Clone Name | rbart16d02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 18858210 gctgctgatcgtcgggcttcttgtaggaggggttgaaggcggcctgctcggcgcagtcgc 18858151 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggtagta 451 ||||| ||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 18858150 ggttgtcgccggagtgctcgcggccgacgcccatgaggtcgaggtagta 18858102
>dbj|AK103755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143D05, full insert sequence Length = 1649 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1295 gctgctgatcgtcgggcttcttgtaggaggggttgaaggcggcctgctcggcgcagtcgc 1236 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggtagta 451 ||||| ||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 1235 ggttgtcgccggagtgctcgcggccgacgcccatgaggtcgaggtagta 1187
>dbj|AK069564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019G16, full insert sequence Length = 1455 Score = 121 bits (61), Expect = 2e-24 Identities = 97/109 (88%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 1078 gctgctgatcgtcgggcttcttgtaggaggggttgaaggcggcctgctcggcgcagtcgc 1019 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggtagta 451 ||||| ||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 1018 ggttgtcgccggagtgctcgcggccgacgcccatgaggtcgaggtagta 970
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| ||| |||||||||| | ||||||||||||| ||| Sbjct: 6639818 gctgctggtcgtcgggcttcttgtgggacgggttgaaggcgacctgctcggcgcaatcgc 6639759 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggt 447 ||||| || ||| |||||||| ||| |||||||||||||||| Sbjct: 6639758 ggttgtcaccagagtgctcgcggacgacacccatgaggtcgaggt 6639714
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| ||| |||||||||| | ||||||||||||| ||| Sbjct: 6639693 gctgctggtcgtcgggcttcttgtgggacgggttgaaggcgacctgctcggcgcaatcgc 6639634 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggt 447 ||||| || ||| |||||||| ||| |||||||||||||||| Sbjct: 6639633 ggttgtcaccagagtgctcgcggacgacacccatgaggtcgaggt 6639589
>emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC OJ1722_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 171861 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 343 gctgctgctcgtcgtccttcttgggggcggggttgaagggggcctgctcggcgcagtcga 402 ||||||| |||||| ||||||| ||| |||||||||| | ||||||||||||| ||| Sbjct: 57823 gctgctggtcgtcgggcttcttgtgggacgggttgaaggcgacctgctcggcgcaatcgc 57764 Query: 403 ggttgaggccggagcgctcgcggccgaagcccatgaggtcgaggt 447 ||||| || ||| |||||||| ||| |||||||||||||||| Sbjct: 57763 ggttgtcaccagagtgctcgcggacgacacccatgaggtcgaggt 57719
>gb|AF526162.1| Peromyscus maniculatus microsatellite BW4-8 sequence Length = 441 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 167 attcacatacacaagcacatacatac 192 |||||||||||||||||||||||||| Sbjct: 144 attcacatacacaagcacatacatac 119
>gb|AY105990.1| Zea mays PCO087835 mRNA sequence Length = 1619 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 371 ggggttgaagggggcctgctcggcgcagtcgaggttgaggccggagcgctcgcggccgaa 430 ||||||||| || |||||||||||||| || ||||| ||| ||| |||| ||||||| Sbjct: 1256 ggggttgaacggtgcctgctcggcgcaatcacggttgtcgccagagtgctcacggccgac 1197 Query: 431 gcccatgaggtcgaggta 448 ||||||||| || ||||| Sbjct: 1196 gcccatgagatcaaggta 1179
>gb|BC063703.1| Homo sapiens PI-3-kinase-related kinase SMG-1 pseudogene, mRNA (cDNA clone MGC:70616 IMAGE:4536703), complete cds Length = 2390 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1368 gatcagctacccaaaatggctccaaa 1343
>ref|NG_005305.1| Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3/GIY-YIG domain containing 1 region (SULT1A3/GIYD1@) on chromosome 16 Length = 152926 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 110126 gatcagctacccaaaatggctccaaa 110151
>ref|NM_015092.3| Homo sapiens PI-3-kinase-related kinase SMG-1 (SMG1), mRNA Length = 15739 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1083 gatcagctacccaaaatggctccaaa 1058
>gb|AC182396.3| Pan troglodytes BAC clone CH251-244D19 from chromosome 16, complete sequence Length = 175231 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 114830 gatcagctacccaaaatggctccaaa 114805
>gb|AC127457.3| Homo sapiens chromosome 16 clone RP11-100F10, complete sequence Length = 86390 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1022 gatcagctacccaaaatggctccaaa 1047
