ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart16b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full ... 603 e-169
2ref|XM_478893.1| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
5dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
6ref|XM_478892.1| Oryza sativa (japonica cultivar-group), mRNA 190 3e-45
7ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group... 190 3e-45
8gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter m... 190 3e-45
9dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
10dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 182 7e-43
11gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full... 143 6e-31
12ref|NM_189409.1| Oryza sativa (japonica cultivar-group), predic... 113 6e-22
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
14dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 1e-07
16gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 66 1e-07
17gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 66 1e-07
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
19dbj|AK073216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
20gb|AY104485.1| Zea mays PCO125163 mRNA sequence 60 7e-06
21gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 58 3e-05
22dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
23dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
24ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
25gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
26gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 geno... 52 0.002
27dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
28dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
30dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
31gb|AC148293.6| Medicago truncatula clone mth2-16c13, complete se... 48 0.028
32gb|AF542070.1| Pseudocowpox virus strain VR634 F9L-like protein ... 48 0.028
33emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chr... 44 0.44
34gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complet... 44 0.44
35emb|AJ532590.1|PMA532590 Plantago major macronuclear mRNA for po... 44 0.44
36ref|XM_511685.1| PREDICTED: Pan troglodytes zinc finger CCCH typ... 42 1.7
37gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg... 42 1.7
38gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, compl... 42 1.7
39ref|XM_964385.1| PREDICTED: Tribolium castaneum similar to CG575... 42 1.7
40ref|XM_940903.1| PREDICTED: Homo sapiens zinc finger CCCH-type c... 42 1.7
41ref|XM_036115.7| PREDICTED: Homo sapiens zinc finger CCCH-type c... 42 1.7
42gb|BC053362.1| Homo sapiens zinc finger CCCH-type containing 5, ... 42 1.7
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.7
44dbj|AB092604.1| Pectobacterium carotovorum subsp. carotovorum pr... 42 1.7
45dbj|AB051540.1| Homo sapiens mRNA for KIAA1753 protein, partial cds 42 1.7
46gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.9
47gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 6.9
48ref|XM_846704.1| PREDICTED: Canis familiaris hypothetical protei... 40 6.9
49gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.9
50gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.9
51emb|Z67734.1|CEB0198 Caenorhabditis elegans Cosmid B0198, comple... 40 6.9
52gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.9
53gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.9
54gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.9
55gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.9
56ref|XM_780487.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
57emb|X03683.1|ECCYTR E. coli cytR gene coding for Cyt repressor 40 6.9
58gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP... 40 6.9
59gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2... 40 6.9
60dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.9
61dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.9
62gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.9
63ref|NM_077613.1| Caenorhabditis elegans B0198.1 (tetraspanin) mR... 40 6.9
64gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 6.9
65gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.9
66dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
67gb|AE005031.1| Halobacterium sp. NRC-1 section 62 of 170 of the ... 40 6.9
68gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, co... 40 6.9
69gb|AF511649.1| Phytophthora sojae necrosis-inducing protein, nec... 40 6.9
70dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
71ref|XM_319528.2| Anopheles gambiae str. PEST ENSANGP00000017784 ... 40 6.9
72ref|XM_314193.2| Anopheles gambiae str. PEST ENSANGP00000014442 ... 40 6.9
73emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.9
74dbj|AK066280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
75gb|AC145979.4| Gallus gallus BAC clone CH261-10P22 from chromoso... 40 6.9
76gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.9
77dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.9
78gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.9
79emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chr... 40 6.9
80gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.9
81gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.9
82emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chr... 40 6.9 
>gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full insert mRNA sequence
          Length = 1872

 Score =  603 bits (304), Expect = e-169
 Identities = 387/414 (93%), Gaps = 3/414 (0%)
 Strand = Plus / Minus

                                                                        
Query: 100  ttcatctccactactttcaccttgtctttcgtggcggtgtctt---cttcgacgaccctg 156
            ||||||||| |||||||| ||||||||||||||||||||||||   |||||||| || ||
Sbjct: 1650 ttcatctcccctactttcgccttgtctttcgtggcggtgtcttgggcttcgacggccgtg 1591

                                                                        
Query: 157  tccttcatgccgaaaagcttcccgatctcctccagcggcaggccacgcgtctccggaatg 216
            ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1590 tccgtcatgccgaaaagcttccctatctcctcgagcggcaggccacgcgtctccggaatg 1531

                                                                        
Query: 217  aaggtgaagaagaaaatccatccgagcgccgcgatgccggcgtacaggaagaagctgccg 276
            ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 1530 aaggtgaagaagaaaatccatcctatcgccgcgatgccggcgtacaggaagaagctgccg 1471

                                                                        
Query: 277  ccgatggtgatggccttggacaaggacaggaaggacatggagaccgccgcgctggtcacg 336
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 1470 ccgatggtgatggccttggacaaggacaggaaggacatggagaccgcggcgctggtgacg 1411

                                                                        
Query: 337  cggttgcatgacgcgccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctcc 396
            ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1410 cggttgcatgacgtgcccagcgcgaagcccagcgcgcgcacccgcagtgggaagacctcc 1351

                                                                        
Query: 397  gaggtgtacacgctcgtcagggggccgaggccggtggagaagaaggacacgtaggccaag 456
            |||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 1350 gaggtgtacacgctggtgaggggcccgaggccgatggagaagaaggacacgtaggccaag 1291

