggtggc 1713

>gb|BC017632.1| Mus musculus PR domain containing 13, mRNA (cDNA clone
            IMAGE:4507465), containing frame-shift errors
          Length = 3271

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 2044 ccgggggtggcggcggtggc 2063

>gb|AC005485.2| Homo sapiens PAC clone RP5-998M2 from 7, complete sequence
          Length = 4544

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   gtaatattgtatcactgcac 58
            ||||||||||||||||||||
Sbjct: 2196 gtaatattgtatcactgcac 2177

>emb|AL022398.1|HS434O14 Human DNA sequence from clone RP3-434O14 on chromosome 1q32.3-41
             Contains the 3' end of the HSD11B1 gene for hydroxysteroid
             (11-beta) dehydrogenase 1, a adenosine A2b receptor
             (ADORA2B) pseudogene, the T3JAM gene for TRAF3-interacting
             Jun N-terminal kinase (JNK)-activating modulator, a novel
             gene (FLJ25078), the IRF6 gene for interferon regulatory
             factor 6, a novel gene, a novel gene (MGC29875) and the 5'
             end of a novel gene, complete sequence
          Length = 135928

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     caacaccatatataaccatt 26
             ||||||||||||||||||||
Sbjct: 12667 caacaccatatataaccatt 12648

>emb|AL021877.1|HS101G11 Human DNA sequence from clone RP1-101G11 on chromosome 22q12, complete
              sequence
          Length = 150236

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    ttcctagctcaggagacaca 223
              ||||||||||||||||||||
Sbjct: 135573 ttcctagctcaggagacaca 135554

>ref|NM_001008663.1| Bos taurus keratin 5 (epidermolysis bullosa simplex,
           Dowling-Meara/Kobner/Weber-Cockayne types) (KRT5), mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 ccgggggtggcggcggtggc 364
           ||||||||||||||||||||
Sbjct: 113 ccgggggtggcggcggtggc 132

>emb|AL672113.1|MLO672113 Mesorhizobium loti R7A symbiosis island; segment 2/4
          Length = 152050

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  acgcgctggcggcacgctga 309
            ||||||||||||||||||||
Sbjct: 9859 acgcgctggcggcacgctga 9840

>gb|AC146347.4| Pan troglodytes clone rp43-34h2, complete sequence
          Length = 157530

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    ttcctagctcaggagacaca 223
              ||||||||||||||||||||
Sbjct: 106407 ttcctagctcaggagacaca 106388

>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence
          Length = 112187

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    gtcctccctgctgatcatgg 93
             ||||||||||||||||||||
Sbjct: 78721 gtcctccctgctgatcatgg 78702

>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tgccggccgccgggggtggc 355
              ||||||||||||||||||||
Sbjct: 599948 tgccggccgccgggggtggc 599929

>gb|AC021231.8| Homo sapiens chromosome , clone RP11-323I15, complete sequence
          Length = 185062

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   agcatgagcatgagtacatt 205
             ||||||||||||||||||||
Sbjct: 72204 agcatgagcatgagtacatt 72223

>emb|AL672159.14| Mouse DNA sequence from clone RP23-145B5 on chromosome 4, complete
             sequence
          Length = 101291

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ccgggggtggcggcggtggc 364
             ||||||||||||||||||||
Sbjct: 61041 ccgggggtggcggcggtggc 61022

>dbj|AK087343.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030046P19 product:unclassifiable, full
           insert sequence
          Length = 1810

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 337 gccggccgccgggggtggcggcggtggccaag 368
           ||||||||||||||  ||| ||||||||||||
Sbjct: 168 gccggccgccggggtgggctgcggtggccaag 137

>emb|BX324116.7| Zebrafish DNA sequence from clone CH211-114G7 in linkage group 14,
             complete sequence
          Length = 167388

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    accatatataaccatttatt 30
             ||||||||||||||||||||
Sbjct: 90558 accatatataaccatttatt 90539

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     acgcgctggcggcacgctga 309
               ||||||||||||||||||||
Sbjct: 4983442 acgcgctggcggcacgctga 4983461

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 288     gaacgcgctggcggcacgctgact 311
               |||||||||||||||| |||||||
Sbjct: 2877614 gaacgcgctggcggcaggctgact 2877637

>emb|Z32746.1|BTKERAT5 B.taurus gene for keratin 5
          Length = 1946

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  ccgggggtggcggcggtggc 364
            ||||||||||||||||||||
Sbjct: 1495 ccgggggtggcggcggtggc 1514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,283,223
Number of Sequences: 3902068
Number of extensions: 3283223
Number of successful extensions: 71824
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71590
Number of HSP's gapped (non-prelim): 234
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)