>gb|AC003007.1|HUAC003007 Human Chromosome 16 BAC clone CIT987SK-A-61E3, complete sequence Length = 113916 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 69034 gatcagctacccaaaatggctccaaa 69009
>gb|AC106782.5| Homo sapiens chromosome 16 clone RP11-347C12, complete sequence Length = 181001 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 102200 gatcagctacccaaaatggctccaaa 102225
>gb|AC009124.8| Homo sapiens chromosome 16 clone RP11-489A11, complete sequence Length = 168268 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 85658 gatcagctacccaaaatggctccaaa 85683
>gb|AF395444.1| Homo sapiens PI-3-kinase ATX mRNA, complete cds Length = 12464 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 730 gatcagctacccaaaatggctccaaa 705
>gb|AC182429.3| Pan troglodytes BAC clone CH251-654H2 from chromosome 16, complete sequence Length = 173460 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 138894 gatcagctacccaaaatggctccaaa 138869
>dbj|AK097897.1| Homo sapiens cDNA FLJ40578 fis, clone THYMU2007532 Length = 1926 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 938 gatcagctacccaaaatggctccaaa 913
>gb|AC120780.32| Pan troglodytes clone rp43-22b16, complete sequence Length = 193047 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 109017 gatcagctacccaaaatggctccaaa 108992
>gb|AC182463.3| Pan troglodytes BAC clone CH251-511B8 from chromosome 16, complete sequence Length = 194406 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 43699 gatcagctacccaaaatggctccaaa 43724
>ref|XM_496125.2| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 1 (LOC440345), mRNA Length = 8301 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933742.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 12 (LOC440345), mRNA Length = 8049 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 459 gatcagctacccaaaatggctccaaa 434
>ref|XM_933731.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 11 (LOC440345), mRNA Length = 7424 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933727.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 10 (LOC440345), mRNA Length = 6981 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933724.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 9 (LOC440345), mRNA Length = 2878 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933722.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 8 (LOC440345), mRNA Length = 6467 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933719.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 7 (LOC440345), mRNA Length = 5689 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933717.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 6 (LOC440345), mRNA Length = 4852 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933716.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 5 (LOC440345), mRNA Length = 5457 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933709.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 4 (LOC440345), mRNA Length = 8442 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>ref|XM_933707.1| PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 3 (LOC440345), mRNA Length = 2179 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 852 gatcagctacccaaaatggctccaaa 827
>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence Length = 200594 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 36793 gatcagctacccaaaatggctccaaa 36818
>ref|XM_933983.1| PREDICTED: Homo sapiens hypothetical protein LOC646866 (LOC646866), mRNA Length = 3325 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1315 gatcagctacccaaaatggctccaaa 1290
>ref|NG_005304.1| Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4/GIY-YIG domain containing 2 region (SULT1A4/GIYD2@) on chromosome 16 Length = 124025 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 110444 gatcagctacccaaaatggctccaaa 110469
>emb|BX001032.12| Zebrafish DNA sequence from clone CH211-14K18 in linkage group 12, complete sequence Length = 162109 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacatacata 191 |||||||||||||||||||||| Sbjct: 153525 cacatacacaagcacatacata 153546
>gb|AC009086.6| Homo sapiens chromosome 16 clone RP11-368N21, complete sequence Length = 201155 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 63269 gatcagctacccaaaatggctccaaa 63294
