Clone Name | rbart16a02 |
---|---|
Clone Library Name | barley_pub |
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 410 bits (207), Expect = e-111 Identities = 266/283 (93%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 187 tcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgcc 246 ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 2659 tcactcccagatgccgacctccatgaatccgtcctcggtggcgcagcctctgaacatgcc 2600 Query: 247 ggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcgaa 306 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2599 ggtgcagttgaacccgtatgccacctcgccggtgccggacacggcgatgagcccggcgaa 2540 Query: 307 cccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcag-cgggaggccct 365 ||| ||||||||||| |||||||||||||||||||||||||||||||| || || |||| Sbjct: 2539 cccttcgtcgagccgttccttgacgcagaagtccacggcctcctgcagaaggcagcccct 2480 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 || | ||||| ||||| ||||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 2479 tg-attccatcacggcggccacgtcccgcgccagcgtggagcggatgatggcctcgccct 2421 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggtgcc 468 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2420 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggtgcc 2378
>gb|AF290446.1|AF290446 Lolium perenne clone LpASN-2 unknown sequence Length = 2449 Score = 363 bits (183), Expect = 3e-97 Identities = 258/283 (91%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 2442 ctcactcccagatgccgacctccatgaagccgtcctcggtggcgcaccccctgaacatgc 2383 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 | |||||||||||||| || |||||||| || || || ||||||||||||||||| |||| Sbjct: 2382 cagtgcagttgaacccatacgccacctcccccgtccccgacacggcgatgagccccgcga 2323 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 | ||||| || |||||||| |||||||||||||| ||||||||||||||||| || |||| Sbjct: 2322 agccctcatcaagccgctctttgacgcagaagtcgacggcctcctgcagcggcagcccct 2263 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||||||||| ||||||||||| || ||||| ||||||||||||||||| |||| Sbjct: 2262 tgtactccatgacggcggccacgtcccgcgcgagcgtggagcggatgatggcctcgccct 2203 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggtgcc 468 | ||||||||||||||||||||| |||||||||| |||||||| Sbjct: 2202 cccccgtgcacgacacggcgcagagcccgcacgcataggtgcc 2160
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 301 bits (152), Expect = 1e-78 Identities = 248/280 (88%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 88826 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccccctgaacatgc 88767 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 88766 cggtgcagttgaagccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 88707 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| |||||||||||||||||||||||| |||| ||||||||||||||| | |||| Sbjct: 88706 acccttcgtcgagccgctccttgacgcagtagtcgacggcctcctgcagcccggcgcccc 88647 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 88646 tgtactccatcacggcggcgacgtcgcgcgctagcgtggagcggatgatggcctcgcctt 88587 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 88586 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 88547
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 293 bits (148), Expect = 3e-76 Identities = 247/280 (88%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 33198197 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgc 33198138 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 33198137 cggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 33198078 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| Sbjct: 33198077 acccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccc 33198018 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 33198017 tgtactccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgcctt 33197958 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 33197957 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 33197918 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 30489021 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 30489080 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 30489081 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 30489140 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | ||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 30489141 ccggcacccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 30489200 Query: 416 gcct 419 |||| Sbjct: 30489201 gcct 30489204 Score = 135 bits (68), Expect = 1e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 27313726 ctgaacatgccggtgcagttgaacccgtgcgccacatcgccggtgccgaacaccgcgatg 27313667 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| || ||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 27313666 agcccgatgagcccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 27313607 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 27313606 ccggcgcccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 27313547
