ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart16c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT016527.1| Zea mays clone Contig360 mRNA sequence 212 7e-52
2gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds 212 7e-52
3gb|AY105373.1| Zea mays PCO148993 mRNA sequence 212 7e-52
4ref|XM_473864.1| Oryza sativa (japonica cultivar-group), predic... 194 2e-46
5dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
6dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
7dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
8dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRN... 194 2e-46
9emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 101 2e-18
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
11gb|BT014249.1| Lycopersicon esculentum clone 133451F, mRNA sequence 76 1e-10
12ref|NM_129037.3| Arabidopsis thaliana protein transporter AT2G34... 72 2e-09
13gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, comp... 72 2e-09
14gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, comp... 72 2e-09
15ref|NM_102800.2| Arabidopsis thaliana protein transporter AT1G30... 62 2e-06
16gb|AF348588.1| Arabidopsis thaliana putative coatomer protein, e... 62 2e-06
17gb|AY063113.1| Arabidopsis thaliana putative coatomer protein, e... 62 2e-06
18gb|AF370325.1| Arabidopsis thaliana putative coatomer protein, e... 62 2e-06
19emb|BX814680.1|CNS0AEHW Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
20emb|BX814617.1|CNS0ADQB Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
21emb|BX841764.1|CNS09Y7R Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
22gb|AY087474.1| Arabidopsis thaliana clone 35814 mRNA, complete s... 62 2e-06
23dbj|AB042114.1| Glycine max cope2 mRNA for epsilon2-COP, partial... 56 1e-04
24gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 se... 52 0.002
25gb|AE010372.1| Methanopyrus kandleri AV19 section 71 of 157 of t... 46 0.097
26gb|AC113266.24| Papio anubis clone rp41-106a4, complete sequence 46 0.097
27gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map... 46 0.097
28gb|AC150687.3| Bos taurus BAC CH240-243M2 (Children's Hospital ... 44 0.38
29ref|XM_802105.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
30ref|XM_807142.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
31ref|XM_502196.1| Yarrowia lipolytica CLIB122, YALI0C23793g predi... 42 1.5
32emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.5
33ref|XM_635520.1| Dictyostelium discoideum hypothetical protein (... 40 6.0
34ref|NM_015094.1| Homo sapiens hypermethylated in cancer 2 (HIC2)... 40 6.0
35gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chrom... 40 6.0
36emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 i... 40 6.0
37gb|BC009207.2| Homo sapiens hypermethylated in cancer 2, mRNA (c... 40 6.0
38gb|AC183832.3| Pan troglodytes BAC clone CH251-260G12 from chrom... 40 6.0
39gb|AC182640.3| Pan troglodytes BAC clone CH251-352K16 from chrom... 40 6.0
40gb|BC094787.1| Homo sapiens hypermethylated in cancer 2, mRNA (c... 40 6.0
41dbj|AB028943.2| Homo sapiens mRNA for KIAA1020 protein, partial cds 40 6.0
42emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in... 40 6.0
43gb|AC122731.16| Pan troglodytes clone rp43-14d7, complete sequence 40 6.0
44dbj|AK023021.1| Homo sapiens cDNA FLJ12959 fis, clone NT2RP20056... 40 6.0
45gb|AC091799.5| Homo sapiens BAC clone RP11-416N13 from 7, comple... 40 6.0
46gb|AC172375.3| Pan troglodytes BAC clone CH251-541M22 from chrom... 40 6.0
47gb|AC007957.37| Homo sapiens chromosome 22 clone b445 map 22q11,... 40 6.0
48gb|AC131180.3| Homo sapiens BAC clone RP11-316I2 from 2, complet... 40 6.0
49gb|AC013269.10| Homo sapiens BAC clone RP11-356I10 from 2, compl... 40 6.0
50gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, comple... 40 6.0
51gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, comple... 40 6.0
52gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, compl... 40 6.0
53gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complet... 40 6.0
54emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in... 40 6.0
55emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in... 40 6.0
56dbj|AP000557.2| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 6.0
57dbj|AP000556.2| Homo sapiens genomic DNA, chromosome 22q11.2, BC... 40 6.0 
>gb|BT016527.1| Zea mays clone Contig360 mRNA sequence
          Length = 1201