>emb|AL773508.6| Mouse DNA sequence from clone RP23-253D15 on chromosome 2, complete sequence Length = 132091 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 171 acatacacaagcacatacatac 192 |||||||||||||||||||||| Sbjct: 21429 acatacacaagcacatacatac 21408
>ref|NR_002473.2| Homo sapiens PI-3-kinase-related kinase SMG-1 pseudogene (LOC440354) on chromosome 16 Length = 3874 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 938 gatcagctacccaaaatggctccaaa 913
>ref|NR_002453.4| Homo sapiens PI-3-kinase-related kinase SMG-1 pseudogene (LOC595101) on chromosome 16 Length = 4301 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1368 gatcagctacccaaaatggctccaaa 1343
>gb|AC106788.3| Homo sapiens chromosome 16 clone RP11-368J21, complete sequence Length = 170613 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 122638 gatcagctacccaaaatggctccaaa 122663
>gb|AC092119.3| Homo sapiens chromosome 16 clone CTD-2649C14, complete sequence Length = 172206 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 36040 gatcagctacccaaaatggctccaaa 36065
>gb|AC092375.4| Homo sapiens chromosome 16 clone RP11-645C24, complete sequence Length = 173275 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 129791 gatcagctacccaaaatggctccaaa 129816
>gb|AC092287.4| Homo sapiens chromosome 16 clone CTD-2288F12, complete sequence Length = 116478 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 47738 gatcagctacccaaaatggctccaaa 47763
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 146855 gatcagctacccaaaatggctccaaa 146880
>gb|AC074315.79| Mus musculus strain C57BL/6J clone rp23-445c23 map 15, complete sequence Length = 177864 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 catacacaagcacatacatacc 193 |||||||||||||||||||||| Sbjct: 151722 catacacaagcacatacatacc 151701
>dbj|AB055227.1| Homo sapiens MMAA mRNA for hLAT1-3TM, complete cds Length = 2774 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1426 gatcagctacccaaaatggctccaaa 1401
>dbj|AB055226.1| Homo sapiens MLAS mRNA for hLAT1-3TM, complete cds Length = 2974 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1643 gatcagctacccaaaatggctccaaa 1618
>dbj|AB055225.1| Homo sapiens IMAA mRNA for hLAT1-3TM, complete cds Length = 2808 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1465 gatcagctacccaaaatggctccaaa 1440
>gb|AC123677.6| Mus musculus chromosome 15, clone RP23-275M16, complete sequence Length = 149858 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 catacacaagcacatacatacc 193 |||||||||||||||||||||| Sbjct: 90915 catacacaagcacatacatacc 90936
>dbj|AB061371.1| Homo sapiens smg-1 mRNA for phosphatidylinositol 3-kinase-related protein kinase, complete cds Length = 13110 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1375 gatcagctacccaaaatggctccaaa 1350
>dbj|AB040413.1| Homo sapiens IMAA mRNA for hLAT1-3TM, complete cds Length = 2114 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 gatcagctacccaaaatggcaccaaa 224 |||||||||||||||||||| ||||| Sbjct: 1468 gatcagctacccaaaatggctccaaa 1443
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tcacatacacaagcacataca 189 ||||||||||||||||||||| Sbjct: 51330 tcacatacacaagcacataca 51350
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 acatacacaagcacatacata 191 ||||||||||||||||||||| Sbjct: 66798 acatacacaagcacatacata 66818
>gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosome 14, complete sequence Length = 178534 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacatacat 190 ||||||||||||||||||||| Sbjct: 130889 cacatacacaagcacatacat 130909
>gb|AC116713.8| Mus musculus chromosome 9, clone RP23-118M23, complete sequence Length = 275731 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 acatacacaagcacatacata 191 ||||||||||||||||||||| Sbjct: 256307 acatacacaagcacatacata 256287
>emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chromosome 1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and a novel gene, complete sequence Length = 180569 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 acatacacaagcacatacata 191 ||||||||||||||||||||| Sbjct: 171186 acatacacaagcacatacata 171166
>emb|BX914211.5| Zebrafish DNA sequence from clone DKEY-91D10 in linkage group 3, complete sequence Length = 179226 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cacatacacaagcacatacataccc 194 |||| |||||||||||||||||||| Sbjct: 48602 cacacacacaagcacatacataccc 48578