>dbj|AK121820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099C17, full insert sequence Length = 1286 Score = 293 bits (148), Expect = 3e-76 Identities = 247/280 (88%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 1075 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgc 1016 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 1015 cggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 956 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| Sbjct: 955 acccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccc 896 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 895 tgtactccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgcctt 836 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 835 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 796
>dbj|AK068693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163N01, full insert sequence Length = 2801 Score = 293 bits (148), Expect = 3e-76 Identities = 247/280 (88%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 2588 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgc 2529 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 2528 cggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 2469 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| Sbjct: 2468 acccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccc 2409 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 2408 tgtactccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgcctt 2349 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 2348 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 2309
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 293 bits (148), Expect = 3e-76 Identities = 247/280 (88%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 80846 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgc 80787 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 80786 cggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 80727 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| Sbjct: 80726 acccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccc 80667 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 |||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 80666 tgtactccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgcctt 80607 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 80606 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 80567
>ref|XM_474137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 291 bits (147), Expect = 1e-75 Identities = 246/279 (88%) Strand = Plus / Minus Query: 187 tcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgcc 246 ||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1002 tcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgcc 943 Query: 247 ggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcgaa 306 |||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 942 ggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcgaa 883 Query: 307 cccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccctt 366 ||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| | Sbjct: 882 cccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccct 823 Query: 367 gtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccctc 426 ||||||||| ||||| || ||||| || || ||||| ||||||||||||||||| || || Sbjct: 822 gtactccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgccttc 763 Query: 427 gcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 |||||||||||||| ||||| |||||||||||||| Sbjct: 762 ccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 724
>dbj|AK058733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F12, full insert sequence Length = 1187 Score = 285 bits (144), Expect = 6e-74 Identities = 246/280 (87%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgc 245 |||||||||||||||||||||||||||| ||||||||||| ||||| || |||||||||| Sbjct: 975 ctcactcccagatgccgacctccatgaatccgtcctcggtggcgcaccctctgaacatgc 916 Query: 246 cggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcga 305 ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |||| Sbjct: 915 cggtgcagttgaacccgtacgccacctcgcccgtgctggacacggcgatgagccccgcga 856 Query: 306 acccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccct 365 |||| ||||||||||||| |||||||||| |||| ||||||||||||||| | |||| Sbjct: 855 acccttcgtcgagccgcttcttgacgcagtagtcgacggcctcctgcagcccggcgcccc 796 Query: 366 tgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccct 425 ||||| |||| ||||| || ||||| || || ||||| ||||||||||||||||| || | Sbjct: 795 tgtaccccatcacggcggcgacgtcgcgcgcgagcgtggagcggatgatggcctcgcctt 736 Query: 426 cgcccgtgcacgacacggcgcagtgcccgcacgcgtaggt 465 | |||||||||||||| ||||| |||||||||||||| Sbjct: 735 cccccgtgcacgacaccgcgcacgcgccgcacgcgtaggt 696