 Score =  212 bits (107), Expect = 7e-52
 Identities = 170/191 (89%)
 Strand = Plus / Minus

                                                                       
Query: 254 tcttaactagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacg 313
           ||||||||||||| || ||||| ||||| |||||||||||||||| |||||| || || |
Sbjct: 924 tcttaactagcacatggtcaggatgcgatagcttcagctggctgaggtatcgtgatgatg 865

                                                                       
Query: 314 gtttgccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgt 373
           ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 864 gtttgcctaagtggagattacatacaattagattcgcaagagtttcaggatcttttgcgt 805

                                                                       
Query: 374 ccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatac 433
           ||||||| |  ||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 804 ccttgttcaacgcttcaagcaacagagtctcagcctcctcaaagcttcccatgtgcatac 745

                      
Query: 434 agcaaactgcc 444
           |||| ||||||
Sbjct: 744 agcagactgcc 734
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>gb|AF216853.1|AF216853 Zea mays epsilon-COP mRNA, complete cds
          Length = 1180

 Score =  212 bits (107), Expect = 7e-52
 Identities = 170/191 (89%)
 Strand = Plus / Minus

                                                                       
Query: 254 tcttaactagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacg 313
           ||||||||||||| || ||||| ||||| |||||||||||||||| |||||| || || |
Sbjct: 914 tcttaactagcacatggtcaggatgcgatagcttcagctggctgaggtatcgtgatgatg 855

                                                                       
Query: 314 gtttgccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgt 373
           ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 854 gtttgcctaagtggagattacatacaattagattcgcaagagtttcaggatcttttgcgt 795

                                                                       
Query: 374 ccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatac 433
           ||||||| |  ||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 794 ccttgttcaacgcttcaagcaacagagtctcagcctcctcaaagcttcccatgtgcatac 735

                      
Query: 434 agcaaactgcc 444
           |||| ||||||
Sbjct: 734 agcagactgcc 724
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>gb|AY105373.1| Zea mays PCO148993 mRNA sequence
          Length = 1262

 Score =  212 bits (107), Expect = 7e-52
 Identities = 170/191 (89%)
 Strand = Plus / Minus

                                                                       
Query: 254 tcttaactagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacg 313
           ||||||||||||| || ||||| ||||| |||||||||||||||| |||||| || || |
Sbjct: 914 tcttaactagcacatggtcaggatgcgatagcttcagctggctgaggtatcgtgatgatg 855

                                                                       
Query: 314 gtttgccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgt 373
           ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 854 gtttgcctaagtggagattacatacaattagattcgcaagagtttcaggatcttttgcgt 795

                                                                       
Query: 374 ccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatac 433
           ||||||| |  ||||||||||| ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 794 ccttgttcaacgcttcaagcaacagagtctcagcctcctcaaagcttcccatgtgcatac 735

                      
Query: 434 agcaaactgcc 444
           |||| ||||||
Sbjct: 734 agcagactgcc 724
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>ref|XM_473864.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 864

 Score =  194 bits (98), Expect = 2e-46
 Identities = 164/186 (88%)
 Strand = Plus / Minus

                                                                       
Query: 259 actagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacggtttg 318
           |||||||| ||||| ||||| || || ||||||||||||| |||||  || |||||||||
Sbjct: 806 actagcacatgatcggggtgtgatagtttcagctggctgaggtatcttgatgacggtttg 747

                                                                       
Query: 319 ccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgtccttg 378
           ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 746 ccaaggtggagattacacacaataagattagcaagagtttcaggatcttttgcatccttg 687

                                                                       
Query: 379 tttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatacagcaa 438
           || |  ||||| || || ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 686 ttcaatgcttcgagtaaaagagtctcagcctcatcaaagctccccatgtgcatacagcaa 627

                 
Query: 439 actgcc 444
           ||||||
Sbjct: 626 actgcc 621
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>dbj|AK104427.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A04, full
           insert sequence
          Length = 1207