>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete sequence Length = 216540 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 168 ttcacatacacaagcacatacatac 192 |||||| |||||||||||||||||| Sbjct: 147716 ttcacacacacaagcacatacatac 147740
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 gcaagaagaagatggtgctag 317 ||||||||||||||||||||| Sbjct: 617753 gcaagaagaagatggtgctag 617773
>gb|AC110183.10| Mus musculus chromosome 3, clone RP24-406M9, complete sequence Length = 171452 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 283 agaatatgtattatgcaagaagaagatggtgct 315 ||||||| ||||||||||||||| |||||||| Sbjct: 31439 agaatatcaattatgcaagaagaaaatggtgct 31407
>gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome 14, complete sequence Length = 192706 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacatacat 190 ||||||||||||||||||||| Sbjct: 126860 cacatacacaagcacatacat 126840
>gb|AC111065.20| Mus musculus chromosome 19, clone RP23-315E4, complete sequence Length = 193977 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacatacat 190 ||||||||||||||||||||| Sbjct: 34416 cacatacacaagcacatacat 34436
>dbj|AP002841.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-239P2, complete sequence Length = 176485 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 tcacatacacaagcacataca 189 ||||||||||||||||||||| Sbjct: 132887 tcacatacacaagcacataca 132907
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 attcacatacacaagcacatacata 191 ||||||||||||| ||||||||||| Sbjct: 24414 attcacatacacacgcacatacata 24438
>emb|BX005142.4| Zebrafish DNA sequence from clone CH211-129K16 in linkage group 3, complete sequence Length = 170200 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 142 acacacccaggctacagtctccccaattc 170 |||||||||||||||| || ||||||||| Sbjct: 105115 acacacccaggctacaatcgccccaattc 105087
>gb|AC162521.4| Mus musculus chromosome 7, clone RP23-356O13, complete sequence Length = 207307 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 acatacacaagcacatacata 191 ||||||||||||||||||||| Sbjct: 6700 acatacacaagcacatacata 6680
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 acatacacaagcacatacata 191 ||||||||||||||||||||| Sbjct: 120219 acatacacaagcacatacata 120239
>emb|AL732296.11| Mouse DNA sequence from clone RP23-131P6 on chromosome 2, complete sequence Length = 203503 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 catacacaagcacatacatac 192 ||||||||||||||||||||| Sbjct: 153336 catacacaagcacatacatac 153316
>ref|XM_468590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 88 ggccgaagcccatgaggtcg 69
>gb|AC169122.1| Mus musculus BAC clone RP23-167K9 from chromosome 17, complete sequence Length = 127115 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 104616 cacatacacaagcacataca 104635
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 atcggcagctcggggcgcag 263 |||||||||||||||||||| Sbjct: 2259831 atcggcagctcggggcgcag 2259850
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 acatacacaagcacatacat 190 |||||||||||||||||||| Sbjct: 35295 acatacacaagcacatacat 35314
>gb|AC159092.11| Mus musculus chromosome 1, clone RP23-103C13, complete sequence Length = 196891 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tatacagaaagttgagccag 50 |||||||||||||||||||| Sbjct: 75354 tatacagaaagttgagccag 75335
>gb|AC138320.12| Mus musculus chromosome 5, clone RP23-181I1, complete sequence Length = 230584 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 cacatacacaagcacatacatacccctc 197 |||| ||||| ||||||||||||||||| Sbjct: 164317 cacacacacatgcacatacatacccctc 164344
>ref|XM_367077.1| Magnaporthe grisea 70-15 hypothetical protein (MG10707.4) partial mRNA Length = 1785 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 gccgaagcccatgaggtcga 444 |||||||||||||||||||| Sbjct: 285 gccgaagcccatgaggtcga 266
>gb|AC111058.10| Mus musculus chromosome 7, clone RP24-562C11, complete sequence Length = 211691 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 135871 cacatacacaagcacataca 135890
>gb|AC122508.3| Mus musculus BAC clone RP24-427G15 from chromosome 12, complete sequence Length = 169567 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gtattatgcaagaagaagat 309 |||||||||||||||||||| Sbjct: 90471 gtattatgcaagaagaagat 90452