                                                                  
Query: 457  acggacacaatgcacaaggcgatggcccacgggatcttggtgtccgggtgccga 510
            | |||||| ||||||| | ||||||||||||||| ||||| |||||||||||||
Sbjct: 1290 atggacacgatgcacaggccgatggcccacgggaccttggcgtccgggtgccga 1237
to top
>ref|XM_478893.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1536

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Minus

                                                                        
Query: 162  catgccgaaaagcttcccgatctcctccagcggcaggccacgcgtctccggaatgaaggt 221
            ||||||||| | ||| |||||||||||||||| | |||| ||||||||||| | |   ||
Sbjct: 1467 catgccgaacaccttgccgatctcctccagcgtctggccgcgcgtctccgggaggcgagt 1408

                                                                        
Query: 222  gaagaagaaaatccatccgagcgccgcgatgccggcgtacaggaagaagctgccgccgat 281
            ||||||||| | |||  |||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 1407 gaagaagaacacccacgcgagcgacgagatggcggcgtagaggaagaagctgccgccgat 1348

                                                                        
Query: 282  ggtgatggccttggacaaggacaggaaggacatggagaccgccgcgctggtcacgcggtt 341
            |||||||||  |||| |  |||||||||| ||||||||   |  ||||||| ||||||||
Sbjct: 1347 ggtgatggcgctggagagcgacaggaaggtcatggagatgacgccgctggtgacgcggtt 1288

                                                                        
Query: 342  gcatgacgcgccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggt 401
            ||| | | || ||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1287 gcacgccacggcgaccgcgaagcccagcgcgcgcgcccgcagcgggaagatctccgaggt 1228

                                                                 
Query: 402  gtacacgctcgtcagggggccgaggccggtggagaagaaggacacgtaggcca 454
            ||||||||  | || ||| |||||||||  |||||||||||  ||||||||||
Sbjct: 1227 gtacacgccggacatgggcccgaggccgacggagaagaaggcgacgtaggcca 1175
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Plus

                                                                            
Query: 162      catgccgaaaagcttcccgatctcctccagcggcaggccacgcgtctccggaatgaaggt 221
                ||||||||| | ||| |||||||||||||||| | |||| ||||||||||| | |   ||
Sbjct: 23531287 catgccgaacaccttgccgatctcctccagcgtctggccgcgcgtctccgggaggcgagt 23531346

                                                                            
Query: 222      gaagaagaaaatccatccgagcgccgcgatgccggcgtacaggaagaagctgccgccgat 281
                ||||||||| | |||  |||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 23531347 gaagaagaacacccacgcgagcgacgagatggcggcgtagaggaagaagctgccgccgat 23531406

                                                                            
Query: 282      ggtgatggccttggacaaggacaggaaggacatggagaccgccgcgctggtcacgcggtt 341
                |||||||||  |||| |  |||||||||| ||||||||   |  ||||||| ||||||||
Sbjct: 23531407 ggtgatggcgctggagagcgacaggaaggtcatggagatgacgccgctggtgacgcggtt 23531466

                                                                            
Query: 342      gcatgacgcgccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggt 401
                ||| | | || ||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 23531467 gcacgccacggcgaccgcgaagcccagcgcgcgcgcccgcagcgggaagatctccgaggt 23531526

                                                                     
Query: 402      gtacacgctcgtcagggggccgaggccggtggagaagaaggacacgtaggcca 454
                ||||||||  | || ||| |||||||||  |||||||||||  ||||||||||
Sbjct: 23531527 gtacacgccggacatgggcccgaggccgacggagaagaaggcgacgtaggcca 23531579



 Score =  190 bits (96), Expect = 3e-45
 Identities = 228/272 (83%)
 Strand = Plus / Minus

                                                                            
Query: 181      atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
                ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 23530308 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 23530249

                                                                            
Query: 241      agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
                ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 23530248 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 23530189

                                                                            
Query: 301      gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
                |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 23530188 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 23530129

                                                                            
Query: 361      aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
                 ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 23530128 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 23530069

                                                
Query: 421      ccgaggccggtggagaagaaggacacgtaggc 452
                || |||||| ||||||||||||  ||||||||
Sbjct: 23530068 ccaaggccgatggagaagaaggcgacgtaggc 23530037



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 263     ggaagaagctgccgccgatggtga 286
               |||||||| |||||||||||||||
Sbjct: 8501424 ggaagaagttgccgccgatggtga 8501401
to top
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1301_C12
          Length = 128396

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Plus

                                                                         
Query: 162   catgccgaaaagcttcccgatctcctccagcggcaggccacgcgtctccggaatgaaggt 221
             ||||||||| | ||| |||||||||||||||| | |||| ||||||||||| | |   ||
Sbjct: 91680 catgccgaacaccttgccgatctcctccagcgtctggccgcgcgtctccgggaggcgagt 91739

                                                                         
Query: 222   gaagaagaaaatccatccgagcgccgcgatgccggcgtacaggaagaagctgccgccgat 281
             ||||||||| | |||  |||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 91740 gaagaagaacacccacgcgagcgacgagatggcggcgtagaggaagaagctgccgccgat 91799