 Score =  194 bits (98), Expect = 2e-46
 Identities = 164/186 (88%)
 Strand = Plus / Minus

                                                                       
Query: 259 actagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacggtttg 318
           |||||||| ||||| ||||| || || ||||||||||||| |||||  || |||||||||
Sbjct: 938 actagcacatgatcggggtgtgatagtttcagctggctgaggtatcttgatgacggtttg 879

                                                                       
Query: 319 ccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgtccttg 378
           ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 878 ccaaggtggagattacacacaataagattagcaagagtttcaggatcttttgcatccttg 819

                                                                       
Query: 379 tttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatacagcaa 438
           || |  ||||| || || ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 818 ttcaatgcttcgagtaaaagagtctcagcctcatcaaagctccccatgtgcatacagcaa 759

                 
Query: 439 actgcc 444
           ||||||
Sbjct: 758 actgcc 753
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>dbj|AK099008.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120E14, full
           insert sequence
          Length = 1218

 Score =  194 bits (98), Expect = 2e-46
 Identities = 164/186 (88%)
 Strand = Plus / Minus

                                                                       
Query: 259 actagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacggtttg 318
           |||||||| ||||| ||||| || || ||||||||||||| |||||  || |||||||||
Sbjct: 911 actagcacatgatcggggtgtgatagtttcagctggctgaggtatcttgatgacggtttg 852

                                                                       
Query: 319 ccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgtccttg 378
           ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 851 ccaaggtggagattacacacaataagattagcaagagtttcaggatcttttgcatccttg 792

                                                                       
Query: 379 tttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatacagcaa 438
           || |  ||||| || || ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 791 ttcaatgcttcgagtaaaagagtctcagcctcatcaaagctccccatgtgcatacagcaa 732

                 
Query: 439 actgcc 444
           ||||||
Sbjct: 731 actgcc 726
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>dbj|AK060707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H03, full
           insert sequence
          Length = 1262

 Score =  194 bits (98), Expect = 2e-46
 Identities = 164/186 (88%)
 Strand = Plus / Minus

                                                                       
Query: 259 actagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacggtttg 318
           |||||||| ||||| ||||| || || ||||||||||||| |||||  || |||||||||
Sbjct: 936 actagcacatgatcggggtgtgatagtttcagctggctgaggtatcttgatgacggtttg 877

                                                                       
Query: 319 ccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgtccttg 378
           ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 876 ccaaggtggagattacacacaataagattagcaagagtttcaggatcttttgcatccttg 817

                                                                       
Query: 379 tttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatacagcaa 438
           || |  ||||| || || ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 816 ttcaatgcttcgagtaaaagagtctcagcctcatcaaagctccccatgtgcatacagcaa 757

                 
Query: 439 actgcc 444
           ||||||
Sbjct: 756 actgcc 751
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>dbj|AB042115.1| Oryza sativa (japonica cultivar-group) cope1 mRNA for epsilon1-COP,
           complete cds
          Length = 1207

 Score =  194 bits (98), Expect = 2e-46
 Identities = 164/186 (88%)
 Strand = Plus / Minus

                                                                       
Query: 259 actagcacgtgatcagggtgcgacagcttcagctggctgaagtatcgggacgacggtttg 318
           |||||||| ||||| ||||| || || ||||||||||||| |||||  || |||||||||
Sbjct: 928 actagcacatgatcggggtgtgatagtttcagctggctgaggtatcttgatgacggtttg 869

                                                                       
Query: 319 ccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcgtccttg 378
           ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 868 ccaaggtggagattacacacaataagattagcaagagtttcaggatcttttgcatccttg 809

                                                                       
Query: 379 tttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatacagcaa 438
           || |  ||||| || || ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 808 ttcaatgcttcgagtaaaagagtctcagcctcatcaaagctccccatgtgcatacagcaa 749

                 
Query: 439 actgcc 444
           ||||||
Sbjct: 748 actgcc 743
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                         
Query: 310   gacggtttgccaaggtggagattacatacaataagattggcaagagtttcaggatccttt 369
             |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 82064 gacggtttgccaaggtggagattacacacaataagattagcaagagtttcaggatctttt 82123

