ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart16d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrins... 391 e-105
2gb|BT016583.1| Zea mays clone Contig416 mRNA sequence 70 6e-09
3gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds 70 6e-09
4gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein... 70 6e-09
5gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, comp... 70 6e-09
6gb|AY109332.1| Zea mays CL502_5 mRNA sequence 70 6e-09
7ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
8ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group... 62 1e-06
9ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group... 62 1e-06
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
11gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein... 62 1e-06
12dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA ... 62 1e-06
13dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
14dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
15dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
16dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
17dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
18dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
19ref|XM_475029.1| Oryza sativa (japonica cultivar-group), predic... 46 0.082
20emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4,... 46 0.082
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.082
22dbj|AK102155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.082
23dbj|AK061491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.082
24dbj|AK061312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.082
25dbj|AK119661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
26gb|AE000657.1| Aquifex aeolicus VF5, complete genome 42 1.3
27gb|DQ202709.1| Olea europaea plasma membrane intrinsic protein (... 40 5.1
28gb|BC027782.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, m... 40 5.1
29gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, compl... 40 5.1
30emb|BX545848.23| Zebrafish DNA sequence from clone DKEY-8O19 in ... 40 5.1
31gb|AC025207.5| Homo sapiens chromosome 8, clone RP11-193J8, comp... 40 5.1
32emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on ch... 40 5.1
33gb|BC057087.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, m... 40 5.1
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
35dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
36dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
37gb|AF092536.1|AF092536 Mus musculus heat shock protein hsp40-3 g... 40 5.1
38emb|BX248523.8| Zebrafish DNA sequence from clone CH211-257G8 in... 40 5.1
39gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence... 40 5.1
40ref|NM_019874.3| Mus musculus DnaJ (Hsp40) homolog, subfamily B,... 40 5.1
41gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 5.1
42dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 5.1
43emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chro... 40 5.1
44dbj|AB058678.1| Pyrus communis Py-PIP2-1 mRNA for plasma membran... 40 5.1
45dbj|AP003548.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.1 
>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA,
            complete cds
          Length = 1283

 Score =  391 bits (197), Expect = e-105
 Identities = 342/384 (89%), Gaps = 16/384 (4%)
 Strand = Plus / Minus

                                                                        
Query: 12   cttgcttggcggattgatgatttggatagaa-ggtggcgacgttgggtcgatcatacata 70
            ||||||||| |||||||||| || ||||||| |||||||||||||| |||||||||||||
Sbjct: 1273 cttgcttggtggattgatgacttagatagaaaggtggcgacgttggatcgatcatacata 1214

                                                                        
Query: 71   tggtcgctaaattaaaaca------ggaaaaggaatgcgggctaattaagacaagcgatc 124
            ||||||||||||| ||| |      ||||||| |||||||||||||||||||||||||||
Sbjct: 1213 tggtcgctaaatttaaatacaagtaggaaaagcaatgcgggctaattaagacaagcgatc 1154

                                                                        
Query: 125  ccatggaccgaattacaacacacggcacgcatgactgggc-acatac---gcatatgcag 180
            |||||||||||||||||| |||||||||||||||| || | || |||   ||||||||||
Sbjct: 1153 ccatggaccgaattacaagacacggcacgcatgaccggaccacgtactacgcatatgcag 1094

                                                                        
Query: 181  ctgccgacacataaataacacgaccattgcagcggcc-aactgaactgtcgagaagttgc 239
            |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1093 ctgccgacacataa-taacacgaccattgcggcggccgaactgaactgtcgagaagttgc 1035

                                                                        
Query: 240  aaaagcggctttctctttggatggatggacacagcacaggtcgccattgcttcaatcttg 299
            |||||||  ||||||| |||||||||||||||| ||| |||||||||||||||| |||||
Sbjct: 1034 aaaagcgcatttctctctggatggatggacacaacacgggtcgccattgcttcagtcttg 975

                                                                        
Query: 300  catgcacatcacatg---gataactcgttacgcgttgctcctgaaagagcccagggcctt 356
            ||| || || |||||   ||||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 974  catacagatgacatggatgataacttgttacgcgttgctcctgaaggagccgagggcctt 915

                                    
Query: 357  gatggcgcccgccctgagtatgta 380
            ||||||||| |||||||| |||||
Sbjct: 914  gatggcgccggccctgaggatgta 891
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>gb|BT016583.1| Zea mays clone Contig416 mRNA sequence
          Length = 1348