>gb|AY110762.1| Zea mays CL2945_1 mRNA sequence Length = 487 Score = 270 bits (136), Expect = 4e-69 Identities = 230/264 (87%) Strand = Plus / Plus Query: 185 gctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatg 244 ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||| Sbjct: 188 gctcactcccagatgccgacctccatgaacccgtcctcggnggcgcagccccggaacatg 247 Query: 245 ccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatgagcccggcg 304 |||| ||||||||| ||||| ||||||||||||||||| || |||| |||||| |||||| Sbjct: 248 ccggngcagttgaatccgtacgccacctcgccggtgccggagacggngatgaggccggcg 307 Query: 305 aacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagcgggaggccc 364 || |||| |||||| ||||||||||||||| || | ||||||| |||||| || || ||| Sbjct: 308 aatccctggtcgaggcgctccttgacgcagtaggcgacggcctgctgcaggggcagtccc 367 Query: 365 ttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatggcctctccc 424 |||||||||||||| ||||||| || || ||||| || ||||||||||||| ||| Sbjct: 368 ttgtactccatgacnnnnnccacgtcgcgcgcgagcgtgcaggggatgatggcctcgccc 427 Query: 425 tcgcccgtgcacgacacggcgcag 448 ||||||||||||||||||| |||| Sbjct: 428 tcgcccgtgcacgacacggtgcag 451
>dbj|AB097469.1| Oryza sativa (japonica cultivar-group) transposon AnacB8(Asp) DNA, complete sequence Length = 1892 Score = 167 bits (84), Expect = 4e-38 Identities = 159/184 (86%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1444 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 1385 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 1384 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 1325 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || | ||| || |||||||| ||||| |||||| Sbjct: 1324 ccggcgcccctgtactccatcacggcggcgatgtcacgcgccagcgtggagcgtatgatg 1265 Query: 416 gcct 419 |||| Sbjct: 1264 gcct 1261
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 167 bits (84), Expect = 4e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 32043374 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 32043433 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 32043434 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 32043493 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || | ||| || |||||||| ||||| |||||| Sbjct: 32043494 ccggcgcccctgtactccatcacggcggcgatgtcacgcgccagcgtggagcgtatgatg 32043553 Query: 416 gcct 419 |||| Sbjct: 32043554 gcct 32043557
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 167 bits (84), Expect = 4e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 85188 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 85247 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 85248 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 85307 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || | ||| || |||||||| ||||| |||||| Sbjct: 85308 ccggcgcccctgtactccatcacggcggcgatgtcacgcgccagcgtggagcgtatgatg 85367 Query: 416 gcct 419 |||| Sbjct: 85368 gcct 85371
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 167 bits (84), Expect = 4e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 140101 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 140160 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 140161 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 140220 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || | ||| || |||||||| ||||| |||||| Sbjct: 140221 ccggcgcccctgtactccatcacggcggcgatgtcacgcgccagcgtggagcgtatgatg 140280 Query: 416 gcct 419 |||| Sbjct: 140281 gcct 140284
>ref|XM_473784.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 627 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 530 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 471 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 470 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 411 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | ||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 410 ccggcacccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 351 Query: 416 gcct 419 |||| Sbjct: 350 gcct 347
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 122398 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 122457 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 122458 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 122517 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | ||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 122518 ccggcacccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 122577 Query: 416 gcct 419 |||| Sbjct: 122578 gcct 122581
>dbj|AB097471.1| Oryza sativa (japonica cultivar-group) transposon AnacB10(Asp) DNA, complete sequence Length = 1909 Score = 159 bits (80), Expect = 1e-35 Identities = 158/184 (85%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 1484 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccggacaccgcgatg 1425 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 1424 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 1365 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | ||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 1364 ccggcacccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 1305 Query: 416 gcct 419 |||| Sbjct: 1304 gcct 1301
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 151 bits (76), Expect = 2e-33 Identities = 109/120 (90%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 25900978 ctgaacatgccggtgcagttgaacccgtacgccacctcgccggtgccggacaccgcgatg 25900919 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 25900918 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 25900859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 151 bits (76), Expect = 2e-33 Identities = 109/120 (90%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 25829154 ctgaacatgccggtgcagttgaacccgtacgccacctcgccggtgccggacaccgcgatg 25829095 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 25829094 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 25829035
