>ref|NM_185496.1| Oryza sativa (japonica cultivar-group), Ozsa8593 predicted mRNA
          Length = 978

 Score =  190 bits (96), Expect = 3e-45
 Identities = 261/316 (82%)
 Strand = Plus / Minus

                                                                       
Query: 161 cggcagtacgccttccttcttggccatctcatacagagctatggccgagagcgccttcaa 220
           |||||| | ||||||| ||||||||||||| ||||| || |||||   |||||||||   
Sbjct: 924 cggcaggaggccttccctcttggccatctcgtacagggcgatggcgctgagcgccttggc 865

                                                                       
Query: 221 gtctgctgtcgagcgccagagctggtcgtaggggaccacacgcagcttgatcagctcgcc 280
           ||| || || | |||||| ||||||  ||| || ||||| ||||||||||||||||||||
Sbjct: 864 gtcggcggtggcgcgccacagctggctgtacggcaccacccgcagcttgatcagctcgcc 805

                                                                       
Query: 281 atggtcccggaggcccgtttccttcccttggagagctctgatggtctcgtcgtccacatg 340
           |||||| || || || || ||||||||||||||||| || | ||| || |||||  | ||
Sbjct: 804 atggtcgcgcagcccagtctccttcccttggagagccctaagggtgtcctcgtcggcgtg 745

                                                                       
Query: 341 ccccctgtaaaggaacaggccaatctcttcgtcacagccacccggtgatggaagcatttt 400
            || ||||| |||||||| |||||||||||||| |||||||||||||| ||||||||| |
Sbjct: 744 gcctctgtacaggaacagcccaatctcttcgtcgcagccacccggtgaaggaagcattct 685

                                                                       
Query: 401 gcacccagtagcagggtccagcaaagcggtaagatcaaccatgtcctccaaatttaactt 460
           ||| |||||  |||||| |||||| || ||||| |||| ||| ||||| ||||||| |||
Sbjct: 684 gcatccagtgtcagggttcagcaatgcagtaaggtcaatcatatcctctaaatttagctt 625

                           
Query: 461 tatgccagtttcttct 476
            || ||||||||||||
Sbjct: 624 aattccagtttcttct 609

>gb|AY109684.1| Zea mays CL10045_1 mRNA sequence
          Length = 886

 Score =  176 bits (89), Expect = 4e-41
 Identities = 260/317 (82%)
 Strand = Plus / Plus

                                                                       
Query: 160 gcggcagtacgccttccttcttggccatctcatacagagctatggccgagagcgccttca 219
           ||||||| | ||||||| ||||||||||||| ||||| ||||| || ||||| || ||| 
Sbjct: 127 gcggcagcaggccttccctcttggccatctcgtacagggctatcgcggagagtgctttcg 186

                                                                       
Query: 220 agtctgctgtcgagcgccagagctggtcgtaggggaccacacgcagcttgatcagctcgc 279
            |||  | ||||| |||||||||| |  ||| || ||||| ||||||||||||||||| |
Sbjct: 187 cgtcgccggtcgaccgccagagctcgctgtacggaaccacgcgcagcttgatcagctcac 246

                                                                       
Query: 280 catggtcccggaggcccgtttccttcccttggagagctctgatggtctcgtcgtccacat 339
           |  |||| || || || ||||||||||| ||||| | ||| |||||||| ||||| ||  
Sbjct: 247 cggggtcgcgcagcccggtttccttcccctggagcgatcttatggtctcctcgtcaacgc 306

                                                                       
Query: 340 gccccctgtaaaggaacaggccaatctcttcgtcacagccacccggtgatggaagcattt 399
           | |||||||| |||||||||||||||| |||||| ||||||||||| ||||| |||||| 
Sbjct: 307 ggcccctgtacaggaacaggccaatcttttcgtcgcagccacccggggatggtagcattc 366

                                                                       
Query: 400 tgcacccagtagcagggtccagcaaagcggtaagatcaaccatgtcctccaaatttaact 459
             |  |||||||||||||||||||  || ||||||||||||||||| || | ||| | ||
Sbjct: 367 gacctccagtagcagggtccagcagggccgtaagatcaaccatgtcttctatattcagct 426

                            
Query: 460 ttatgccagtttcttct 476
           |||| ||||| ||||||
Sbjct: 427 ttataccagtctcttct 443

>gb|BT018997.1| Zea mays clone Contig485.F mRNA sequence
          Length = 795

 Score =  168 bits (85), Expect = 1e-38
 Identities = 259/317 (81%)
 Strand = Plus / Minus

                                                                       
Query: 160 gcggcagtacgccttccttcttggccatctcatacagagctatggccgagagcgccttca 219
           ||||||| | ||||||| ||||||||||||| ||||| ||||| || || || || ||| 
Sbjct: 595 gcggcagcaggccttccctcttggccatctcgtacagggctatcgcggaaagggctttcg 536

