ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart16c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 43 4e-04
2HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 42 0.001
3HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 40 0.003
4SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 34 0.25
5MICA1_HUMAN (Q8TDZ2) NEDD9-interacting protein with calponin hom... 32 0.94
6ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2... 31 1.6
7RPOC1_CYACA (O19897) DNA-directed RNA polymerase beta' chain (EC... 30 2.7
8RPOC1_MESVI (Q9MUS6) DNA-directed RNA polymerase beta' chain (EC... 30 2.7
9LCBA_NEIMB (Q51151) Capsular polysaccharide phosphotransferase (... 30 4.7
10RGS12_RAT (O08774) Regulator of G-protein signaling 12 (RGS12) 29 7.9
11NCD_DROME (P20480) Protein claret segregational 29 7.9
12WDR7_RAT (Q9ERH3) WD-repeat protein 7 (TGF-beta resistance-assoc... 29 7.9

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/68 (27%), Positives = 38/68 (55%)
 Frame = -2

Query: 468 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 289
           P+  V+SW    +  +DFG G+P+ F   ++ ++G    +PSR  +G + L + +   H+
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435

Query: 288 AAFEQICY 265
           + F++  Y
Sbjct: 436 SRFKKYFY 443



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = -2

Query: 468 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 289
           P+  V+SW    +  +DFG G+P+ F   ++ ++G    +PS+  +G + L + +   H+
Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436

Query: 288 AAFEQICY 265
           + F++  Y
Sbjct: 437 SLFKKYFY 444



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 18/68 (26%), Positives = 37/68 (54%)
 Frame = -2

Query: 468 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 289
           P+  V+SW    +  +DFG G P+ F   ++ ++G    +PS+  +G + L + +   H+
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435

Query: 288 AAFEQICY 265
           + F++  Y
Sbjct: 436 SLFKKHFY 443



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 456 VDSWLGFRFHQLDFGTGAPS-AFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAF 280
           + SW     +++DFG G P    V P++       FM   K   G++++ +  E+ +A F
Sbjct: 404 ISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEGIEVWASFLEDDMAKF 463

Query: 279 E 277
           E
Sbjct: 464 E 464



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>MICA1_HUMAN (Q8TDZ2) NEDD9-interacting protein with calponin homology and LIM|
           domains (Molecule interacting with CasL protein 1)
          Length = 1067

 Score = 32.0 bits (71), Expect = 0.94
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 426 QLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAFEQIC 268
           +L+     PS  VPPD P  G+ +  PS+    G     A+  EH+   E++C
Sbjct: 660 RLEMEAETPSTEVPPD-PEPGVPLTPPSQHQEAGAGDLCALCGEHLYVLERLC 711



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>ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2.3.1.153)|
           (5AT)
          Length = 469

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -2

Query: 438 FRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAFEQI 271
           F  + +DFG G P+ F    + +  L+  + SR    GV++ +++ + H+ AF +I
Sbjct: 405 FDSYGVDFGWGKPAKFDITSVDYAELIYVIQSRDFEKGVEIGVSLPKIHMDAFAKI 460



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>RPOC1_CYACA (O19897) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 633

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +1

Query: 40  C*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFGRSNNHDV 198
           C Y  N N+  +    H++S   + +  +    +  H  I V+ +G  NN D+
Sbjct: 518 CYYLTNNNLANQKGSGHYFSSFEDAIIAYKQKLISLHAFIWVKFYGTINNLDI 570



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>RPOC1_MESVI (Q9MUS6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 668

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 10/46 (21%), Positives = 26/46 (56%)
 Frame = +1

Query: 40  C*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFG 177
           C Y   +++R+  +  H++S + +++  +D   ++ H I+ V+  G
Sbjct: 555 CYYLTTEDIRLRGTKSHYFSSLEQVIMAYDQKKINLHTIVWVRFSG 600



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>LCBA_NEIMB (Q51151) Capsular polysaccharide phosphotransferase (EC 2.7.-.-)|
           (Stealth protein)
          Length = 373

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +1

Query: 4   YKDSFILLK*DIC*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFGRS 183
           Y D +   K +IC Y N ++   ++ YK        L     LH  H+ CI        S
Sbjct: 300 YLDGYATPKREICYYFNIRSSHAQTQYKKL------LFEKEHLHMPHSFCIND----SSS 349

Query: 184 NNHDVSYDMH 213
           NN D +Y +H
Sbjct: 350 NNADKNYALH 359



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>RGS12_RAT (O08774) Regulator of G-protein signaling 12 (RGS12)|
          Length = 1387

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +2

Query: 329  PLALRDGMKIM----SPSKGRSGGTKADGAPVPKSS*WNLNPSQLSTSASGQ 472
            P++  DG +++     PS+G+    K  GAPV +SS   +N S  + SA G+
Sbjct: 1090 PISSLDGQRVILEERDPSRGKVSTEKQKGAPVKQSS--AVNSSPRNHSAMGE 1139



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>NCD_DROME (P20480) Protein claret segregational|
          Length = 700

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +1

Query: 319 VDAAVGLARWHEDHEPLERQVRRHE------SGRCAGTKIELMEPESQPAVHLRVRAEHR 480
           ++    L     D+E L+RQV++H       +     TK EL E +   A+H +V+ EH 
Sbjct: 238 IETESSLKNTQSDNECLQRQVKQHTAKIETITSTLGRTKEELSELQ---AIHEKVKTEHA 294

Query: 481 A 483
           A
Sbjct: 295 A 295



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>WDR7_RAT (Q9ERH3) WD-repeat protein 7 (TGF-beta resistance-associated|
           protein TRAG)
          Length = 1488

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 200 ETSWLLLLPNNCTAIMQ-CVCTVCRSKWVTSSTI*E*KCL 84
           E + LL+ P NC+A +Q CVC+V     V   ++ E KC+
Sbjct: 514 EITQLLVPPENCSARVQHCVCSVASDHSVGLLSLREKKCI 553


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,249,160
Number of Sequences: 219361
Number of extensions: 1415851
Number of successful extensions: 3853
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3853
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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