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 151 bits (76), Expect = 2e-33 Identities = 109/120 (90%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 122429 ctgaacatgccggtgcagttgaacccgtacgccacctcgccggtgccggacaccgcgatg 122370 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 122369 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 122310
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 55210 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 55151 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 55150 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 55091 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 55090 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 55031 Query: 416 gcct 419 |||| Sbjct: 55030 gcct 55027
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 190188 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 190129 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 190128 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 190069 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 190068 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 190009 Query: 416 gcct 419 |||| Sbjct: 190008 gcct 190005
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 132410 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 132469 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 132470 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 132529 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 132530 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 132589 Query: 416 gcct 419 |||| Sbjct: 132590 gcct 132593
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 28949115 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 28949174 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 28949175 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 28949234 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 28949235 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 28949294 Query: 416 gcct 419 |||| Sbjct: 28949295 gcct 28949298 Score = 135 bits (68), Expect = 1e-28 Identities = 156/184 (84%), Gaps = 1/184 (0%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 14793668 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccgaacaccgcgatg 14793609 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| | ||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 14793608 agcccgatgaaccctttgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 14793549 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| | |||| ||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 14793548 ccggcgcccct-tacttcatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 14793490 Query: 416 gcct 419 |||| Sbjct: 14793489 gcct 14793486 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 407 cggatgatggcctctccctcgcccgtgcacgacacggcgca 447 |||||||||||||| ||| |||||||| |||||||||||| Sbjct: 22063519 cggatgatggcctcgcccacgcccgtggccgacacggcgca 22063559
>dbj|AB097470.1| Oryza sativa (japonica cultivar-group) transposon AnacB9(Asp) DNA, complete sequence Length = 1886 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 1464 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 1405 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 1404 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 1345 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 1344 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 1285 Query: 416 gcct 419 |||| Sbjct: 1284 gcct 1281
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 6e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 ||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 29040537 ctgaacatgccggtgtagttgaacccgtgcgccacctcgccggtgctggacaccacgatg 29040596 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 29040597 agcccgatgaacccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 29040656 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| |||||||||| ||||| || ||||| | |||||||| ||||| |||||| Sbjct: 29040657 ccggcgcccctgtactccatcacggcggcgacgtcgcacgccagcgtggagcgtatgatg 29040716 Query: 416 gcct 419 |||| Sbjct: 29040717 gcct 29040720 Score = 135 bits (68), Expect = 1e-28 Identities = 156/184 (84%), Gaps = 1/184 (0%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 14788202 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccgaacaccgcgatg 14788143 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| | ||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 14788142 agcccgatgaaccctttgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 14788083 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| | |||| ||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 14788082 ccggcgcccct-tacttcatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 14788024 Query: 416 gcct 419 |||| Sbjct: 14788023 gcct 14788020 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 407 cggatgatggcctctccctcgcccgtgcacgacacggcgca 447 |||||||||||||| ||| |||||||| |||||||||||| Sbjct: 22056548 cggatgatggcctcgcccacgcccgtggccgacacggcgca 22056588