                    
Query: 370   gcgtcct 376
             || ||||
Sbjct: 82124 gcatcct 82130



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 397   agagtttcagcctcctcaaagctccccatatgcatacagcaaactgcc 444
             ||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 82301 agagtctcagcctcatcaaagctccccatgtgcatacagcaaactgcc 82348
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                            
Query: 310      gacggtttgccaaggtggagattacatacaataagattggcaagagtttcaggatccttt 369
                |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 31099983 gacggtttgccaaggtggagattacacacaataagattagcaagagtttcaggatctttt 31100042

                       
Query: 370      gcgtcct 376
                || ||||
Sbjct: 31100043 gcatcct 31100049



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 397      agagtttcagcctcctcaaagctccccatatgcatacagcaaactgcc 444
                ||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 31100220 agagtctcagcctcatcaaagctccccatgtgcatacagcaaactgcc 31100267
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>gb|BT014249.1| Lycopersicon esculentum clone 133451F, mRNA sequence
          Length = 1320

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Minus

                                                                       
Query: 363 atcctttgcgtccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccc 422
           |||||||| |||||||||||||||||||||||| || || ||||| || |||||  ||||
Sbjct: 800 atcctttgtgtccttgtttagggcttcaagcaacagtgtctcagcttcgtcaaaattccc 741

                             
Query: 423 catatgcatacagcaaac 440
           ||| ||||| ||||||||
Sbjct: 740 catgtgcatgcagcaaac 723
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>ref|NM_129037.3| Arabidopsis thaliana protein transporter AT2G34840 mRNA, complete
           cds
          Length = 1161

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 337 acaataagattggcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaat 396
           |||| |||||| ||||||||||| ||||| || || |||||||| || |||||||| | |
Sbjct: 837 acaacaagatttgcaagagtttctggatctttagcatccttgttgagtgcttcaagaagt 778

                                                       
Query: 397 agagtttcagcctcctcaaagctccccatatgcatacagcaaac 440
           || |||||||| || || ||| | ||||| ||||||||||||||
Sbjct: 777 agtgtttcagcttcatcgaagttacccatttgcatacagcaaac 734
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>gb|AY142051.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds
          Length = 882

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 337 acaataagattggcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaat 396
           |||| |||||| ||||||||||| ||||| || || |||||||| || |||||||| | |
Sbjct: 746 acaacaagatttgcaagagtttctggatctttagcatccttgttgagtgcttcaagaagt 687

                                                       
Query: 397 agagtttcagcctcctcaaagctccccatatgcatacagcaaac 440
           || |||||||| || || ||| | ||||| ||||||||||||||
Sbjct: 686 agtgtttcagcttcatcgaagttacccatttgcatacagcaaac 643
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>gb|AY075627.1| Arabidopsis thaliana At2g34840/F19I3.7 mRNA, complete cds
          Length = 1129

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 337 acaataagattggcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaat 396
           |||| |||||| ||||||||||| ||||| || || |||||||| || |||||||| | |
Sbjct: 805 acaacaagatttgcaagagtttctggatctttagcatccttgttgagtgcttcaagaagt 746

                                                       
Query: 397 agagtttcagcctcctcaaagctccccatatgcatacagcaaac 440
           || |||||||| || || ||| | ||||| ||||||||||||||
Sbjct: 745 agtgtttcagcttcatcgaagttacccatttgcatacagcaaac 702
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>ref|NM_102800.2| Arabidopsis thaliana protein transporter AT1G30630 mRNA, complete
           cds
          Length = 1199

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 819 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 760

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 759 tcttcaaaattacccatatgcatgcagcaaactgc 725
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>gb|AF348588.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit
           (At1g30630) mRNA, complete cds
          Length = 879

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 731 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 672

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 671 tcttcaaaattacccatatgcatgcagcaaactgc 637
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>gb|AY063113.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit
           (At1g30630) mRNA, complete cds
          Length = 910

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 731 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 672

