>UL53_HCMVA (P16794) Protein UL53 (HFRF2 protein)|
          Length = 376

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 302 GCPPSARSSSHQPHACPPSSALEWNPY 222
           GC PS+ S S  PH  PPS A + + Y
Sbjct: 321 GCGPSSSSQSTPPHLHPPSQATQPHHY 347

>MATK_DANSP (Q9MUY2) Maturase K (Intron maturase)|
          Length = 513

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +2

Query: 5   QTQTRYSFHTRLSSCAYTSQTKKKSATRCVVAARRQSF-KSFFTIRFPIDRMQQHTPYLL 181
           QT  R  +  RLS CA T   K KS  R  +      F + FFT        ++   + L
Sbjct: 427 QTLYRLKYILRLS-CARTLARKHKSTVRTFMQRLGSVFLEEFFT--------EEEQVFSL 477

Query: 182 TYLRTTHYP*AKTHRDSI 235
            +++TTH+    +H D I
Sbjct: 478 MFIKTTHFSFHGSHSDRI 495

>YG4U_YEAST (P53308) Hypothetical 11.9 kDa protein in DIE2-SMI1 intergenic|
           region
          Length = 114

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 13/72 (18%)
 Frame = +2

Query: 329 SSSTLASFSPRLASADARFSSALCRALATSF-----------CVFSTALARCSSSFLSI- 472
           +SSTLAS S  ++ +   F S++C   ++SF           C FS+     SSSFLS+ 
Sbjct: 17  ASSTLAS-SLLISFSSFLFISSVCLFTSSSFFADSVTCSFSTCSFSSTFGCFSSSFLSLS 75

Query: 473 -FLSQADALSTC 505
             +S   AL +C
Sbjct: 76  CLMSTLSALISC 87


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,039,367
Number of Sequences: 219361
Number of extensions: 1055616
Number of successful extensions: 3208
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3197
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)