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 924 acgcgttgctcctgaaggagccgagggccttgatggcgccagcccggaggatgta 870
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>gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds
          Length = 1133

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 872 acgcgttgctcctgaaggagccgagggccttgatggcgccagcccggaggatgta 818
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>gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein ZmPIP2-2 mRNA, complete
           cds
          Length = 1268

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| || ||||||||||||||||||| ||| |||||
Sbjct: 996 acgcgttgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgta 942
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>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds
          Length = 1328

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||||||||||||||| |||| ||| |||||
Sbjct: 968 acgcgttgctcctgaaggagccgagggccttgatggcgccggcccggaggatgta 914
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>gb|AY109332.1| Zea mays CL502_5 mRNA sequence
          Length = 1969

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 326  acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
            |||||||||||||||| ||||| || ||||||||||||||||||| ||| |||||
Sbjct: 1646 acgcgttgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgta 1592
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>ref|NM_187092.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1242

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 924
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>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117
           mRNA
          Length = 1257

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 980 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 926
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>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117
           mRNA
          Length = 1298

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 981 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 927
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 326      acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
                |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 15355852 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 15355798
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>gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein ZmPIP2-1 mRNA, complete
           cds
          Length = 1171

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| |||||||||||||| || |||| ||| |||||
Sbjct: 943 acgcgttgctcctgaaggagccgagggccttgatggccccagcccggaggatgta 889
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>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel
           protein, partial cds
          Length = 880

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||||||||||| ||| |||| ||| |||||
Sbjct: 544 acgcgttgctcctgaaggagccgagggccttgatggggccggcccggaggatgta 490
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 326   acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
             |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 62851 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 62797
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>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full
           insert sequence
          Length = 1216

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 924
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>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full
           insert sequence
          Length = 1451

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 572 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 518
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>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full
           insert sequence
          Length = 1242

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 924
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>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full
           insert sequence
          Length = 1298

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||| ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 981 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgta 927
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>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full
           insert sequence
          Length = 1257

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 326 acgcgttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||||  ||||| ||||| ||||||||||| |||| ||| |||||
Sbjct: 980 acgcgttgctcctgagggagccgagggctttgatggcgccggcccggaggatgta 926
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>ref|XM_475029.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 330 gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 837 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 787
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>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06,
             complete sequence
          Length = 127420

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 330   gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
             |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 91012 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 91062
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                  
Query: 330     gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
               |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 8906703 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 8906753
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>dbj|AK102155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E18, full
           insert sequence
          Length = 1308

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 330 gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 936 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 886
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>dbj|AK061491.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B05, full
           insert sequence
          Length = 1309

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 330 gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 930 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 880
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>dbj|AK061312.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B10, full
           insert sequence
          Length = 1296

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 330 gttgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 924 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 874
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>dbj|AK119661.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B01, full
           insert sequence
          Length = 1067

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 332 tgctcctgaaagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||| ||| |||||||| |||||||||||  |||||| ||| |||||
Sbjct: 821 tgctccggaaggagcccagcgccttgatggctgccgcccggaggatgta 773
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     aaattaaaacaggaaaaggaa 99
              |||||||||||||||||||||
Sbjct: 624952 aaattaaaacaggaaaaggaa 624932
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>gb|DQ202709.1| Olea europaea plasma membrane intrinsic protein (pip2) mRNA,
           complete cds
          Length = 1260

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/55 (85%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                  
Query: 328 gcgttgctcctga--aagagcccagggccttgatggcgcccgccctgagtatgta 380
           |||||||||||||  |||| ||||| ||||||||||| || ||||| || |||||
Sbjct: 941 gcgttgctcctgagaaagatcccagtgccttgatggctcctgcccttaggatgta 887
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>gb|BC027782.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 5, mRNA (cDNA
            clone IMAGE:5354756)
          Length = 5091

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  tcctgaaagagcccagggcc 354
            ||||||||||||||||||||
Sbjct: 2792 tcctgaaagagcccagggcc 2773
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>gb|AC016250.5| Homo sapiens chromosome 8 clone RP11-516P9, complete sequence
          Length = 199569