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 671 tcttcaaaattacccatatgcatgcagcaaactgc 637
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>gb|AF370325.1| Arabidopsis thaliana putative coatomer protein, epsilon subunit
           (At1g30630) mRNA, complete cds
          Length = 1172

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 794 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 735

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 734 tcttcaaaattacccatatgcatgcagcaaactgc 700
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>emb|BX814680.1|CNS0AEHW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB89ZB12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 640

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 276 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 217

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 216 tcttcaaaattacccatatgcatgcagcaaactgc 182
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>emb|BX814617.1|CNS0ADQB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZH02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1174

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 794 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 735

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 734 tcttcaaaattacccatatgcatgcagcaaactgc 700
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>emb|BX841764.1|CNS09Y7R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB11ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1136

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 780 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 721

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 720 tcttcaaaattacccatatgcatgcagcaaactgc 686
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>gb|AY087474.1| Arabidopsis thaliana clone 35814 mRNA, complete sequence
          Length = 1189

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 349 gcaagagtttcaggatcctttgcgtccttgtttagggcttcaagcaatagagtttcagcc 408
           ||||||||||| || || || || |||||||| || |||||||| | |||||| ||||| 
Sbjct: 819 gcaagagtttctgggtctttagcatccttgttgagtgcttcaagtagtagagtctcagct 760

                                              
Query: 409 tcctcaaagctccccatatgcatacagcaaactgc 443
           || |||||  | ||||||||||| |||||||||||
Sbjct: 759 tcttcaaaattacccatatgcatgcagcaaactgc 725
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>dbj|AB042114.1| Glycine max cope2 mRNA for epsilon2-COP, partial cds
          Length = 1223

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/128 (80%)
 Strand = Plus / Minus

                                                                       
Query: 313 ggtttgccaaggtggagattacatacaataagattggcaagagtttcaggatcctttgcg 372
           |||||||| ||||| |||   |||||||  |||||||| |||||||| |||||| | || 
Sbjct: 752 ggtttgccgaggtgaagacagcatacaactagattggctagagtttctggatccctggca 693

                                                                       
Query: 373 tccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcata 432
           ||||||||||| ||||||| ||| || || || || || || ||| | ||||| ||||| 
Sbjct: 692 tccttgtttagagcttcaaccaaaagggtctcggcttcgtcgaagttgcccatgtgcatg 633

                   
Query: 433 cagcaaac 440
           ||||||||
Sbjct: 632 cagcaaac 625
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>gb|AC007060.3|T5I8 Arabidopsis thaliana chromosome 1 BAC T5I8 sequence, complete sequence
          Length = 96183

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 374   ccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatac 433
             ||||||| || |||||||| | |||||| ||||| || |||||  | ||||||||||| |
Sbjct: 34261 ccttgttgagtgcttcaagtagtagagtctcagcttcttcaaaattacccatatgcatgc 34320

                       
Query: 434   agcaaactgc 443
             ||||||||||
Sbjct: 34321 agcaaactgc 34330
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>gb|AE010372.1| Methanopyrus kandleri AV19 section 71 of 157 of the complete genome
          Length = 12580

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 230  agttatcctccgccgacgtggtg 252
            |||||||||||||||||||||||
Sbjct: 6188 agttatcctccgccgacgtggtg 6166
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>gb|AC113266.24| Papio anubis clone rp41-106a4, complete sequence
          Length = 193032

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 101    aacaatataaagcaaaaaccaatacaattca 131
              ||||||||||||||||||| ||| |||||||
Sbjct: 155467 aacaatataaagcaaaaacgaattcaattca 155437
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>gb|AC004238.3| Arabidopsis thaliana chromosome 2 clone F19I3 map ve016, complete
             sequence
          Length = 108484

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 374   ccttgtttagggcttcaagcaatagagtttcagcctcctcaaagctccccatatgcatac 433
             ||||||| || |||||||| | ||| |||||||| || || ||| | ||||| |||||||
Sbjct: 32345 ccttgttgagtgcttcaagaagtagtgtttcagcttcatcgaagttacccatttgcatac 32286