                                                                       
Query: 220 agtctgctgtcgagcgccagagctggtcgtaggggaccacacgcagcttgatcagctcgc 279
            |||  | ||||| ||||| |||| |  ||| || ||| | ||||||||||||||||| |
Sbjct: 535 cgtccccggtcgaccgccaaagctcgctgtacggaaccccccgcagcttgatcagctcac 476

                                                                       
Query: 280 catggtcccggaggcccgtttccttcccttggagagctctgatggtctcgtcgtccacat 339
           | ||||| || || || ||||||||||| ||||| | ||| |||||||| ||||| ||  
Sbjct: 475 cgtggtcgcgcagcccggtttccttcccctggagcgatcttatggtctcctcgtcaacgc 416

                                                                       
Query: 340 gccccctgtaaaggaacaggccaatctcttcgtcacagccacccggtgatggaagcattt 399
           | |||||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| 
Sbjct: 415 ggcccctgtacaggaacaggccaatctcttcgtcgcagccccccggtgatggtagcattc 356

                                                                       
Query: 400 tgcacccagtagcagggtccagcaaagcggtaagatcaaccatgtcctccaaatttaact 459
             |  |||||||||||||||||||  || ||||||||||||||||| || | ||| | ||
Sbjct: 355 gacctccagtagcagggtccagcagtgccgtaagatcaaccatgtcttctatattcagct 296

                            
Query: 460 ttatgccagtttcttct 476
           |||| ||||| ||||||
Sbjct: 295 ttataccagtctcttct 279

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  125 bits (63), Expect = 1e-25
 Identities = 183/223 (82%)
 Strand = Plus / Plus

                                                                           
Query: 161     cggcagtacgccttccttcttggccatctcatacagagctatggccgagagcgccttcaa 220
               |||||| | ||||||| ||||||||||||| ||||| || |||||   |||||||||   
Sbjct: 1573850 cggcaggaggccttccctcttggccatctcgtacagggcgatggcgctgagcgccttggc 1573909

                                                                           
Query: 221     gtctgctgtcgagcgccagagctggtcgtaggggaccacacgcagcttgatcagctcgcc 280
               ||| || || | |||||| ||||||  ||| || ||||| ||||||||||||||||||||
Sbjct: 1573910 gtcggcggtggcgcgccacagctggctgtacggcaccacccgcagcttgatcagctcgcc 1573969

                                                                           
Query: 281     atggtcccggaggcccgtttccttcccttggagagctctgatggtctcgtcgtccacatg 340
               |||||| || || || || ||||||||||||||||| || | ||| || |||||  | ||
Sbjct: 1573970 atggtcgcgcagcccagtctccttcccttggagagccctaagggtgtcctcgtcggcgtg 1574029

                                                          
Query: 341     ccccctgtaaaggaacaggccaatctcttcgtcacagccaccc 383
                || ||||| |||||||| |||||||||||||| |||||||||
Sbjct: 1574030 gcctctgtacaggaacagcccaatctcttcgtcgcagccaccc 1574072



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                           
Query: 382     ccggtgatggaagcattttgcacccagtagcagggtccagcaaagcggtaagatcaacca 441
               ||||||| ||||||||| |||| |||||  |||||| |||||| || ||||| |||| ||
Sbjct: 1574579 ccggtgaaggaagcattctgcatccagtgtcagggttcagcaatgcagtaaggtcaatca 1574638

                                                  
Query: 442     tgtcctccaaatttaactttatgccagtttcttct 476
               | ||||| ||||||| ||| || ||||||||||||
Sbjct: 1574639 tatcctctaaatttagcttaattccagtttcttct 1574673

>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0538C01
          Length = 155643

 Score =  125 bits (63), Expect = 1e-25
 Identities = 183/223 (82%)
 Strand = Plus / Plus

                                                                          
Query: 161    cggcagtacgccttccttcttggccatctcatacagagctatggccgagagcgccttcaa 220
              |||||| | ||||||| ||||||||||||| ||||| || |||||   |||||||||   
Sbjct: 102574 cggcaggaggccttccctcttggccatctcgtacagggcgatggcgctgagcgccttggc 102633

                                                                          
Query: 221    gtctgctgtcgagcgccagagctggtcgtaggggaccacacgcagcttgatcagctcgcc 280
              ||| || || | |||||| ||||||  ||| || ||||| ||||||||||||||||||||
Sbjct: 102634 gtcggcggtggcgcgccacagctggctgtacggcaccacccgcagcttgatcagctcgcc 102693

                                                                          
Query: 281    atggtcccggaggcccgtttccttcccttggagagctctgatggtctcgtcgtccacatg 340
              |||||| || || || || ||||||||||||||||| || | ||| || |||||  | ||
Sbjct: 102694 atggtcgcgcagcccagtctccttcccttggagagccctaagggtgtcctcgtcggcgtg 102753