                                                                         
Query: 282   ggtgatggccttggacaaggacaggaaggacatggagaccgccgcgctggtcacgcggtt 341
             |||||||||  |||| |  |||||||||| ||||||||   |  ||||||| ||||||||
Sbjct: 91800 ggtgatggcgctggagagcgacaggaaggtcatggagatgacgccgctggtgacgcggtt 91859

                                                                         
Query: 342   gcatgacgcgccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggt 401
             ||| | | || ||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 91860 gcacgccacggcgaccgcgaagcccagcgcgcgcgcccgcagcgggaagatctccgaggt 91919

                                                                  
Query: 402   gtacacgctcgtcagggggccgaggccggtggagaagaaggacacgtaggcca 454
             ||||||||  | || ||| |||||||||  |||||||||||  ||||||||||
Sbjct: 91920 gtacacgccggacatgggcccgaggccgacggagaagaaggcgacgtaggcca 91972



 Score =  190 bits (96), Expect = 3e-45
 Identities = 228/272 (83%)
 Strand = Plus / Minus

                                                                         
Query: 181   atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
             ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 90701 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 90642

                                                                         
Query: 241   agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
             ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 90641 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 90582

                                                                         
Query: 301   gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
             |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 90581 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 90522

                                                                         
Query: 361   aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
              ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 90521 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 90462

                                             
Query: 421   ccgaggccggtggagaagaaggacacgtaggc 452
             || |||||| ||||||||||||  ||||||||
Sbjct: 90461 ccaaggccgatggagaagaaggcgacgtaggc 90430
to top
>dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-F04, full
            insert sequence
          Length = 1620

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Minus

                                                                        
Query: 162  catgccgaaaagcttcccgatctcctccagcggcaggccacgcgtctccggaatgaaggt 221
            ||||||||| | ||| |||||||||||||||| | |||| ||||||||||| | |   ||
Sbjct: 1455 catgccgaacaccttgccgatctcctccagcgtctggccgcgcgtctccgggaggcgagt 1396

                                                                        
Query: 222  gaagaagaaaatccatccgagcgccgcgatgccggcgtacaggaagaagctgccgccgat 281
            ||||||||| | |||  |||||| || |||| ||||||| ||||||||||||||||||||
Sbjct: 1395 gaagaagaacacccacgcgagcgacgagatggcggcgtagaggaagaagctgccgccgat 1336

                                                                        
Query: 282  ggtgatggccttggacaaggacaggaaggacatggagaccgccgcgctggtcacgcggtt 341
            |||||||||  |||| |  |||||||||| ||||||||   |  ||||||| ||||||||
Sbjct: 1335 ggtgatggcgctggagagcgacaggaaggtcatggagatgacgccgctggtgacgcggtt 1276

                                                                        
Query: 342  gcatgacgcgccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggt 401
            ||| | | || ||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1275 gcacgccacggcgaccgcgaagcccagcgcgcgcgcccgcagcgggaagatctccgaggt 1216

                                                                 
Query: 402  gtacacgctcgtcagggggccgaggccggtggagaagaaggacacgtaggcca 454
            ||||||||  | || ||| |||||||||  |||||||||||  ||||||||||
Sbjct: 1215 gtacacgccggacatgggcccgaggccgacggagaagaaggcgacgtaggcca 1163
to top
>ref|XM_478892.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1961

 Score =  190 bits (96), Expect = 3e-45
 Identities = 228/272 (83%)
 Strand = Plus / Minus

                                                                        
Query: 181  atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
            ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 1518 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 1459

                                                                        
Query: 241  agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
            ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 1458 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 1399

                                                                        
Query: 301  gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
            |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 1398 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 1339

                                                                        
Query: 361  aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
             ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 1338 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 1279

                                            
Query: 421  ccgaggccggtggagaagaaggacacgtaggc 452
            || |||||| ||||||||||||  ||||||||
Sbjct: 1278 ccaaggccgatggagaagaaggcgacgtaggc 1247
to top
>ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1301_C12.3 mRNA
          Length = 1962

 Score =  190 bits (96), Expect = 3e-45
 Identities = 228/272 (83%)
 Strand = Plus / Minus

                                                                        
Query: 181  atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
            ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 1519 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 1460

                                                                        
Query: 241  agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
            ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 1459 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 1400

                                                                        
Query: 301  gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
            |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 1399 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 1340

                                                                        
Query: 361  aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
             ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 1339 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 1280

                                            
Query: 421  ccgaggccggtggagaagaaggacacgtaggc 452
            || |||||| ||||||||||||  ||||||||
Sbjct: 1279 ccaaggccgatggagaagaaggcgacgtaggc 1248
to top
>gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter mRNA, complete cds
          Length = 1860

 Score =  190 bits (96), Expect = 3e-45
 Identities = 228/272 (83%)
 Strand = Plus / Minus

                                                                        
Query: 181  atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
            ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 1645 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 1586

                                                                        
Query: 241  agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
            ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 1585 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 1526

                                                                        
Query: 301  gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
            |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 1525 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 1466

                                                                        
Query: 361  aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
             ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 1465 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 1406

                                            
Query: 421  ccgaggccggtggagaagaaggacacgtaggc 452
            || |||||| ||||||||||||  ||||||||
Sbjct: 1405 ccaaggccgatggagaagaaggcgacgtaggc 1374
to top
>dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G08, full
            insert sequence
          Length = 1961