                    
Query: 434   agcaaac 440
             |||||||
Sbjct: 32285 agcaaac 32279
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>gb|AC150687.3| Bos taurus  BAC CH240-243M2 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 144223

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 101   aacaatataaagcaaaaaccaa 122
             ||||||||||||||||||||||
Sbjct: 58832 aacaatataaagcaaaaaccaa 58853
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>ref|XM_802105.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507277.10) partial mRNA
          Length = 1476

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 360 aggatcctttgcgtccttgtt 380
           |||||||||||||||||||||
Sbjct: 921 aggatcctttgcgtccttgtt 901
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>ref|XM_807142.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509895.100) partial mRNA
          Length = 1464

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 360 aggatcctttgcgtccttgtt 380
           |||||||||||||||||||||
Sbjct: 921 aggatcctttgcgtccttgtt 901
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>ref|XM_502196.1| Yarrowia lipolytica CLIB122, YALI0C23793g predicted mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 310 gacggtttgccaaggtggaga 330
           |||||||||||||||||||||
Sbjct: 458 gacggtttgccaaggtggaga 478
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 310     gacggtttgccaaggtggaga 330
               |||||||||||||||||||||
Sbjct: 3189546 gacggtttgccaaggtggaga 3189526
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>ref|XM_635520.1| Dictyostelium discoideum hypothetical protein (DDB0204640), partial
           mRNA
          Length = 2166

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 aaagcaaaaaccaatacaat 128
           ||||||||||||||||||||
Sbjct: 583 aaagcaaaaaccaatacaat 602
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>ref|NM_015094.1| Homo sapiens hypermethylated in cancer 2 (HIC2), mRNA
          Length = 6794

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  acagcttcagctggctgaag 300
            ||||||||||||||||||||
Sbjct: 3829 acagcttcagctggctgaag 3810
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>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete
             sequence
          Length = 176398

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aacaatataaagcaaaaacc 120
             ||||||||||||||||||||
Sbjct: 49378 aacaatataaagcaaaaacc 49359
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>emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 in linkage group 19,
              complete sequence
          Length = 171225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    agattacatacaataagatt 347
              ||||||||||||||||||||
Sbjct: 145138 agattacatacaataagatt 145157
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>gb|BC009207.2| Homo sapiens hypermethylated in cancer 2, mRNA (cDNA clone
           IMAGE:3629289), partial cds
          Length = 2524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 281 acagcttcagctggctgaag 300
           ||||||||||||||||||||
Sbjct: 763 acagcttcagctggctgaag 744
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>gb|AC183832.3| Pan troglodytes BAC clone CH251-260G12 from chromosome 7, complete
            sequence
          Length = 179012

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   agaacaatataaagcaaaaa 118
            ||||||||||||||||||||
Sbjct: 8888 agaacaatataaagcaaaaa 8869
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>gb|AC182640.3| Pan troglodytes BAC clone CH251-352K16 from chromosome 7, complete
              sequence
          Length = 180187

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     agaacaatataaagcaaaaa 118
              ||||||||||||||||||||
Sbjct: 175163 agaacaatataaagcaaaaa 175144
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>gb|BC094787.1| Homo sapiens hypermethylated in cancer 2, mRNA (cDNA clone MGC:104729
            IMAGE:30531041), complete cds
          Length = 4702

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  acagcttcagctggctgaag 300
            ||||||||||||||||||||
Sbjct: 3762 acagcttcagctggctgaag 3743
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>dbj|AB028943.2| Homo sapiens mRNA for KIAA1020 protein, partial cds
          Length = 6793

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  acagcttcagctggctgaag 300
            ||||||||||||||||||||
Sbjct: 3829 acagcttcagctggctgaag 3810
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>emb|BX469903.9| Zebrafish DNA sequence from clone CH211-46H12 in linkage group 23,
             complete sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   agattacatacaataagatt 347
             ||||||||||||||||||||
Sbjct: 73401 agattacatacaataagatt 73420
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>gb|AC122731.16| Pan troglodytes clone rp43-14d7, complete sequence
          Length = 166903