                                                         
Query: 341    ccccctgtaaaggaacaggccaatctcttcgtcacagccaccc 383
               || ||||| |||||||| |||||||||||||| |||||||||
Sbjct: 102754 gcctctgtacaggaacagcccaatctcttcgtcgcagccaccc 102796



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 80/95 (84%)
 Strand = Plus / Plus

                                                                          
Query: 382    ccggtgatggaagcattttgcacccagtagcagggtccagcaaagcggtaagatcaacca 441
              ||||||| ||||||||| |||| |||||  |||||| |||||| || ||||| |||| ||
Sbjct: 103303 ccggtgaaggaagcattctgcatccagtgtcagggttcagcaatgcagtaaggtcaatca 103362

                                                 
Query: 442    tgtcctccaaatttaactttatgccagtttcttct 476
              | ||||| ||||||| ||| || ||||||||||||
Sbjct: 103363 tatcctctaaatttagcttaattccagtttcttct 103397

>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             6/17
          Length = 349071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 447   tccaaatttaactttatgccagttt 471
             |||||||| ||||||||||||||||
Sbjct: 22450 tccaaattcaactttatgccagttt 22474

>ref|XM_633288.1| Dictyostelium discoideum hypothetical protein (DDB0186166), partial
            mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   actggtgatattggttatgt 69
            ||||||||||||||||||||
Sbjct: 1282 actggtgatattggttatgt 1301

>ref|XM_633287.1| Dictyostelium discoideum hypothetical protein (DDB0186164), partial
            mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   actggtgatattggttatgt 69
            ||||||||||||||||||||
Sbjct: 1618 actggtgatattggttatgt 1637

>gb|DQ141103.1| Bombyx mori Dscam gene, partial sequence
          Length = 57601

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   tttaactttatgccagtttc 472
             ||||||||||||||||||||
Sbjct: 51086 tttaactttatgccagtttc 51067

>gb|DQ438472.1| Uncultured bacterium clone ECS-P7-D36 16S ribosomal RNA gene,
           partial sequence
          Length = 970

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 agcgccttcaagtctgctgt 229
           ||||||||||||||||||||
Sbjct: 101 agcgccttcaagtctgctgt 120

>gb|DQ438414.1| Uncultured bacterium clone ECS-P7-C21 16S ribosomal RNA gene,
           partial sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 agcgccttcaagtctgctgt 229
           ||||||||||||||||||||
Sbjct: 71  agcgccttcaagtctgctgt 90

>emb|AL138819.9| Human DNA sequence from clone RP11-366O17 on chromosome 13 Contains
           part of a novel gene and part of a gene similar to MEST
           (mesoderm specific transcript (mouse) homolog), complete
           sequence
          Length = 86254

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 actttatgccagtttcttct 476
           ||||||||||||||||||||
Sbjct: 587 actttatgccagtttcttct 568

>gb|AC108710.3| Homo sapiens 3p BAC RP11-88I7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ttccttcttggccatctcat 192
             ||||||||||||||||||||
Sbjct: 77165 ttccttcttggccatctcat 77146

>gb|AC024890.20| Homo sapiens 3 BAC RP11-389A20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172117

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ttccttcttggccatctcat 192
             ||||||||||||||||||||
Sbjct: 74717 ttccttcttggccatctcat 74698

>gb|AC154294.2| Mus musculus BAC clone RP23-431B18 from 16, complete sequence
          Length = 204507

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   actttatgccagtttcttct 476
             ||||||||||||||||||||
Sbjct: 74297 actttatgccagtttcttct 74278

>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3),
              anthocyanin biosynthesis regulatory protein Pl1_B73
              (Z576C20.4), putative growth-regulating factor 1
              (Z576C20.6), and putative aminoalcoholphosphotransferase
              (Z576C20.14) genes, complete cds; and putative receptor
              protein kinase (Z576C20.21) gene, partial cds
          Length = 155173

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    caaccatgtcctccaaattt 455
              ||||||||||||||||||||
Sbjct: 103633 caaccatgtcctccaaattt 103614

>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105,
             complete sequence
          Length = 127990

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    cttccaccaccaaacttgct 31
             ||||||||||||||||||||
Sbjct: 88705 cttccaccaccaaacttgct 88686

>gb|AC154735.2| Mus musculus BAC clone RP24-383B6 from chromosome 16, complete sequence
          Length = 224440

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    ttccttcttggccatctcat 192
              ||||||||||||||||||||
Sbjct: 179586 ttccttcttggccatctcat 179605

>emb|AL831734.10| Mouse DNA sequence from clone RP23-426J13 on chromosome X, complete
              sequence
          Length = 208106

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 441    atgtcctccaaatttaactttatg 464
              |||||||||| |||||||||||||
Sbjct: 104738 atgtcctccagatttaactttatg 104715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,426,558
Number of Sequences: 3902068
Number of extensions: 3426558
Number of successful extensions: 59576
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59522
Number of HSP's gapped (non-prelim): 45
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)