 Score =  182 bits (92), Expect = 7e-43
 Identities = 227/272 (83%)
 Strand = Plus / Minus

                                                                        
Query: 181  atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
            ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 1518 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 1459

                                                                        
Query: 241  agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
            ||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||||  
Sbjct: 1458 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccctggacagc 1399

                                                                        
Query: 301  gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
            |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 1398 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 1339

                                                                        
Query: 361  aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
             ||||||||||||||||| | |||||||||| ||||||| ||||||| | ||| | ||||
Sbjct: 1338 cagcccagcgcgcgcacctggagcgggaagatctccgagctgtacacccacgtgatgggg 1279

                                            
Query: 421  ccgaggccggtggagaagaaggacacgtaggc 452
            || |||||| ||||||||||||  ||||||||
Sbjct: 1278 ccaaggccgatggagaagaaggcgacgtaggc 1247
to top
>dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E03, full
            insert sequence
          Length = 1962

 Score =  182 bits (92), Expect = 7e-43
 Identities = 227/272 (83%)
 Strand = Plus / Minus

                                                                        
Query: 181  atctcctccagcggcaggccacgcgtctccggaatgaaggtgaagaagaaaatccatccg 240
            ||||||||||||| | |||| || |||||||| | | ||||| ||||||| | |||  ||
Sbjct: 1519 atctcctccagcgtccggccgcgggtctccgggaggtaggtgtagaagaacacccaggcg 1460

                                                                        
Query: 241  agcgccgcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaag 300
            ||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||  
Sbjct: 1459 agcgcggcgatgccggagtagaggaagaagctgccgccgatggtgatggccttggacagc 1400

                                                                        
Query: 301  gacaggaaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcg 360
            |||||||||| ||||||||   |  ||||||| |||||||||   |   ||||||||| |
Sbjct: 1399 gacaggaaggtcatggagatgacgccgctggtgacgcggttggcggcgacgccgagcgag 1340

                                                                        
Query: 361  aagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcaggggg 420
             ||||||||||||||||| | |||||||||| | ||||| ||||||| | ||| | ||||
Sbjct: 1339 cagcccagcgcgcgcacctggagcgggaagatccccgagctgtacacccacgtgatgggg 1280

                                            
Query: 421  ccgaggccggtggagaagaaggacacgtaggc 452
            || |||||| ||||||||||||  ||||||||
Sbjct: 1279 ccaaggccgatggagaagaaggcgacgtaggc 1248
to top
>gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full insert mRNA
            sequence
          Length = 2109

 Score =  143 bits (72), Expect = 6e-31
 Identities = 174/208 (83%)
 Strand = Plus / Minus

                                                                        
Query: 247  gcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacagg 306
            |||||||||||| | |||||||||  |||||||||||| |||||||||||||  || | |
Sbjct: 1477 gcgatgccggcgaagaggaagaaggcgccgccgatggtcatggccttggacagcgaaatg 1418

                                                                        
Query: 307  aaggacatggagaccgccgcgctggtcacgcggttgcatgacgcgccgagcgcgaagccc 366
            |||| |||||||| | |  ||||||||| |||||||   | | |||| || | | |||||
Sbjct: 1417 aaggtcatggagatcacgccgctggtcaggcggttgacggccacgcccagggagcagccc 1358

                                                                        
Query: 367  agcgcgcgcacccgcagcgggaagacctccgaggtgtacacgctcgtcagggggccgagg 426
            |||||||||||  |||||||||||| ||||||| ||||||| | ||| | ||||||||||
Sbjct: 1357 agcgcgcgcacgtgcagcgggaagatctccgagctgtacacccacgtgatggggccgagg 1298

                                        
Query: 427  ccggtggagaagaaggacacgtaggcca 454
            ||| |||||||||||| |||||||||||
Sbjct: 1297 ccgatggagaagaaggccacgtaggcca 1270
to top
>ref|NM_189409.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1536

 Score =  113 bits (57), Expect = 6e-22
 Identities = 200/245 (81%), Gaps = 2/245 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  ccacgcgtctccggaatgaaggtgaagaagaaaatccatccgagcgccgcgatgccggcg 258
            ||||| |||||||| | | ||||||||||||| | |||  | ||||  |||| |||||||
Sbjct: 1358 ccacgagtctccgggaggtaggtgaagaagaagagccaagcaagcgaggcgacgccggcg 1299

                                                                        
Query: 259  tacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatggag 318
            || ||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||
Sbjct: 1298 tagaggaagaagctgccgccgatggtgatggccttggagagggagaggaaggtcatggag 1239

                                                                        
Query: 319  accgccgcgctggtcacgcggttgcatgacg-cgccgagcgcgaagcccagcgcgcgcac 377
            |   |  ||||||| ||||||||| | | || ||||||| ||| |||| || ||||| | 
Sbjct: 1238 atgacgccgctggtgacgcggttg-aggccgacgccgagagcgcagccgagggcgcggag 1180

                                                                        
Query: 378  ccgcagcgggaagacctccgaggtgtacacgctcgtcagggggccgaggccggtggagaa 437
              | |||||||||| ||| ||| ||||||| |  || | ||||||||||||| |||||||
Sbjct: 1179 gtggagcgggaagatctcggagctgtacacccaggtgatggggccgaggccgatggagaa 1120

