>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 1029

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/65 (33%), Positives = 33/65 (50%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP   P S TN    SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 955  SNSDSDSGSNNNVVPPN-SPKSGTN---ASNKNEAKESKEPLPDTGSEDEANTSLIWGLL 1010

Query: 200  HSPGS 214
             S GS
Sbjct: 1011 ASLGS 1015

>ICAM1_RAT (Q00238) Intercellular adhesion molecule 1 precursor (ICAM-1)|
          Length = 545

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 62  PPKWEPLSSTNHQDTSNKRVFLVAI---IPYKNLFSEEGVHSSLLWGKPHSPGSSCFGSF 232
           PP  +   + N     +KR F  +    +  K+LF  + +   +L+G PH     C G++
Sbjct: 360 PPTSQIQFTLNASPEDHKRRFFCSAALEVDGKSLFKNQTLELHVLYG-PHLDKKDCLGNW 418

Query: 233 TW 238
           TW
Sbjct: 419 TW 420

>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 946

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 872  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 927

Query: 200  HSPGS 214
             S GS
Sbjct: 928  ASIGS 932

>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 928

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 854  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 909

Query: 200  HSPGS 214
             S GS
Sbjct: 910  ASIGS 914

>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 935

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 861  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 916

Query: 200  HSPGS 214
             S GS
Sbjct: 917  ASLGS 921

>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 989

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 915  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 970

Query: 200  HSPGS 214
             S GS
Sbjct: 971  ASLGS 975

>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 933

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 859  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 914

Query: 200  HSPGS 214
             S GS
Sbjct: 915  ASIGS 919

>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)|
            (Fibrinogen receptor A)
          Length = 933

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = +2

Query: 20   SENNS*FSSSKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKP 199
            S ++S   S+  ++PP     S  N  + SNK     +  P  +  SE+  ++SL+WG  
Sbjct: 859  SNSDSESGSNNNVVPPN----SPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLL 914

Query: 200  HSPGS 214
             S GS
Sbjct: 915  ASIGS 919

>UNG_SCHPO (O74834) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 322

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 47  SKYIIPPKWEPLSSTNHQDTSNKRVFLVAIIPYKNLFSEEGVHSSLLWGKPHSP 208
           S+ + PPK +  S ++H      +V L+   PY N+    G+  S+  G P  P
Sbjct: 112 SQRVFPPKEDIYSWSHHTPLHKTKVILLGQDPYHNIGQAHGLCFSVRPGIPCPP 165

>NU4M_DINSE (O79555) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 445

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 172 TLFSSLGQTTLPWI-FMLWLIYLG 240
           TLF  + QTT PW   MLW+  LG
Sbjct: 169 TLFMQMMQTTSPWTELMLWIACLG 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,678,211
Number of Sequences: 219361
Number of extensions: 745375
Number of successful extensions: 2004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)