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 4e-29 Identities = 156/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 19741535 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgctggacaccgcgatg 19741594 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| ||| ||||||| ||||| |||||||||||| |||| | |||||| |||||| Sbjct: 19741595 agcccgatgaa--cctcgtctagccgttccttgacgcagtagtcgatggcctcatgcagc 19741652 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 || |||| |||||||||| ||||| || |||| || |||||||| |||| |||||| Sbjct: 19741653 ccgacgcccctgtactccataacggcggcggcgtcgcgcgccagcgtggagcatatgatg 19741712 Query: 416 gcct 419 |||| Sbjct: 19741713 gcct 19741716
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 137 bits (69), Expect = 4e-29 Identities = 156/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 50086 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgctggacaccgcgatg 50145 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| ||| ||||||| ||||| |||||||||||| |||| | |||||| |||||| Sbjct: 50146 agcccgatgaa--cctcgtctagccgttccttgacgcagtagtcgatggcctcatgcagc 50203 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 || |||| |||||||||| ||||| || |||| || |||||||| |||| |||||| Sbjct: 50204 ccgacgcccctgtactccataacggcggcggcgtcgcgcgccagcgtggagcatatgatg 50263 Query: 416 gcct 419 |||| Sbjct: 50264 gcct 50267
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 137 bits (69), Expect = 4e-29 Identities = 156/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 98293 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgctggacaccgcgatg 98352 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| ||| ||||||| ||||| |||||||||||| |||| | |||||| |||||| Sbjct: 98353 agcccgatgaa--cctcgtctagccgttccttgacgcagtagtcgatggcctcatgcagc 98410 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 || |||| |||||||||| ||||| || |||| || |||||||| |||| |||||| Sbjct: 98411 ccgacgcccctgtactccataacggcggcggcgtcgcgcgccagcgtggagcatatgatg 98470 Query: 416 gcct 419 |||| Sbjct: 98471 gcct 98474
>ref|XM_473396.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 135 bits (68), Expect = 1e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 839 ctgaacatgccggtgcagttgaacccgtgcgccacatcgccggtgccgaacaccgcgatg 780 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| || ||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 779 agcccgatgagcccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 720 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 719 ccggcgcccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 660
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 135 bits (68), Expect = 1e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 49654 ctgaacatgccggtgcagttgaacccgtgcgccacatcgccggtgccgaacaccgcgatg 49595 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| || ||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 49594 agcccgatgagcccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 49535 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 49534 ccggcgcccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 49475
>dbj|AB097472.1| Oryza sativa (japonica cultivar-group) transposon AnacB11(Asp) DNA, complete sequence Length = 1925 Score = 135 bits (68), Expect = 1e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||| Sbjct: 1484 ctgaacatgccggtgcagttgaacccgtgcgccacatcgccggtgccgaacaccgcgatg 1425 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| || ||| ||||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 1424 agcccgatgagcccttcgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 1365 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| || ||||||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 1364 ccggcgcccctgaactccatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 1305
>dbj|AB097468.1| Oryza sativa (japonica cultivar-group) transposon AnacB7(Asp) DNA, complete sequence Length = 1845 Score = 135 bits (68), Expect = 1e-28 Identities = 156/184 (84%), Gaps = 1/184 (0%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 1395 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccgaacaccgcgatg 1336 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| | ||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 1335 agcccgatgaaccctttgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 1276 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| | |||| ||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 1275 ccggcgcccct-tacttcatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 1217 Query: 416 gcct 419 |||| Sbjct: 1216 gcct 1213