                 
Query: 438  gaagg 442
            |||||
Sbjct: 1119 gaagg 1115
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  113 bits (57), Expect = 6e-22
 Identities = 200/245 (81%), Gaps = 2/245 (0%)
 Strand = Plus / Plus

                                                                            
Query: 199      ccacgcgtctccggaatgaaggtgaagaagaaaatccatccgagcgccgcgatgccggcg 258
                ||||| |||||||| | | ||||||||||||| | |||  | ||||  |||| |||||||
Sbjct: 42629002 ccacgagtctccgggaggtaggtgaagaagaagagccaagcaagcgaggcgacgccggcg 42629061

                                                                            
Query: 259      tacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatggag 318
                || ||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||
Sbjct: 42629062 tagaggaagaagctgccgccgatggtgatggccttggagagggagaggaaggtcatggag 42629121

                                                                            
Query: 319      accgccgcgctggtcacgcggttgcatgacg-cgccgagcgcgaagcccagcgcgcgcac 377
                |   |  ||||||| ||||||||| | | || ||||||| ||| |||| || ||||| | 
Sbjct: 42629122 atgacgccgctggtgacgcggttg-aggccgacgccgagagcgcagccgagggcgcggag 42629180

                                                                            
Query: 378      ccgcagcgggaagacctccgaggtgtacacgctcgtcagggggccgaggccggtggagaa 437
                  | |||||||||| ||| ||| ||||||| |  || | ||||||||||||| |||||||
Sbjct: 42629181 gtggagcgggaagatctcggagctgtacacccaggtgatggggccgaggccgatggagaa 42629240

                     
Query: 438      gaagg 442
                |||||
Sbjct: 42629241 gaagg 42629245
to top
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0458E05
          Length = 193577

 Score =  113 bits (57), Expect = 6e-22
 Identities = 200/245 (81%), Gaps = 2/245 (0%)
 Strand = Plus / Plus

                                                                          
Query: 199    ccacgcgtctccggaatgaaggtgaagaagaaaatccatccgagcgccgcgatgccggcg 258
              ||||| |||||||| | | ||||||||||||| | |||  | ||||  |||| |||||||
Sbjct: 149885 ccacgagtctccgggaggtaggtgaagaagaagagccaagcaagcgaggcgacgccggcg 149944

                                                                          
Query: 259    tacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatggag 318
              || ||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||
Sbjct: 149945 tagaggaagaagctgccgccgatggtgatggccttggagagggagaggaaggtcatggag 150004

                                                                          
Query: 319    accgccgcgctggtcacgcggttgcatgacg-cgccgagcgcgaagcccagcgcgcgcac 377
              |   |  ||||||| ||||||||| | | || ||||||| ||| |||| || ||||| | 
Sbjct: 150005 atgacgccgctggtgacgcggttg-aggccgacgccgagagcgcagccgagggcgcggag 150063

                                                                          
Query: 378    ccgcagcgggaagacctccgaggtgtacacgctcgtcagggggccgaggccggtggagaa 437
                | |||||||||| ||| ||| ||||||| |  || | ||||||||||||| |||||||
Sbjct: 150064 gtggagcgggaagatctcggagctgtacacccaggtgatggggccgaggccgatggagaa 150123

                   
Query: 438    gaagg 442
              |||||
Sbjct: 150124 gaagg 150128
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                        
Query: 351     gccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacac 407
               |||||||||| | ||| ||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 5081863 gccgagcgcgcatccctgcgcgcgcagccgcagcgggaagatctccgagctgtacac 5081807



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 256     gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
               ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 5068227 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 5068168

                
Query: 316     g 316
               |
Sbjct: 5068167 g 5068167



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 250     atgccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
               ||||||||||| ||| ||||||| ||| ||| |||||||||||||
Sbjct: 5081964 atgccggcgtagaggtagaagctcccggcgaaggtgatggccttg 5081920
to top
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 351   gccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacac 407
             |||||||||| | ||| ||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 87844 gccgagcgcgcatccctgcgcgcgcagccgcagcgggaagatctccgagctgtacac 87900



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 256    gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
              ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 101480 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 101539

               
Query: 316    g 316
              |
Sbjct: 101540 g 101540



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 250   atgccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
             ||||||||||| ||| ||||||| ||| ||| |||||||||||||
Sbjct: 87743 atgccggcgtagaggtagaagctcccggcgaaggtgatggccttg 87787
to top
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                       
Query: 351    gccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacac 407
              |||||||||| | ||| ||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 174657 gccgagcgcgcatccctgcgcgcgcagccgcagcgggaagatctccgagctgtacac 174713



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 250    atgccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
              ||||||||||| ||| ||||||| ||| ||| |||||||||||||
Sbjct: 174556 atgccggcgtagaggtagaagctcccggcgaaggtgatggccttg 174600
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                        
Query: 351     gccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacac 407
               |||||||||| | ||| ||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 5081078 gccgagcgcgcatccctgcgcgcgcagccgcagcgggaagatctccgagctgtacac 5081022



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 256     gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
               ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 5067442 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 5067383

                
Query: 316     g 316
               |
Sbjct: 5067382 g 5067382



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 250     atgccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
               ||||||||||| ||| ||||||| ||| ||| |||||||||||||
Sbjct: 5081179 atgccggcgtagaggtagaagctcccggcgaaggtgatggccttg 5081135
to top
>dbj|AK073216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004D04, full
           insert sequence
          Length = 1082

