ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IPPK_RAT (Q5PXE9) Inositol-pentakisphosphate 2-kinase (EC 2.7.1.... 31 1.4
2PI3R6_HUMAN (Q5UE93) Phosphoinositide 3-kinase regulatory subuni... 30 4.1
3SCOT2_HUMAN (Q9BYC2) Succinyl-CoA:3-ketoacid-coenzyme A transfer... 28 9.1
4ARSC_OCEIH (Q8ENQ5) Protein arsC (Arsenate reductase) (EC 1.20.4... 28 9.1
5OXAA_UREPA (Q9PPN7) Membrane protein oxaA 28 9.1
6CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TA... 28 9.1

>IPPK_RAT (Q5PXE9) Inositol-pentakisphosphate 2-kinase (EC 2.7.1.-)|
           (Inositol-1,3,4,5,6-pentakisphosphate 2-kinase)
           (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (rIPK1)
          Length = 489

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 160 VQGGLRFLASPYGRSCRHRPTAVPIHSGSSRHYCTAPHTQQPFSVSPTEVMGRYP*GNQT 339
           +QG     ASP+ RS  H+    P HSG  +  C    T Q   +   ++ G YP  N+ 
Sbjct: 285 LQGARVCEASPFSRSLHHQGKNTPEHSGLPKG-CLLYKTLQVQMLDQLDIEGLYPLYNRV 343

Query: 340 HQ 345
            Q
Sbjct: 344 EQ 345



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>PI3R6_HUMAN (Q5UE93) Phosphoinositide 3-kinase regulatory subunit 6|
           (Phosphoinositide 3-kinase gamma adapter protein of 87
           kDa) (p87 PI3K adapter protein) (p87PIKAP)
          Length = 754

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -2

Query: 325 KDTCPSLQSEILRTVAGCEEPCSSGGKSQSVWGQLSDGGDTSGRRVRPR 179
           KD   + +  +   VA C EPCS   KS++ W  L    +    + +P+
Sbjct: 692 KDDQRTFRDVVRFEVAPCPEPCSGAQKSKAPWLNLHGQQEVEAIKAKPK 740



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>SCOT2_HUMAN (Q9BYC2) Succinyl-CoA:3-ketoacid-coenzyme A transferase 2,|
           mitochondrial precursor (EC 2.8.3.5) (Testis-specific
           succinyl CoA:3-oxoacid CoA-transferase) (SCOT-t)
          Length = 517

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 172 LRFLASPYGRSCRHRPTAVPIHSGSSRHYCTAPHTQQPFSVSPTEVM 312
           LR LAS  GR      + + +  G +R + T+P  +  F   P E++
Sbjct: 4   LRLLASVLGRGVPAGGSGLALSQGCARCFATSPRLRAKFYADPVEMV 50



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>ARSC_OCEIH (Q8ENQ5) Protein arsC (Arsenate reductase) (EC 1.20.4.-) (Arsenical|
           pump modifier) (Low molecular weight
           protein-tyrosine-phosphatase) (EC 3.1.3.48)
          Length = 139

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/47 (27%), Positives = 19/47 (40%)
 Frame = -2

Query: 325 KDTCPSLQSEILRTVAGCEEPCSSGGKSQSVWGQLSDGGDTSGRRVR 185
           KD CP     + R   G E+P  + G  +  W       D  G R++
Sbjct: 86  KDKCPMTPPHVKRDHWGFEDPAKAQGTEEEKWTVFQQVRDKIGDRIK 132



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>OXAA_UREPA (Q9PPN7) Membrane protein oxaA|
          Length = 383

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 459 FLWPQLQVLLHWLIVTTPWSLKLFA 385
           F+WP  Q+LLH++  T  W   L A
Sbjct: 124 FVWPIAQILLHFMYATRDWPAGLNA 148



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>CD81_MOUSE (P35762) CD81 antigen (26 kDa cell surface protein TAPA-1) (Target|
           of the antiproliferative antibody 1)
          Length = 236

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 186 GQESETTLNSALVRRLLCKSGNNLFCIL*QQ 94
           G  + TTL + ++R  LC SG N+   L QQ
Sbjct: 158 GSNALTTLTTTILRNTLCPSGGNILTPLLQQ 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,885,706
Number of Sequences: 219361
Number of extensions: 1366558
Number of successful extensions: 3245
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3241
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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