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 135 bits (68), Expect = 1e-28 Identities = 156/184 (84%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 139100 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccgaacaccgcgatg 139159 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcctgcagc 355 |||||| |||||| | ||| ||||| |||||||||||| |||| | ||||||||||||| Sbjct: 139160 agcccgatgaaccctttgtccagccgttccttgacgcagtagtcgatggcctcctgcagc 139219 Query: 356 gggaggcccttgtactccatgacggccgccacgtcccgtgccagcgtagagcggatgatg 415 | |||| | |||| ||| ||||| || ||||| || |||||||| ||||| |||||| Sbjct: 139220 ccggcgcccct-tacttcatcacggcggcgacgtcgcgcgccagcgtggagcgtatgatg 139278 Query: 416 gcct 419 |||| Sbjct: 139279 gcct 139282
>ref|XM_470728.1| Oryza sativa (japonica cultivar-group), mRNA Length = 390 Score = 115 bits (58), Expect = 1e-22 Identities = 100/114 (87%) Strand = Plus / Minus Query: 236 ctgaacatgccggtgcagttgaacccgtatgccacctcgccggtgcctgacacggcgatg 295 |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 335 ctgaacatgccggtgcagttgaacccgtgcgccacctcgccggtgccgaacaccgcgatg 276 Query: 296 agcccggcgaacccctcgtcgagccgctccttgacgcagaagtccacggcctcc 349 |||||| |||||| | ||| ||||| |||||||||||| |||| | ||||||| Sbjct: 275 agcccgatgaaccctttgtccagccgttccttgacgcagtagtcgatggcctcc 222
>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321, complete sequence Length = 127049 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 203 acctccatgaagccgtcctcggttgcgcagcccctgaacatgccggtgcagttgaacccg 262 ||||||||||| || ||||| || || |||||||||||||||||| ||||||| || || Sbjct: 119637 acctccatgaacccatcctcagtggcacagcccctgaacatgccgttgcagttaaaacca 119696 Query: 263 tatgccacctcgccggtgcctgacacggcgatgag 297 || ||||| || |||||| |||||||||||||| Sbjct: 119697 taagccacttcaccggtgtgggacacggcgatgag 119731 Score = 44.1 bits (22), Expect = 0.41 Identities = 37/42 (88%) Strand = Plus / Plus Query: 361 gcccttgtactccatgacggccgccacgtcccgtgccagcgt 402 |||||||||||||||||| || ||||| || || |||||||| Sbjct: 119795 gcccttgtactccatgacagctgccacctcacgcgccagcgt 119836
>gb|DQ300284.2| Phaseolus vulgaris L-asparaginase 2 mRNA, complete cds Length = 981 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 191 tcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgccggtg 250 |||||||| || ||| ||||||| || |||||||| |||||||||||||||||| || | Sbjct: 977 tcccagattccaaccaccatgaatccatcctcggtggcgcagcccctgaacatggcgtta 918 Query: 251 cagttgaa 258 |||||||| Sbjct: 917 cagttgaa 910 Score = 48.1 bits (24), Expect = 0.026 Identities = 84/104 (80%) Strand = Plus / Minus Query: 335 aagtccacggcctcctgcagcgggaggcccttgtactccatgacggccgccacgtcccgt 394 |||||||| ||||||||||| | || |||||||| ||||| || || ||||| || || Sbjct: 833 aagtccacagcctcctgcagttgcagtcccttgtattccatcactgctgccacctcacgc 774 Query: 395 gccagcgtagagcggatgatggcctctccctcgcccgtgcacga 438 |||||||| || ||||| ||||| || |||||||||||||| Sbjct: 773 gccagcgtgccacgtatgatagcctccccttcgcccgtgcacga 730
>gb|AY559189.1| Zea mays isolate mon00132 Ac insertion site Length = 664 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 336 agtccacggcctcctgcagcgggaggcccttgtactccatgac 378 |||| ||||||| |||||| || |||||||||||||||||||| Sbjct: 336 agtcgacggcctgctgcaggggtaggcccttgtactccatgac 378
>ref|NM_184799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 407 cggatgatggcctctccctcgcccgtgcacgacacggcgca 447 |||||||||||||| ||| |||||||| |||||||||||| Sbjct: 680 cggatgatggcctcgcccacgcccgtggccgacacggcgca 640
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 407 cggatgatggcctctccctcgcccgtgcacgacacggcgca 447 |||||||||||||| ||| |||||||| |||||||||||| Sbjct: 84763 cggatgatggcctcgcccacgcccgtggccgacacggcgca 84723
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 288 cggcgatgagcccggcgaacccctc 312 ||||||||||||||||||||||||| Sbjct: 18959 cggcgatgagcccggcgaacccctc 18935
>gb|AY096000.1| Glycine max L-asparaginase mRNA, complete cds Length = 1258 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Minus Query: 191 tcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgcc 246 |||||||| ||||||||||||||||| | || || || |||||||| |||||||| Sbjct: 1033 tcccagattccgacctccatgaagccattttcagtggcacagcccctaaacatgcc 978
>ref|NM_112485.2| Arabidopsis thaliana asparaginase AT3G16150 mRNA, complete cds Length = 1278 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1036 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 979
>emb|BX822707.1|CNS0A607 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1017 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 960
>emb|BX822223.1|CNS0A5VW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1205 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1017 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 960
>gb|AY086130.1| Arabidopsis thaliana clone 21689 mRNA, complete sequence Length = 1202 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1035 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 978
>dbj|AK118259.1| Arabidopsis thaliana At3g16150 mRNA for putative L-asparaginase, complete cds, clone: RAFL19-56-B19 Length = 1291 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 1124 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 1067