>ref|NM_204941.1| Gallus gallus chromodomain helicase DNA binding protein 1 (CHD1), mRNA Length = 6872 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 caagaagaagatggtgctag 317 |||||||||||||||||||| Sbjct: 2996 caagaagaagatggtgctag 3015
>gb|AC186369.1| Pan troglodytes chromosome UNKNOWN clone CH251-21L17, complete sequence Length = 204239 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 80339 cggtgggctgctgctcctcgtcct 80362
>gb|BC017380.2| Homo sapiens zinc finger protein 259, mRNA (cDNA clone MGC:1943 IMAGE:2988688), complete cds Length = 1781 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 152 cggtgggctgctgctcctcgtcct 129
>gb|BC017349.2| Homo sapiens zinc finger protein 259, mRNA (cDNA clone MGC:29702 IMAGE:5013820), complete cds Length = 1810 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 169 cggtgggctgctgctcctcgtcct 146
>gb|BC004256.1| Homo sapiens zinc finger protein 259, mRNA (cDNA clone MGC:10654 IMAGE:3610932), complete cds Length = 1818 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 139 cggtgggctgctgctcctcgtcct 116
>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence Length = 235930 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 129742 cacatacacaagcacataca 129723
>ref|NM_003904.3| Homo sapiens zinc finger protein 259 (ZNF259), mRNA Length = 1810 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 169 cggtgggctgctgctcctcgtcct 146
>gb|AC163746.5| Mus musculus BAC clone RP23-394B5 from chromosome 17, complete sequence Length = 199852 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 attcacatacacaagcacat 186 |||||||||||||||||||| Sbjct: 29411 attcacatacacaagcacat 29430
>gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete sequence Length = 185995 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 29826 cacatacacaagcacataca 29845
>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence Length = 195146 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tatacagaaagttgagccag 50 |||||||||||||||||||| Sbjct: 113984 tatacagaaagttgagccag 113965
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 1323385 ggccgaagcccatgaggtcg 1323366
>gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome 17, complete sequence Length = 220643 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 attcacatacacaagcacat 186 |||||||||||||||||||| Sbjct: 153793 attcacatacacaagcacat 153812
>gb|AC146618.2| Mus musculus BAC clone RP23-5P3 from chromosome 10, complete sequence Length = 197233 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 66299 cacatacacaagcacataca 66280
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 cggagcgctcgcggccgaagccca 435 |||||||||||||| ||||||||| Sbjct: 98348 cggagcgctcgcggacgaagccca 98325
>gb|AC098733.2| Mus musculus BAC clone RP23-103C10 from 19, complete sequence Length = 214382 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 161052 cacatacacaagcacataca 161071
>gb|AC098885.3| Mus musculus BAC clone RP23-122L17 from 5, complete sequence Length = 211112 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 acatacacaagcacatacat 190 |||||||||||||||||||| Sbjct: 170925 acatacacaagcacatacat 170944
>ref|XM_845219.1| PREDICTED: Canis familiaris similar to zinc finger protein 259, transcript variant 2 (LOC479428), mRNA Length = 1383 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>gb|AC158113.7| Mus musculus chromosome 7, clone RP23-227N6, complete sequence Length = 159400 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 117659 cacatacacaagcacataca 117640
>gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, complete sequence Length = 143815 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atacacaagcacatacatac 192 |||||||||||||||||||| Sbjct: 35157 atacacaagcacatacatac 35138
>gb|BC012162.1| Homo sapiens zinc finger protein 259, mRNA (cDNA clone MGC:20397 IMAGE:4578136), complete cds Length = 1781 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 152 cggtgggctgctgctcctcgtcct 129
>emb|AL354997.17| Human DNA sequence from clone RP11-309H8 on chromosome 13 Contains two novel genes and a novel RING finger protein pseudogene, complete sequence Length = 156077 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atacacaagcacatacatac 192 |||||||||||||||||||| Sbjct: 112700 atacacaagcacatacatac 112681
