>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score =  210 bits (106), Expect = 1e-51
 Identities = 130/138 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1    actacccaacaactgagcactgatgaaattacatacaagtcctctgtctgggttccgggg 60
            ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| || |
Sbjct: 1164 actacacaacaactgagcactgatgagattacatacaagtcctctgtctgggttcaggtg 1105

                                                                        
Query: 61   aatacagagcaagagcaagagtagcccatcaaacttggaaaacaaattggaattccacgg 120
            ||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||
Sbjct: 1104 aatacagagcaagagcaagagtagtacatcaaacttggaagacaaattggaattccacgg 1045

                              
Query: 121  taacacggacgatgggaa 138
            ||||| ||||||||||||
Sbjct: 1044 taacagggacgatgggaa 1027



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 170 ctcaaaacacccagtttgctcttcgggttgggatggcatctttct 214
           |||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 995 ctcagaacacgcagtttgctcttcgggttgggatggcatctttct 951

>gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, complete sequence
          Length = 182088

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                        
Query: 83     agcccatcaaacttggaaaacaaatt 108
              ||||||||||||||||||||||||||
Sbjct: 178604 agcccatcaaacttggaaaacaaatt 178579

>gb|AC161347.2| Mus musculus chromosome 15, clone RP23-273M5, complete sequence
          Length = 191833

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 83    agcccatcaaacttggaaaacaaatt 108
             ||||||||||||||||||||||||||
Sbjct: 43756 agcccatcaaacttggaaaacaaatt 43781

>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 82      tagcccatcaaacttggaaaa 102
               |||||||||||||||||||||
Sbjct: 1366890 tagcccatcaaacttggaaaa 1366870

>ref|NM_187966.1| Oryza sativa (japonica cultivar-group), Ozsa8386 predicted mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   catcaaacttggaaaacaaa 106
            ||||||||||||||||||||
Sbjct: 1149 catcaaacttggaaaacaaa 1168

>ref|NM_184841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2673

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   catcaaacttggaaaacaaa 106
            ||||||||||||||||||||
Sbjct: 1044 catcaaacttggaaaacaaa 1063

>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0015G17, complete sequence
          Length = 158173

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    catcaaacttggaaaacaaa 106
             ||||||||||||||||||||
Sbjct: 63878 catcaaacttggaaaacaaa 63897

>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20
              map S2137, complete sequence
          Length = 125303

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     catcaaacttggaaaacaaa 106
              ||||||||||||||||||||
Sbjct: 117295 catcaaacttggaaaacaaa 117314

>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence
          Length = 249301

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     gagcaagagcaagagtagcc 86
              ||||||||||||||||||||
Sbjct: 182282 gagcaagagcaagagtagcc 182263

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 22284940 catcaaacttggaaaacaaa 22284921

>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     cagagcaagagcaagagtag 84
              ||||||||||||||||||||
Sbjct: 155822 cagagcaagagcaagagtag 155841

>gb|AC114002.4| Mus musculus BAC clone RP23-165H7 from 12, complete sequence
          Length = 200112

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   aaacttggaaaacaaattgg 110
            ||||||||||||||||||||
Sbjct: 8769 aaacttggaaaacaaattgg 8788

>emb|AL353629.22| Human DNA sequence from clone RP11-30L4 on chromosome 9q22.1-22.33
              Contains the 5' end of a novel gene, two novel genes, the
              C9orf10 gene for chromosome 9 open reading frame 10, the 5'
              end of the PHF2 gene for PHD finger protein 2 and three CpG
              islands, complete sequence
          Length = 170845

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     cttggaaaacaaattggaat 113
              ||||||||||||||||||||
Sbjct: 147472 cttggaaaacaaattggaat 147453

>gb|AC132807.3| Homo sapiens chromosome 3 clone RP11-147G2, complete sequence
          Length = 171678

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    catcaaacttggaaaacaaa 106
             ||||||||||||||||||||
Sbjct: 75583 catcaaacttggaaaacaaa 75602

>gb|AC159198.2| Mus musculus BAC clone RP23-388C15 from chromosome 12, complete sequence
          Length = 213311

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     aaacttggaaaacaaattgg 110
              ||||||||||||||||||||
Sbjct: 196800 aaacttggaaaacaaattgg 196819

>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence
          Length = 204400

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     aattacatacaagtcctctg 46
              ||||||||||||||||||||
Sbjct: 181750 aattacatacaagtcctctg 181769

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 27969421 catcaaacttggaaaacaaa 27969402



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 27921916 catcaaacttggaaaacaaa 27921897



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      catcaaacttggaaaacaaa 106
               ||||||||||||||||||||
Sbjct: 8213940 catcaaacttggaaaacaaa 8213959

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 20115151 catcaaacttggaaaacaaa 20115170

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 25038552 catcaaacttggaaaacaaa 25038533

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 22277969 catcaaacttggaaaacaaa 22277950

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 34118086 catcaaacttggaaaacaaa 34118067



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      catcaaacttggaaaacaaa 106
               ||||||||||||||||||||
Sbjct: 8841529 catcaaacttggaaaacaaa 8841548

>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     catcaaacttggaaaacaaa 106
              ||||||||||||||||||||
Sbjct: 114564 catcaaacttggaaaacaaa 114545

>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    catcaaacttggaaaacaaa 106
             ||||||||||||||||||||
Sbjct: 77557 catcaaacttggaaaacaaa 77576

>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0047P18
          Length = 169128

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   catcaaacttggaaaacaaa 106
            ||||||||||||||||||||
Sbjct: 8651 catcaaacttggaaaacaaa 8670

>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0025J22
          Length = 175355

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    catcaaacttggaaaacaaa 106
             ||||||||||||||||||||
Sbjct: 94668 catcaaacttggaaaacaaa 94649

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       catcaaacttggaaaacaaa 106
                ||||||||||||||||||||
Sbjct: 27945477 catcaaacttggaaaacaaa 27945458



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      catcaaacttggaaaacaaa 106
               ||||||||||||||||||||
Sbjct: 8284703 catcaaacttggaaaacaaa 8284722

>emb|CT030644.8| Mouse DNA sequence from clone RP24-82E11 on chromosome 9, complete
              sequence
          Length = 211707

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     aattacatacaagtcctctg 46
              ||||||||||||||||||||
Sbjct: 202995 aattacatacaagtcctctg 202976

>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    gagcaagagcaagagtagcc 86
             ||||||||||||||||||||
Sbjct: 71157 gagcaagagcaagagtagcc 71138

>emb|AL596062.13| Mouse DNA sequence from clone RP23-284O21 on chromosome 11, complete
              sequence
          Length = 155151

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     aattacatacaagtcctctg 46
              ||||||||||||||||||||
Sbjct: 143584 aattacatacaagtcctctg 143565


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,097,634
Number of Sequences: 3902068
Number of extensions: 2097634
Number of successful extensions: 126772
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 126404
Number of HSP's gapped (non-prelim): 368
length of query: 214
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 192
effective length of database: 17,147,199,772
effective search space: 3292262356224
effective search space used: 3292262356224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)