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Minus Query: 186 ctcactcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacat 243 |||||||||| || | ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 65253 ctcactcccaaatagcaacctccatgaatccatcctcagttgcacatcccctgaacat 65196
>gb|BT024724.1| Arabidopsis thaliana At3g16150 mRNA, complete cds Length = 978 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 203 acctccatgaagccgtcctcggttgcgcagcccctgaacat 243 ||||||||||| || ||||| ||||| || ||||||||||| Sbjct: 962 acctccatgaatccatcctcagttgcacatcccctgaacat 922
>dbj|AK069458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020F03, full insert sequence Length = 1188 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 407 cggatgatggcctctccctcgcccgtgcacgacacggcgca 447 |||||||||||||| ||| ||||||| |||||||||||| Sbjct: 760 cggatgatggcctcgcccacgcccgttgccgacacggcgca 720
>ref|XM_361629.1| Magnaporthe grisea 70-15 hypothetical protein (MG04103.4) partial mRNA Length = 957 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gagcccggcgaacccctcgt 314 |||||||||||||||||||| Sbjct: 216 gagcccggcgaacccctcgt 197
>ref|XM_843730.1| PREDICTED: Canis familiaris hypothetical protein LOC607128 (LOC607128), mRNA Length = 2058 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gtccacggcctcctgcagcg 356 |||||||||||||||||||| Sbjct: 1326 gtccacggcctcctgcagcg 1307
>ref|XM_766231.1| Giardia lamblia ATCC 50803 n-acetyltransferase subunit (GLP_38_12750_13394) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 acccctcgtcgagccgctcc 325 |||||||||||||||||||| Sbjct: 412 acccctcgtcgagccgctcc 393
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 cctcgtcgagccgctccttgacgc 332 |||||||||||||| ||||||||| Sbjct: 2752580 cctcgtcgagccgcaccttgacgc 2752557
>emb|AL583918.1|MLEPRTN2 Mycobacterium leprae strain TN complete genome; segment 2/10 Length = 344050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ggcgaacccctcgtcgagcc 320 |||||||||||||||||||| Sbjct: 94915 ggcgaacccctcgtcgagcc 94896
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 cctcgtcgagccgctccttgacgc 332 |||||||||||||| ||||||||| Sbjct: 31380 cctcgtcgagccgcgccttgacgc 31403
>gb|AF317730.1|AF317730 Giardia intestinalis phosphomannomutase-2 gene, complete cds Length = 3374 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 acccctcgtcgagccgctcc 325 |||||||||||||||||||| Sbjct: 2497 acccctcgtcgagccgctcc 2516
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 acaggatggccaaatgtatg 138 |||||||||||||||||||| Sbjct: 3149407 acaggatggccaaatgtatg 3149426
>emb|AL954673.5| Zebrafish DNA sequence from clone BUSM1-122B7 in linkage group 20, complete sequence Length = 84303 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 aaatgtatgtacacacaata 149 |||||||||||||||||||| Sbjct: 3989 aaatgtatgtacacacaata 3970
>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence Length = 222413 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 agctcatggttatgaaggaa 71 |||||||||||||||||||| Sbjct: 183980 agctcatggttatgaaggaa 183999
>dbj|AB089506.1| Glycine max GM-ASNASE1 mRNA for L-asparaginase, complete cds Length = 1010 Score = 40.1 bits (20), Expect = 6.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 191 tcccagatgccgacctccatgaagccgtcctcggttgcgcagcccctgaacatgcc 246 |||||||| || |||||||||||||| | || || || |||||||| |||||||| Sbjct: 980 tcccagattccaacctccatgaagccattttcagtggcacagcccctaaacatgcc 925
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 cggcgatgagcccggcgaac 307 |||||||||||||||||||| Sbjct: 2426367 cggcgatgagcccggcgaac 2426386
>gb|DQ007329.1| Tetrasphaera nostocoidensis strain Ben 70 DNA-dependent RNA polymerase beta' subunit gene, partial cds Length = 550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 agtccacggcctcctgcagc 355 |||||||||||||||||||| Sbjct: 89 agtccacggcctcctgcagc 70
>gb|DQ007326.1| Tetrasphaera australiensis strain Ben 110 DNA-dependent RNA polymerase beta' subunit gene, partial cds Length = 550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 agtccacggcctcctgcagc 355 |||||||||||||||||||| Sbjct: 89 agtccacggcctcctgcagc 70
>gb|DQ007325.1| Tetrasphaera australiensis strain Ben 109 DNA-dependent RNA polymerase beta' subunit gene, partial cds Length = 550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 agtccacggcctcctgcagc 355 |||||||||||||||||||| Sbjct: 89 agtccacggcctcctgcagc 70
>emb|AL928870.5| Zebrafish DNA sequence from clone CH211-237D5 in linkage group 20, complete sequence Length = 179253 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 aaatgtatgtacacacaata 149 |||||||||||||||||||| Sbjct: 40238 aaatgtatgtacacacaata 40219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,648,903 Number of Sequences: 3902068 Number of extensions: 2648903 Number of successful extensions: 51660 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 51179 Number of HSP's gapped (non-prelim): 462 length of query: 469 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 447 effective length of database: 17,147,199,772 effective search space: 7664798298084 effective search space used: 7664798298084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)