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 351 gccgagcgcgaagcccagcgcgcgcacccgcagcgggaagacctccgaggtgtacac 407
           |||||||||| | ||| ||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 617 gccgagcgcgcatccctgcgcgcgcagccgcagcgggaagatctccgagctgtacac 561



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 250 atgccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
           ||||||||||| ||| ||||||| ||| ||| |||||||||||||
Sbjct: 718 atgccggcgtagaggtagaagctcccggcgaaggtgatggccttg 674
to top
>gb|AY104485.1| Zea mays PCO125163 mRNA sequence
          Length = 1304

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 247 gcgatgccggcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacagg 306
           |||||||  ||||| ||| ||||||||||| ||||||||||||| ||||| |  || |||
Sbjct: 695 gcgatgcacgcgtagaggtagaagctgccggcgatggtgatggcgttggagagcgagagg 636

                     
Query: 307 aaggacatgg 316
           ||||||||||
Sbjct: 635 aaggacatgg 626
to top
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 256    gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
              ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 132681 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 132622

               
Query: 316    g 316
              |
Sbjct: 132621 g 132621
to top
>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full
            insert sequence
          Length = 2167

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
            ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 1604 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 1545

             
Query: 316  g 316
            |
Sbjct: 1544 g 1544
to top
>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full
            insert sequence
          Length = 2300

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
            ||||||||| ||||||| ||| ||||||||||||| ||||| |  || ||||||||||||
Sbjct: 1605 gcgtacaggtagaagctcccggcgatggtgatggcgttggagagcgagaggaaggacatg 1546

             
Query: 316  g 316
            |
Sbjct: 1545 g 1545
to top
>ref|NM_196021.1| Oryza sativa (japonica cultivar-group) putative mannitol transporter
            protein (OSJNBb0076H04.3), mRNA
          Length = 1521

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 253  ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
            |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 1340 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 1299
to top
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19,
              complete sequence
          Length = 147706

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                        
Query: 253    ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
              |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 142633 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 142592
to top
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete
             sequence
          Length = 141050

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 253   ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
             |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 20743 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 20702
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 253      ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
                |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 10538218 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 10538259
to top
>dbj|AK121279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108G21, full
            insert sequence
          Length = 1998

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 253  ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
            |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 1536 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 1495
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                          
Query: 253      ccggcgtacaggaagaagctgccgccgatggtgatggccttg 294
                |||||| | |||||||||  ||||||||||||||||||||||
Sbjct: 10544257 ccggcgaagaggaagaaggcgccgccgatggtgatggccttg 10544298
to top
>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full
            insert sequence
          Length = 2252

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 53/61 (86%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                        
Query: 256  gcgtacaggaagaagctgccgccgatggtgatggccttggacaaggacaggaaggacatg 315
            ||||||||| ||||||| || |||||||||||||| ||||| |  || ||||||||||||
Sbjct: 1604 gcgtacaggtagaagctccc-ccgatggtgatggcgttggagagcgagaggaaggacatg 1546

             
Query: 316  g 316
            |
Sbjct: 1545 g 1545
to top
>gb|AC148293.6| Medicago truncatula clone mth2-16c13, complete sequence
          Length = 117793

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 280  atggtgatggccttggacaaggacaggaaggacatggaga 319
            ||||||||||| ||||||| ||||||||| | ||||||||
Sbjct: 9684 atggtgatggcgttggacagggacaggaaagtcatggaga 9645
to top
>gb|AF542070.1| Pseudocowpox virus strain VR634 F9L-like protein (F9L) gene, partial
            cds; vascular endothelial growth factor-like protein
            (VEGF) gene, complete cds; and unknown gene
          Length = 2544

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 348  cgcgccgagcgcgaagcccagcgc 371
            ||||||||||||||||||||||||
Sbjct: 2331 cgcgccgagcgcgaagcccagcgc 2308
to top
>emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chromosome 10 Contains the
              gene for a novel thioesterase domain containing protein
              (FLJ11106), the gene for ribonuclease P (38kD) (RPP38), the
              gene for a novel protein (FLJ38219), the gene for a novel
              protein, the NMT2 gene for N-myristoyltransferase 2, the 3'
              end of the gene for a novel protein (LOC221061), a novel
              gene, a pseudogene similar to part of
              glyceraldehyde-3-phosphate dehydrogenase
              (GAPD)(G3PD,GAPDH), a peptidylprolyl isomerase A
              (cyclophilin A) (PPIA)(CYPA,CYPH) pseudogene, a NADH
              dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
              (NDUFA4)(MLRQ) pseudogene and three CpG islands, complete
              sequence
          Length = 194802

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 298    aaggacaggaaggacatggaga 319
              ||||||||||||||||||||||
Sbjct: 108798 aaggacaggaaggacatggaga 108777
to top
>gb|AC074124.4| Homo sapiens BAC clone RP11-763F8 from 4, complete sequence
          Length = 165723

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 216    gaaggtgaagaagaaaatccat 237
              ||||||||||||||||||||||
Sbjct: 142724 gaaggtgaagaagaaaatccat 142703
to top
>emb|AJ532590.1|PMA532590 Plantago major macronuclear mRNA for polyol transporter (plt2 gene)
          Length = 1891