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 1372120 cacatacacaagcacataca 1372101
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ttcacatacacaagcacata 187 |||||||||||||||||||| Sbjct: 332785 ttcacatacacaagcacata 332766
>gb|BT008159.1| Synthetic construct Homo sapiens zinc finger protein 259 mRNA, partial cds Length = 1380 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>gb|BT006642.1| Homo sapiens zinc finger protein 259 mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 43449 cacatacacaagcacataca 43430
>emb|AL837512.2| Mouse DNA sequence from clone RP23-125J3 on chromosome 13 Contains a novel gene, complete sequence Length = 99030 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 94094 cacatacacaagcacataca 94075
>emb|CR626297.1| full-length cDNA clone CS0DB008YI10 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1742 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 148 cggtgggctgctgctcctcgtcct 125
>emb|CR622469.1| full-length cDNA clone CS0DD001YM24 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1643 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 135 cggtgggctgctgctcctcgtcct 112
>emb|CR621542.1| full-length cDNA clone CS0DF006YL17 of Fetal brain of Homo sapiens (human) Length = 1507 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 125 cggtgggctgctgctcctcgtcct 102
>emb|CR594434.1| full-length cDNA clone CS0DI017YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1715 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>emb|CR590018.1| full-length cDNA clone CS0DL010YG08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1739 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 163 cggtgggctgctgctcctcgtcct 140
>gb|AC026396.8| Homo sapiens chromosome 10 clone RP11-89K18, complete sequence Length = 162057 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcacatacacaagcacatacatac 192 ||||| |||||||||||||||||| Sbjct: 79436 tcacacacacaagcacatacatac 79413 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcacatacacaagcacatacatac 192 ||||| |||||||||||||||||| Sbjct: 79173 tcacacacacaagcacatacatac 79150
>gb|AC160055.2| Pan troglodytes BAC clone CH251-555N15 from chromosome unknown, complete sequence Length = 227737 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 200558 cggtgggctgctgctcctcgtcct 200535
>dbj|AK157798.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130047E23 product:Phosphatidylinositol 3-kinase-related protein kinase homolog (Fragment) homolog [Mus musculus], full insert sequence Length = 3830 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1386 tcagctacccaaaatggctccaaa 1363
>emb|BX470189.5| Zebrafish DNA sequence from clone DKEY-195M1 in linkage group 5, complete sequence Length = 183070 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 tcacatacacaagcacatac 188 |||||||||||||||||||| Sbjct: 92133 tcacatacacaagcacatac 92114
>gb|AC151832.3| Mus musculus BAC clone RP24-68M1 from chromosome 10, complete sequence Length = 222815 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 161197 cacatacacaagcacataca 161178
>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete sequence Length = 154626 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 cacatacacaagcacatacatacc 193 |||||||||| ||||||||||||| Sbjct: 55553 cacatacacatgcacatacatacc 55530
>gb|AC161881.3| Mus musculus BAC clone RP23-200C1 from chromosome 13, complete sequence Length = 176749 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 139803 cacatacacaagcacataca 139784
>dbj|AK084611.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330021H01 product:unclassifiable, full insert sequence Length = 4136 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 3026 cacatacacaagcacataca 3007
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 gaggccggagcgctcgcggccgaa 430 ||||||| |||||||||||||||| Sbjct: 4266337 gaggccgtagcgctcgcggccgaa 4266360
>gb|AC074203.3| Homo sapiens chromosome 22 clone cos4 map 22q11, complete sequence Length = 42479 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 36591 cggtgggctgctgctcctcgtcct 36568
>dbj|AK049391.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430003H13 product:weakly similar to HYPOTHETICAL 64.6 KDA PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 3630 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1399 tcagctacccaaaatggctccaaa 1376
>gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map 11q23, complete sequence Length = 188963 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 73510 cggtgggctgctgctcctcgtcct 73533
>dbj|AK047829.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130002K18 product:PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE homolog [Homo sapiens], full insert sequence Length = 2475 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1380 tcagctacccaaaatggctccaaa 1357
>dbj|AK041264.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530095I04 product:similar to PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE [Homo sapiens], full insert sequence Length = 3911 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1178 tcagctacccaaaatggctccaaa 1155
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 1323383 ggccgaagcccatgaggtcg 1323364
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 attatgcaagaagaagatggtgct 315 |||||||||||||||||| ||||| Sbjct: 131383 attatgcaagaagaagattgtgct 131406
>gb|AC021021.9| Homo sapiens BAC clone RP11-557N1 from 2, complete sequence Length = 169202 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 77100 cacatacacaagcacataca 77119
>gb|AC102373.13| Mus musculus chromosome 3, clone RP23-263O17, complete sequence Length = 198848 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 189214 cacatacacaagcacataca 189233
>gb|AC007388.4| Homo sapiens BAC clone RP11-395B14 from 2, complete sequence Length = 152155 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 96748 cacatacacaagcacataca 96767
>ref|XM_574545.1| PREDICTED: Rattus norvegicus similar to PI-3-kinase-related kinase SMG-1 isoform 1 (LOC499252), mRNA Length = 3833 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1399 tcagctacccaaaatggctccaaa 1376
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 128287 ggccgaagcccatgaggtcg 128268
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 gaggccggagcgctcgcggccgaa 430 ||||||| |||||||||||||||| Sbjct: 32580 gaggccgaagcgctcgcggccgaa 32557
>gb|AY892676.1| Synthetic construct Homo sapiens clone FLH026820.01L zinc finger protein 259 (ZNF259) mRNA, partial cds Length = 1380 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>emb|BX649456.5| Mouse DNA sequence from clone RP24-481E15 on chromosome 4, complete sequence Length = 61622 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 atacacaagcacatacatac 192 |||||||||||||||||||| Sbjct: 16192 atacacaagcacatacatac 16173
>emb|BX649564.3| Mouse DNA sequence from clone RP23-405A18 on chromosome 2, complete sequence Length = 38414 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cacaagcacatacatacccc 195 |||||||||||||||||||| Sbjct: 34018 cacaagcacatacatacccc 34037
>gb|AY890188.1| Synthetic construct Homo sapiens clone FLH026824.01X zinc finger protein 259 (ZNF259) mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>gb|AY890187.1| Synthetic construct Homo sapiens clone FLH026823.01X zinc finger protein 259 (ZNF259) mRNA, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 136 cggtgggctgctgctcctcgtcct 113
>dbj|AK120888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D13, full insert sequence Length = 1352 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 781 ggccgaagcccatgaggtcg 762
>gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complete sequence Length = 221264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 156625 cacatacacaagcacataca 156644
>gb|AF019767.1|AF019767 Homo sapiens zinc finger protein (ZPR1) mRNA, complete cds Length = 1817 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 164 cggtgggctgctgctcctcgtcct 141
>dbj|AK060316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E04, full insert sequence Length = 1361 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 715 ggccgaagcccatgaggtcg 696
>dbj|AP006216.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-87O6, complete sequence Length = 177334 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 76903 cggtgggctgctgctcctcgtcct 76926
>dbj|D14316.1| Gallus gallus mRNA for delta-crystallin enhancer binding protein, complete cds Length = 2292 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 caagaagaagatggtgctag 317 |||||||||||||||||||| Sbjct: 778 caagaagaagatggtgctag 797
