Clone Name | rbart16b03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DEDD2_HUMAN (Q8WXF8) DNA-binding death effector domain-containin... | 33 | 0.52 | 2 | IDD_HUMAN (P98153) Integral membrane protein DGCR2/IDD precursor | 33 | 0.52 | 3 | K1849_HUMAN (Q96JH8) Protein KIAA1849 | 29 | 7.5 | 4 | VLPD_MYCHR (Q49536) Variant surface antigen D precursor (VLPD pr... | 28 | 9.7 | 5 | HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h) | 28 | 9.7 |
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>DEDD2_HUMAN (Q8WXF8) DNA-binding death effector domain-containing protein 2| (FADD-like anti-apoptotic molecule 3) (DED-containing protein FLAME-3) Length = 326 Score = 32.7 bits (73), Expect = 0.52 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Frame = -2 Query: 482 RLRPHHGALPFSCRQGARRGGEPRHELGRENTYRRSAGLCPRLRQSAGTAXXXXXXXXXX 303 R+ H LP R+ R R+ G ++ +R+ G C R RQS+ +A Sbjct: 91 RVLARHDLLPHLARKRRRPVSPERYSYGTSSSSKRTEGSCRRRRQSSSSANSQQGQWETG 150 Query: 302 XXXXPADRQDR------ALRAPRGLPWRVRAAQEQYPDGEP 198 R+ R A R RG P A Q+Q P Sbjct: 151 SPPTKRQRRSRGRPSGGARRRRRGAP---AAPQQQSEPARP 188
>IDD_HUMAN (P98153) Integral membrane protein DGCR2/IDD precursor| Length = 550 Score = 32.7 bits (73), Expect = 0.52 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 479 LRPHHGALPFSCRQGARRGGEPRH 408 +RPHHG RQG RGG+P H Sbjct: 73 VRPHHGKEAVDPRQGRARGGDPSH 96
>K1849_HUMAN (Q96JH8) Protein KIAA1849| Length = 1073 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 330 TSSPSRLTQTRTETSRAPISILPAKLMSRLPSSPCP 437 +S P RL +T +ETS +P++ LPA P P P Sbjct: 205 SSPPPRLRRTVSETSLSPVNALPAAAQG--PEEPGP 238
>VLPD_MYCHR (Q49536) Variant surface antigen D precursor (VLPD prolipoprotein)| Length = 168 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = +1 Query: 67 QTSTTN*KQEN*TNPSNAMLLFRAGSNSTASSKEQASEQLTSLTGSPSGYCS*AARTRQG 246 Q+ +T+ +E ++ S + + S+ST++SKEQ S TS + S + QG Sbjct: 84 QSDSTSTSKEQGSSDSTSTSKEQGSSDSTSTSKEQGSSDSTSTSKEQGSSDSTSTSKEQG 143 Query: 247 S 249 S Sbjct: 144 S 144
>HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h)| Length = 315 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 333 SSPSRLTQTRTETSRAPISILPAKLMSRLPSSPCP 437 SSP + Q +TET A S+ KL + P P P Sbjct: 205 SSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPPP 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,958,050 Number of Sequences: 219361 Number of extensions: 696389 Number of successful extensions: 2250 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2247 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)