Clone Name | rbart16f03 |
---|---|
Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 138 bits (347), Expect = 9e-33 Identities = 71/110 (64%), Positives = 79/110 (71%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+DLM+KFASGVSMVAS+SLAISYPT+AAAPHMFLN YKNVLAVA+ET+YSY HADKIK Sbjct: 209 TEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIK 268 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 EYLKDPSKFAV SDG++G SLFD Sbjct: 269 EYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 318
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 135 bits (340), Expect = 6e-32 Identities = 72/111 (64%), Positives = 79/111 (71%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +EEDL++KFA+GVSMVASLSLAISYPT+AA PHMF+N YKNVLAVA+ETDYSY HADKIK Sbjct: 209 SEEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIK 268 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 151 EYLKDPSKFAV SD EMGFSLFDD Sbjct: 269 EYLKDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFDD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 129 bits (323), Expect = 5e-30 Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+DL+ KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYKNVLAVA+ETDYS+ ADK+K Sbjct: 210 TEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVK 269 Query: 303 EYLKDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 EYLKDPSKFAV SD +MGFSLFD Sbjct: 270 EYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 118 bits (296), Expect = 7e-27 Identities = 61/109 (55%), Positives = 75/109 (68%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+DL++KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYKNVLAVAL T+YS+ A+ +K Sbjct: 210 TEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVK 269 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLF 157 E+LKDP+KFAV SDG+MGF LF Sbjct: 270 EFLKDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 114 bits (284), Expect = 2e-25 Identities = 55/111 (49%), Positives = 71/111 (63%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ T+Y++ A+K+K Sbjct: 209 TEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVK 268 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFDD 151 EYLKDPSKFAV D F LFD+ Sbjct: 269 EYLKDPSKFAVASVAAVSADAGGGAPAAAKVEEKEESDEEDYGGDFGLFDE 319
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 114 bits (284), Expect = 2e-25 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 3/114 (2%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYKN LA+A+ TDY++ A+K+K Sbjct: 209 TEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVK 268 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG---EMGFSLFDD 151 E+LKDPSKF V SD E GF LFD+ Sbjct: 269 EFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFDE 322
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 95.5 bits (236), Expect = 6e-20 Identities = 51/113 (45%), Positives = 64/113 (56%), Gaps = 2/113 (1%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+DL++KFA GVS + P +AAPH+F+NAYKNVLAVA+ T+YS+ AD++K Sbjct: 210 TEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVK 269 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XXXSDGEMGFSLFDD 151 EYLKDPSKFA SD EMGF LFD+ Sbjct: 270 EYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFDE 322
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 88.6 bits (218), Expect = 8e-18 Identities = 45/110 (40%), Positives = 59/110 (53%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L +F GV +AS+ L I YPT+A+ PH +N YK VLAV +ETDY++ A+K+K Sbjct: 210 TEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFPLAEKVK 269 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 YL DP+ FAV SD +MGF LFD Sbjct: 270 AYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEESDEDMGFGLFD 319
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 87.8 bits (216), Expect = 1e-17 Identities = 46/110 (41%), Positives = 58/110 (52%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TEE L +F GV VAS+ L I YPT+A+ PH +N YK VLAVA+ETDY++ A+K+K Sbjct: 207 TEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVK 266 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS F SD +MGF LFD Sbjct: 267 AFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/110 (41%), Positives = 59/110 (53%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L +F GV +AS+ L I YPT+A+ PH +N YK VLA+A+ETDYS+ ADK+K Sbjct: 207 TEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVK 266 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS F V SD +MGF LFD Sbjct: 267 AFLADPSAFVV-AAPVAETAAAPAASAAPAKEEKEESEESDDDMGFGLFD 315
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 84.7 bits (208), Expect = 1e-16 Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TEE L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K Sbjct: 207 TEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVK 266 Query: 303 EYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS F A SD +MGF LFD Sbjct: 267 AFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 84.0 bits (206), Expect = 2e-16 Identities = 39/71 (54%), Positives = 51/71 (71%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L +F GV +AS+ L I YPT+A+ PH +N YK VL VA+ETDYS+ ADK+K Sbjct: 207 TEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVK 266 Query: 303 EYLKDPSKFAV 271 +L DPS+FAV Sbjct: 267 AFLADPSRFAV 277
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 83.6 bits (205), Expect = 3e-16 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 2/112 (1%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TEE L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K Sbjct: 198 TEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVK 257 Query: 303 EYLKDPSKF--AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS F A SD +MGF LFD Sbjct: 258 AFLADPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEESEESDEDMGFGLFD 309
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 83.6 bits (205), Expect = 3e-16 Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ETDY++ A+K+K Sbjct: 207 TEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVK 266 Query: 303 EYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS FA SD +MGF LFD Sbjct: 267 AFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 83.2 bits (204), Expect = 3e-16 Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Frame = -2 Query: 477 EDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEY 298 EDL KF +GV+ +A++SL I YPT+A+APH N +KN+LA+A T+ + A IKE+ Sbjct: 209 EDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFKNLLAIAASTEVEFKQAATIKEF 268 Query: 297 LKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +KDPSKF A D +MGF LFD Sbjct: 269 IKDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESEEDDDMGFGLFD 317
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 82.8 bits (203), Expect = 4e-16 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Frame = -2 Query: 477 EDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIKEY 298 EDL KF GV+ +A++ L++ YPT+A+APH N +KN+LA+A T+ + A IKEY Sbjct: 209 EDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKEATTIKEY 268 Query: 297 LKDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +KDPSKFA D +MGF LFD Sbjct: 269 IKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 81.6 bits (200), Expect = 1e-15 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 TE+ L +F GV VAS+ L I YPT+A+ PH +N YK VLA+++ET+Y++ +K+K Sbjct: 207 TEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFPLTEKVK 266 Query: 303 EYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS FA SD +MGF LFD Sbjct: 267 AFLADPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEESDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 77.0 bits (188), Expect = 2e-14 Identities = 43/110 (39%), Positives = 57/110 (51%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 T E+L +F SGV VAS+SLA++YPT+A+ H N +N+L VA TD S+ A+ IK Sbjct: 206 TTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIK 265 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 ++ DPSKFA SD +MGF LFD Sbjct: 266 AFIADPSKFA----AAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 311
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 72.8 bits (177), Expect = 5e-13 Identities = 37/110 (33%), Positives = 58/110 (52%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +EEDL+ S S++ ++SL +YPT+ + H +NAYKN++AV+L T+Y+++ ++ K Sbjct: 205 SEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNLVAVSLATEYTFEGTEQTK 264 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +L DPS F V SD +MGF LFD Sbjct: 265 AFLADPSAFVV--AAAPAAAAGGEAEAPAAEAAAEEEEESDEDMGFGLFD 312
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 72.4 bits (176), Expect = 6e-13 Identities = 37/110 (33%), Positives = 56/110 (50%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 T+E+L+ F S VS +AS+SLAI YPT+ + H +N YK++LAVA+ Y Y + + Sbjct: 205 TDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPEIEDLV 264 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 + +++P K+A SD +MGF LFD Sbjct: 265 DRIENPEKYA--AAAPAATSAASGDAAPAEEAAAEEEEESDDDMGFGLFD 312
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 72.4 bits (176), Expect = 6e-13 Identities = 35/110 (31%), Positives = 60/110 (54%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 T+ED+++KF+ GVS VA+LS A T A+ PH+F+ A+KN++A+ +++DY++ +K Sbjct: 207 TDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDSDYTFPLMKILK 266 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 +++++P FA DG MGF +FD Sbjct: 267 KWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMGFGMFD 316
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 72.4 bits (176), Expect = 6e-13 Identities = 30/60 (50%), Positives = 47/60 (78%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +EEDL++KF G+ +A++SL I YPT+A+ PH +NA+KN+LA++ ET Y++D A+K K Sbjct: 203 SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAISFETSYTFDAAEKFK 262
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 71.2 bits (173), Expect = 1e-12 Identities = 35/110 (31%), Positives = 58/110 (52%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 T+E +++ FA+G + VA++S A+ P+ AAAPH L A++N A+ L+T + + ++K Sbjct: 206 TDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFRNCAALCLDTPFCFPQMQRLK 265 Query: 303 EYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMGFSLFD 154 E +++P+ FA DG+MGFSLFD Sbjct: 266 EMVENPAAFA-AAAAPAAAAPAAAPAAAAKAPEPEEEEEEDGDMGFSLFD 314
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 66.6 bits (161), Expect = 3e-11 Identities = 28/70 (40%), Positives = 51/70 (72%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +EE L+ F++ ++ +ASLSLA+++PT+ + H +NAYK VLAVA+ET+ S+ +++K Sbjct: 205 SEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKVLAVAIETEISWPEIEELK 264 Query: 303 EYLKDPSKFA 274 + + +P +A Sbjct: 265 DRIANPEAYA 274
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 64.7 bits (156), Expect = 1e-10 Identities = 26/70 (37%), Positives = 51/70 (72%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHADKIK 304 +EE L+ F+S ++ +A++SLA+++PT+ + H +N+YK VLAVA+ET+ S+ +++K Sbjct: 205 SEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKVLAVAIETEISWPEIEELK 264 Query: 303 EYLKDPSKFA 274 + + +P +A Sbjct: 265 DRIANPEAYA 274
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/33 (78%), Positives = 31/33 (93%) Frame = -2 Query: 483 TEEDLMDKFASGVSMVASLSLAISYPTMAAAPH 385 TE+DL+ +FA+GVSMV SLSLAISYPT+AAAPH Sbjct: 210 TEDDLLARFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 50.4 bits (119), Expect = 2e-06 Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%) Frame = -2 Query: 477 EDLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYDHAD 313 +D+++K+ G+S VA+LSL PT A PHM ++A+K +L ++ T+Y +D D Sbjct: 215 DDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLGASVATEYEFDEFD 270
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = -2 Query: 477 EDLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 322 ED+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 214 EDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 266
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = -2 Query: 477 EDLMDKFA-SGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVALETDYSYD 322 ED+++K G+S VA+++L PT + M ++A+KN+LAV++ T Y ++ Sbjct: 215 EDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNLLAVSVATSYEFE 267
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 28.9 bits (63), Expect = 7.5 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 384 CAVQQPWWGMRSPGTVRQPWKHQKQTCPS 470 CA + P WG R+ G R K+ K CP+ Sbjct: 80 CACEAPQWGRRTRGPGRVSCKNIKPECPT 108
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 7.5 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 315 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 398 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587
>Y421_METJA (Q57864) Hypothetical protein MJ0421| Length = 360 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%) Frame = -2 Query: 366 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 271 + VL V ET+ +D A+KIK+Y+K+ FAV Sbjct: 58 ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93
>HIP1_ECTMO (P83341) High-potential iron-sulfur protein isozyme 1 (HiPIP 1)| Length = 72 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 10/45 (22%) Frame = -1 Query: 484 H*GRSDGQVCFWC----------FHGCLTVPGDLIPHHGCCTAHV 380 H +GQ C C + GC PG L+ +G CTA+V Sbjct: 25 HDSYQEGQKCINCLLYTDPSQEEWGGCAVFPGKLVNANGWCTAYV 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,390,254 Number of Sequences: 219361 Number of extensions: 938817 Number of successful extensions: 2757 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2672 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2750 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)