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ttaaaacaggaaaaggaatg 101
             ||||||||||||||||||||
Sbjct: 92945 ttaaaacaggaaaaggaatg 92926
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>emb|BX545848.23| Zebrafish DNA sequence from clone DKEY-8O19 in linkage group 20 Contains
              the gene for a novel protein (zgc:63746), the gene for a
              novel protein (zgc:55614), the gene for the 5' end of a
              novel protein similar to mouse and human cyclin-dependent
              kinase (CDC2-like) 11 (CDK11), the gene for a novel protein
              similar to vertebrate mitogen-activated protein kinase
              kinase kinase 5 (MAP3K5), a novel gene and eleven CpG
              islands, complete sequence
          Length = 199986

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     gctaaattaaaacaggaaaa 95
              ||||||||||||||||||||
Sbjct: 129625 gctaaattaaaacaggaaaa 129606
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>gb|AC025207.5| Homo sapiens chromosome 8, clone RP11-193J8, complete sequence
          Length = 157375

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     ttaaaacaggaaaaggaatg 101
              ||||||||||||||||||||
Sbjct: 143776 ttaaaacaggaaaaggaatg 143795
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>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the
             3' end of the Ulk2 gene for Unc-51 like kinase 2 (C.
             elegans), the Prpsap2 gene for phosphoribosyl
             pyrophosphate synthetase-associated protein 2, the gene
             for a novel sodium/glucose cotransporter protein, the gene
             for a novel protein (2310040C09Rik), the Grap gene for
             GRB2-related adaptor protein and a CpG island, complete
             sequence
          Length = 186359

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tttctctttggatggatgga 268
             ||||||||||||||||||||
Sbjct: 79799 tttctctttggatggatgga 79818
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>gb|BC057087.1| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 5, mRNA
           (cDNA clone MGC:73423 IMAGE:5695243), complete cds
          Length = 2327

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 tcctgaaagagcccagggcc 354
           ||||||||||||||||||||
Sbjct: 49  tcctgaaagagcccagggcc 30
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaattaaaacaggaaaagga 98
              ||||||||||||||||||||
Sbjct: 751943 aaattaaaacaggaaaagga 751962
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>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaattaaaacaggaaaagga 98
             ||||||||||||||||||||
Sbjct: 30074 aaattaaaacaggaaaagga 30093
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>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1399_H05
          Length = 147670

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     aaattaaaacaggaaaagga 98
              ||||||||||||||||||||
Sbjct: 108838 aaattaaaacaggaaaagga 108857
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>gb|AF092536.1|AF092536 Mus musculus heat shock protein hsp40-3 gene, complete cds
          Length = 9693

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  tcctgaaagagcccagggcc 354
            ||||||||||||||||||||
Sbjct: 4022 tcctgaaagagcccagggcc 4003
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>emb|BX248523.8| Zebrafish DNA sequence from clone CH211-257G8 in linkage group 20,
             complete sequence
          Length = 169849

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gctaaattaaaacaggaaaa 95
             ||||||||||||||||||||
Sbjct: 35269 gctaaattaaaacaggaaaa 35288
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>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence
          Length = 124230

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    tcctgaaagagcccagggcc 354
              ||||||||||||||||||||
Sbjct: 115499 tcctgaaagagcccagggcc 115518
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>ref|NM_019874.3| Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 5 (Dnajb5),
           mRNA
          Length = 2327

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 tcctgaaagagcccagggcc 354
           ||||||||||||||||||||
Sbjct: 49  tcctgaaagagcccagggcc 30
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      tatggtcgctaaattaaaac 88
               ||||||||||||||||||||
Sbjct: 4757676 tatggtcgctaaattaaaac 4757657
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 69      tatggtcgctaaattaaaac 88
               ||||||||||||||||||||
Sbjct: 4688695 tatggtcgctaaattaaaac 4688676
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>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
             sequence
          Length = 208030

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   tcctgaaagagcccagggcc 354
             ||||||||||||||||||||
Sbjct: 89350 tcctgaaagagcccagggcc 89331
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>dbj|AB058678.1| Pyrus communis Py-PIP2-1 mRNA for plasma membrane intrinsic protein
           2-1, complete cds
          Length = 1311

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 331 ttgctcctgaaagagcccagggccttgatggc 362
           ||||| |||||||| ||||| |||||||||||
Sbjct: 907 ttgcttctgaaagatcccagagccttgatggc 876
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>dbj|AP003548.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1448A5
          Length = 178420

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     ttaaaacaggaaaaggaatg 101
              ||||||||||||||||||||
Sbjct: 145388 ttaaaacaggaaaaggaatg 145407


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,278,058
Number of Sequences: 3902068
Number of extensions: 3278058
Number of successful extensions: 52348
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 52193
Number of HSP's gapped (non-prelim): 153
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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