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   aacaatataaagcaaaaacc 120
             ||||||||||||||||||||
Sbjct: 90431 aacaatataaagcaaaaacc 90450
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>dbj|AK023021.1| Homo sapiens cDNA FLJ12959 fis, clone NT2RP2005600, highly similar to
            Homo sapiens mRNA for KIAA1020 protein
          Length = 2554

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  acagcttcagctggctgaag 300
            ||||||||||||||||||||
Sbjct: 1630 acagcttcagctggctgaag 1611
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>gb|AC091799.5| Homo sapiens BAC clone RP11-416N13 from 7, complete sequence
          Length = 48680

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    agaacaatataaagcaaaaa 118
             ||||||||||||||||||||
Sbjct: 42240 agaacaatataaagcaaaaa 42259
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>gb|AC172375.3| Pan troglodytes BAC clone CH251-541M22 from chromosome unknown, complete
              sequence
          Length = 207989

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    aaccaatacaattcactctgttaa 140
              ||||||||||||||||| ||||||
Sbjct: 193956 aaccaatacaattcactatgttaa 193933
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>gb|AC007957.37| Homo sapiens chromosome 22 clone b445 map 22q11, complete sequence
          Length = 212651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    acagcttcagctggctgaag 300
              ||||||||||||||||||||
Sbjct: 113648 acagcttcagctggctgaag 113629
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>gb|AC131180.3| Homo sapiens BAC clone RP11-316I2 from 2, complete sequence
          Length = 132753

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aacaatataaagcaaaaacc 120
             ||||||||||||||||||||
Sbjct: 31836 aacaatataaagcaaaaacc 31817
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>gb|AC013269.10| Homo sapiens BAC clone RP11-356I10 from 2, complete sequence
          Length = 165797

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aacaatataaagcaaaaacc 120
              ||||||||||||||||||||
Sbjct: 157979 aacaatataaagcaaaaacc 157960



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   aacaatataaagcaaaaacc 120
             ||||||||||||||||||||
Sbjct: 38673 aacaatataaagcaaaaacc 38692
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>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence
          Length = 195514

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aacaatataaagcaaaaacc 120
              ||||||||||||||||||||
Sbjct: 126320 aacaatataaagcaaaaacc 126301
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>gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, complete sequence
          Length = 178029

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   aacaatataaagcaaaaacc 120
             ||||||||||||||||||||
Sbjct: 78991 aacaatataaagcaaaaacc 78972
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>gb|AC140481.3| Homo sapiens BAC clone RP11-1216L17 from 2, complete sequence
          Length = 219471

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    aacaatataaagcaaaaacc 120
              ||||||||||||||||||||
Sbjct: 170611 aacaatataaagcaaaaacc 170630
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>gb|AC009404.5| Homo sapiens BAC clone RP11-28H22 from 2, complete sequence
          Length = 112883

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  aaccaatacaattcactctgttaa 140
            ||||||||||||||||| ||||||
Sbjct: 6315 aaccaatacaattcactatgttaa 6292
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>emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in linkage group 19,
              complete sequence
          Length = 169802

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    agattacatacaataagatt 347
              ||||||||||||||||||||
Sbjct: 101467 agattacatacaataagatt 101486
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>emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in linkage group 20,
             complete sequence
          Length = 90306

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   agattacatacaataagatt 347
             ||||||||||||||||||||
Sbjct: 17210 agattacatacaataagatt 17191
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>dbj|AP000557.2| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
             clone:KB1323B2
          Length = 150036

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   acagcttcagctggctgaag 300
             ||||||||||||||||||||
Sbjct: 18713 acagcttcagctggctgaag 18694
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>dbj|AP000556.2| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region,
             clone:KB1172D5
          Length = 149618

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   acagcttcagctggctgaag 300
             ||||||||||||||||||||
Sbjct: 98538 acagcttcagctggctgaag 98519


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,658,263
Number of Sequences: 3902068
Number of extensions: 3658263
Number of successful extensions: 70990
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70880
Number of HSP's gapped (non-prelim): 110
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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