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 205  gtctccggaatgaaggtgaagaagaaaatccatccgag 242
            ||||||||||  || ||||||||||||||||| |||||
Sbjct: 1626 gtctccggaaacaatgtgaagaagaaaatccacccgag 1589
to top
>ref|XM_511685.1| PREDICTED: Pan troglodytes zinc finger CCCH type domain containing 5
            (LOC454890), mRNA
          Length = 3149

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aagctgccgccgatggtgatg 288
            |||||||||||||||||||||
Sbjct: 2288 aagctgccgccgatggtgatg 2268
to top
>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene cluster,
             partial sequence
          Length = 24637

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   gacatggagaccgccgcgctg 330
             |||||||||||||||||||||
Sbjct: 23963 gacatggagaccgccgcgctg 23943
to top
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence
          Length = 188265

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     aaatttggagcttcaattttt 28
             |||||||||||||||||||||
Sbjct: 67819 aaatttggagcttcaattttt 67799
to top
>ref|XM_964385.1| PREDICTED: Tribolium castaneum similar to CG5758-PA, isoform A
            (LOC657966), mRNA
          Length = 1690

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  actttcaccttgtctttcgtg 132
            |||||||||||||||||||||
Sbjct: 1398 actttcaccttgtctttcgtg 1378
to top
>ref|XM_940903.1| PREDICTED: Homo sapiens zinc finger CCCH-type containing 5 (ZC3H5),
            mRNA
          Length = 3603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aagctgccgccgatggtgatg 288
            |||||||||||||||||||||
Sbjct: 1886 aagctgccgccgatggtgatg 1866
to top
>ref|XM_036115.7| PREDICTED: Homo sapiens zinc finger CCCH-type containing 5 (ZC3H5),
            mRNA
          Length = 3603

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aagctgccgccgatggtgatg 288
            |||||||||||||||||||||
Sbjct: 1886 aagctgccgccgatggtgatg 1866
to top
>gb|BC053362.1| Homo sapiens zinc finger CCCH-type containing 5, mRNA (cDNA clone
            IMAGE:6012927), partial cds
          Length = 3856

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aagctgccgccgatggtgatg 288
            |||||||||||||||||||||
Sbjct: 1683 aagctgccgccgatggtgatg 1663
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 368     gcgcgcgcacccgcagcggga 388
               |||||||||||||||||||||
Sbjct: 3811051 gcgcgcgcacccgcagcggga 3811071



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 173     gcttcccgatctcctccagcg 193
               |||||||||||||||||||||
Sbjct: 1829356 gcttcccgatctcctccagcg 1829336
to top
>dbj|AB092604.1| Pectobacterium carotovorum subsp. carotovorum priA, cytR, ftsN
           genes for PriA, transcriptional repressor CytR, FtsN,
           partial and complete cds
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 271 ctgccgccgatggtgatggcc 291
           |||||||||||||||||||||
Sbjct: 747 ctgccgccgatggtgatggcc 767
to top
>dbj|AB051540.1| Homo sapiens mRNA for KIAA1753 protein, partial cds
          Length = 3839

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 268  aagctgccgccgatggtgatg 288
            |||||||||||||||||||||
Sbjct: 1683 aagctgccgccgatggtgatg 1663
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4139099 ctgccgccgatggtgatggc 4139080
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 179     cgatctcctccagcggcagg 198
               ||||||||||||||||||||
Sbjct: 2456204 cgatctcctccagcggcagg 2456223
to top
>ref|XM_846704.1| PREDICTED: Canis familiaris hypothetical protein LOC609444
           (LOC609444), mRNA
          Length = 630

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 429 ggtggagaagaaggacacgt 448
           ||||||||||||||||||||
Sbjct: 537 ggtggagaagaaggacacgt 518
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 350     cgccgagcgcgaagcccagcgcgc 373
               |||||||||||| |||||||||||
Sbjct: 2550002 cgccgagcgcgatgcccagcgcgc 2550025
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     ccgagcgcgaagcccagcgc 371
               ||||||||||||||||||||
Sbjct: 2841228 ccgagcgcgaagcccagcgc 2841209
to top
>emb|Z67734.1|CEB0198 Caenorhabditis elegans Cosmid B0198, complete sequence
          Length = 31278

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   atgaaggtgaagaagaaaatccat 237
             |||||| |||||||||||||||||
Sbjct: 12180 atgaagatgaagaagaaaatccat 12157
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4643715 ctgccgccgatggtgatggc 4643696
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4401019 ctgccgccgatggtgatggc 4401000
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4122044 ctgccgccgatggtgatggc 4122025
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    accgccgcgctggtcacgcg 338
              ||||||||||||||||||||
Sbjct: 561793 accgccgcgctggtcacgcg 561774
to top
>ref|XM_780487.1| PREDICTED: Strongylocentrotus purpuratus similar to isocitrate
           dehydrogenase 2 (NADP+), mitochondrial (LOC580429), mRNA
          Length = 1892

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 276 gccgatggtgatggccttgg 295
           ||||||||||||||||||||
Sbjct: 411 gccgatggtgatggccttgg 392
to top
>emb|X03683.1|ECCYTR E. coli cytR gene coding for Cyt repressor
          Length = 1384