>gb|AF004397.1|AF004397 Gallus gallus chromo-helicase-DNA-binding on the Z chromosome protein, variant with hydrophilic domain, (CHD-Z) mRNA, complete cds Length = 6872 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 caagaagaagatggtgctag 317 |||||||||||||||||||| Sbjct: 2996 caagaagaagatggtgctag 3015
>gb|BC111028.1| Homo sapiens zinc finger protein 259, mRNA (cDNA clone MGC:110983 IMAGE:5245870), complete cds Length = 1895 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 156 cggtgggctgctgctcctcgtcct 133
>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence Length = 157682 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 acatacacaagcacatacat 190 |||||||||||||||||||| Sbjct: 139532 acatacacaagcacatacat 139513
>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence Length = 188348 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tatacagaaagttgagccag 50 |||||||||||||||||||| Sbjct: 163626 tatacagaaagttgagccag 163607
>gb|AC136020.5| Mus musculus BAC clone RP24-434I13 from 12, complete sequence Length = 193375 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 73932 cacatacacaagcacataca 73951
>gb|BC011929.2| Homo sapiens cDNA clone IMAGE:4545123, containing frame-shift errors Length = 1793 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 cggtgggctgctgctcgtcgtcct 360 |||||||||||||||| ||||||| Sbjct: 148 cggtgggctgctgctcctcgtcct 125
>ref|NM_001031814.1| Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA Length = 15553 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 1399 tcagctacccaaaatggctccaaa 1376
>gb|AC132432.4| Mus musculus BAC clone RP23-213H1 from 7, complete sequence Length = 198307 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tcagctacccaaaatggcaccaaa 224 |||||||||||||||||| ||||| Sbjct: 113017 tcagctacccaaaatggctccaaa 113040
>emb|AL805919.10| Mouse DNA sequence from clone RP23-395M3 on chromosome 4, complete sequence Length = 199130 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 102377 cacatacacaagcacataca 102396
>dbj|AB007629.1| Oryza sativa (japonica cultivar-group) HOS66 mRNA, partial cds Length = 1161 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 599 ggccgaagcccatgaggtcg 580
>gb|AC169676.2| Mus musculus BAC clone RP24-163P20 from chromosome 17, complete sequence Length = 150204 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 77887 cacatacacaagcacataca 77906
>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete sequence Length = 181805 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 140184 cacatacacaagcacataca 140203
>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete sequence Length = 203030 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 162267 cacatacacaagcacataca 162248
>emb|AL844551.3| Mouse DNA sequence from clone RP23-117M21 on chromosome 2, complete sequence Length = 172378 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cacatacacaagcacatacatacc 193 |||| ||||||||||||||||||| Sbjct: 82463 cacacacacaagcacatacatacc 82486
>emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chromosome 2, complete sequence Length = 187340 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 121800 cacatacacaagcacataca 121819
>emb|AL732530.6| Mouse DNA sequence from clone RP23-102I12 on chromosome 4, complete sequence Length = 211998 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacatacacaagcacataca 189 |||||||||||||||||||| Sbjct: 123062 cacatacacaagcacataca 123043
>gb|AC117789.17| Mus musculus chromosome 1, clone RP24-548D18, complete sequence Length = 180733 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 acatacacaagcacatacataccc 194 |||||||||||||||| ||||||| Sbjct: 81249 acatacacaagcacatgcataccc 81226
>dbj|AB061819.1| Oryza sativa (japonica cultivar-group) HOS66 mRNA for KNOX family class 2 homeodomain protein, complete cds Length = 1493 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ggccgaagcccatgaggtcg 443 |||||||||||||||||||| Sbjct: 795 ggccgaagcccatgaggtcg 776 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,558,755 Number of Sequences: 3902068 Number of extensions: 3558755 Number of successful extensions: 72123 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71540 Number of HSP's gapped (non-prelim): 583 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)