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 ctgccgccgatggtgatggc 290
           ||||||||||||||||||||
Sbjct: 736 ctgccgccgatggtgatggc 755
to top
>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete
              sequence
          Length = 234105

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      agatgaaatttggagcttcaattt 26
              ||||||||||||||||| ||||||
Sbjct: 118423 agatgaaatttggagctacaattt 118400
to top
>gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2 minutes
          Length = 96484

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ctgccgccgatggtgatggc 290
             ||||||||||||||||||||
Sbjct: 85654 ctgccgccgatggtgatggc 85635
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 3512660 ctgccgccgatggtgatggc 3512679
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     agaagctgccgccgatggtg 285
               ||||||||||||||||||||
Sbjct: 3893897 agaagctgccgccgatggtg 3893878
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 350     cgccgagcgcgaagcccagcgcgc 373
               ||||||||||||||||| ||||||
Sbjct: 4638293 cgccgagcgcgaagcccggcgcgc 4638270
to top
>ref|NM_077613.1| Caenorhabditis elegans B0198.1 (tetraspanin) mRNA, complete cds
          Length = 840

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 214 atgaaggtgaagaagaaaatccat 237
           |||||| |||||||||||||||||
Sbjct: 779 atgaagatgaagaagaaaatccat 802
to top
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     cctgtccttcatgccgaaaa 172
               ||||||||||||||||||||
Sbjct: 1126696 cctgtccttcatgccgaaaa 1126715
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 3634119 ctgccgccgatggtgatggc 3634138
to top
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   ggaagaagctgccgccgatggtga 286
             |||||||| |||||||||||||||
Sbjct: 33892 ggaagaagttgccgccgatggtga 33869
to top
>gb|AE005031.1| Halobacterium sp. NRC-1 section 62 of 170 of the complete genome
          Length = 11994

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  cgccgcgatgccggcgtaca 262
            ||||||||||||||||||||
Sbjct: 1377 cgccgcgatgccggcgtaca 1396
to top
>gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, complete sequence
          Length = 194871

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    gacaaggacaggaaggacat 314
              ||||||||||||||||||||
Sbjct: 115711 gacaaggacaggaaggacat 115730
to top
>gb|AF511649.1| Phytophthora sojae necrosis-inducing protein, necrosis-inducing-like
            protein and UDP-glucose 4-epimerase-like protein genes,
            complete cds; and unknown genes
          Length = 10835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 488  ggatcttggtgtccgggtgc 507
            ||||||||||||||||||||
Sbjct: 6665 ggatcttggtgtccgggtgc 6646
to top
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0056I06
          Length = 138653

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    ggaagaagctgccgccgatggtga 286
              |||||||| |||||||||||||||
Sbjct: 133017 ggaagaagttgccgccgatggtga 132994
to top
>ref|XM_319528.2| Anopheles gambiae str. PEST ENSANGP00000017784 (ENSANGG00000015295),
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  gccggcgtacaggaagaagc 271
            ||||||||||||||||||||
Sbjct: 1224 gccggcgtacaggaagaagc 1205
to top
>ref|XM_314193.2| Anopheles gambiae str. PEST ENSANGP00000014442 (ENSANGG00000011953),
            partial mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  gccggcgtacaggaagaagc 271
            ||||||||||||||||||||
Sbjct: 1224 gccggcgtacaggaagaagc 1205
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 267     gaagctgccgccgatggtgatggc 290
               |||||||||||||||| |||||||
Sbjct: 2500538 gaagctgccgccgatgttgatggc 2500561



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 351     gccgagcgcgaagcccagcgcgcgcacc 378
               ||||||||||| ||||||| ||||||||
Sbjct: 1531343 gccgagcgcgacgcccagctcgcgcacc 1531316
to top
>dbj|AK066280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066D13, full
            insert sequence
          Length = 4143

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  ggaagaagctgccgccgatggtga 286
            |||||||| |||||||||||||||
Sbjct: 1157 ggaagaagttgccgccgatggtga 1134
to top
>gb|AC145979.4| Gallus gallus BAC clone CH261-10P22 from chromosome unknown, complete
              sequence
          Length = 243329

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    aggacaggaaggacatggag 318
              ||||||||||||||||||||
Sbjct: 218414 aggacaggaaggacatggag 218395
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4994277 ctgccgccgatggtgatggc 4994258
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4925513 ctgccgccgatggtgatggc 4925494
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 3542733 ctgccgccgatggtgatggc 3542752
to top
>emb|AL671706.8| Mouse DNA sequence from clone RP23-330O24 on chromosome X, complete
             sequence
          Length = 192676

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     agatgaaatttggagcttcaattt 26
             ||||||||||||||||| ||||||
Sbjct: 13382 agatgaaatttggagctacaattt 13359
to top
>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 3977597 ctgccgccgatggtgatggc 3977578
to top
>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     ctgccgccgatggtgatggc 290
               ||||||||||||||||||||
Sbjct: 4338061 ctgccgccgatggtgatggc 4338042
to top
>emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chromosome X, complete
             sequence
          Length = 117773

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ggacaaggacaggaaggaca 313
             ||||||||||||||||||||
Sbjct: 53926 ggacaaggacaggaaggaca 53907


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,036,453
Number of Sequences: 3902068
Number of extensions: 4036453
Number of successful extensions: 84482
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82932
Number of HSP's gapped (non-prelim): 1538
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top