>STRAP_MOUSE (Q9Z1Z2) Serine-threonine kinase receptor-associated protein|
           (UNR-interacting protein)
          Length = 351

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
 Frame = -3

Query: 479 SGSEDGTIRIWQLSPTNTEA-------EEAADTNGKPKAGVEEIACKIEGFHIAKEEKAE 321
           SGSEDGT+R+WQ     T         EE +    KPK G  E          A+EE AE
Sbjct: 282 SGSEDGTLRLWQTVVGKTYGLWKCVLPEEDSGELAKPKIGFPE---------TAEEELAE 332

Query: 320 E 318
           E
Sbjct: 333 E 333

>RPGF6_HUMAN (Q8TEU7) Rap guanine nucleotide exchange factor 6 (PDZ|
           domain-containing guanine nucleotide exchange factor 2)
           (PDZ-GEF2) (RA-GEF-2)
          Length = 1601

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 293 GVVVVKGALYALPCVSSSKAGVRRRCGWLVTAPWENLALQRANAG-DFFVHRE 138
           G V+VKG++   PC    + G +R C  LV  P E + ++ A    D  + RE
Sbjct: 80  GSVLVKGSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVENAKDNEDSILQRE 132

>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 32/104 (30%), Positives = 39/104 (37%), Gaps = 8/104 (7%)
 Frame = -2

Query: 417 GGSRYKR*TQGWSRGDCM*DRRLPHCQGGEGRGVGLHGWPRW-----CCCRQRCSLRLAL 253
           GGS+  R + G S+GDC        C G +G G G  G  +      CCC   C      
Sbjct: 54  GGSKGGRGSCGGSKGDC------GSCGGSKG-GCGSCGCSQCSCYKPCCCSSGCGSSCC- 105

Query: 252 RLFVQSRCPTQVWLACNCTVGKSCPS---TSKCWGFFCTPRISQ 130
               QS C        +C    SC S   +S C    C P  SQ
Sbjct: 106 ----QSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQ 145

>STRAP_HUMAN (Q9Y3F4) Serine-threonine kinase receptor-associated protein|
           (UNR-interacting protein) (WD-40 repeat protein PT-WD)
           (MAP activator with WD repeats)
          Length = 350

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
 Frame = -3

Query: 479 SGSEDGTIRIWQLSPTNTEA-------EEAADTNGKPKAGVEE 372
           SGSEDGT+R+WQ     T         EE +    KPK G  E
Sbjct: 282 SGSEDGTLRLWQTVVGKTYGLWKCVLPEEDSGELAKPKIGFPE 324

>CDX2_MOUSE (P43241) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)|
          Length = 311

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = +2

Query: 233 RLWTKRRKAR----RKEHL*RQQHHLGQPCNPTPLPSPPWQCGSLRS 361
           ++W + R+A+    +K+   +QQ    QP  P P PS P Q G+LRS
Sbjct: 230 KIWFQNRRAKERKIKKKQQQQQQQQQQQPPQPPPQPSQP-QPGALRS 275

>LPXB_WIGBR (Q8D2H4) Lipid-A-disaccharide synthase (EC 2.4.1.182)|
          Length = 385

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 108 SSTKYSTLGLFSVYKKIPSICSLKGKIFPRCSY 206
           S  + S +G+F +  +IP I +++ KIF R S+
Sbjct: 54  SIEELSIMGIFEIINRIPKILNIRNKIFNRLSF 86

>PTTG1_PIG (Q9BDP6) Securin (Pituitary tumor-transforming protein 1)|
           (Fragment)
          Length = 121

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 185 DFPTVQLQASHTCVGHRLWTKRRKARRKEHL*RQQHHLGQPCNPTPLPSPPWQCGSLRS 361
           DF +  L   H      L        R+E    Q  HLG P +P  +PSPPW+   L+S
Sbjct: 56  DFESFDLPEEHQIAHLPLNGVPLMVLREERELEQLLHLGPP-SPLNMPSPPWESDVLQS 113

>YMZ2_YEAST (Q03177) Hypothetical 94.3 kDa Trp-Asp repeats-containing protein|
           in SNZ1-YPK2 intergenic region
          Length = 834

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -3

Query: 479 SGSEDGTIRIWQL--SPT-NTEAEEAADTNGKPKAGVEEIACKIEGFHIAKEEK 327
           +GS+DG IRIW++  SP    E + +A++N + +A    I  ++   +  KE++
Sbjct: 190 TGSKDGKIRIWKVIGSPVERAELDSSAESNKEARAKSMRIKQQVSSLNNPKEKQ 243

>HSH2D_MOUSE (Q6VYH9) Hematopoietic SH2 domain-containing protein (Hematopoietic|
           SH2 protein) (Adaptor in lymphocytes of unknown function
           X)
          Length = 334

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 208 SQPHLRRTPALDEETQGKA*RAPLTTTTPSRPAM*SYSSAFSSLAMWKPSILHAISSTPA 387
           S+     T +L    + +A R    T   SRPA  S+  AFS +  W+  ++ A+S+   
Sbjct: 253 SEDSCAATTSLQNPAEPQALRGREATFRDSRPA--SWRKAFSGVKAWRGKVVRALSAQEP 310

Query: 388 LGLP 399
           +  P
Sbjct: 311 VDFP 314

>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 479 SGSEDGTIRIWQLSPTNTEAEEAADTNGKPKAGVE 375
           SGS D T RIW +S  NT + +    +   K G E
Sbjct: 372 SGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAE 406

>SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodeling factor|
           snf22 (EC 3.6.1.-) (ATP-dependent helicase snf22)
          Length = 1680

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
 Frame = +1

Query: 106 PHPQNILLL---AYSRCTKKSPAFAR*RARFSHGAVTSQPHLRRTPALDEETQGKA*RAP 276
           P P N+  +    Y + +  SPA    R      A + QP   R+P++D  T   A   P
Sbjct: 343 PQPSNLDAINAKTYFQSSSNSPAPYVYRNNLPPSATSFQPSSSRSPSVDPNTVKSAQHIP 402

Query: 277 LTTTTPSRPAM*SYSSAFSSLAMWKPSILHA 369
             + +PS  A+ + S   S+       + HA
Sbjct: 403 RMSPSPSASALKTQSHVPSAKVPPTSKLNHA 433

>NAPA_PSEST (Q3HS05) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 834

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/72 (23%), Positives = 34/72 (47%)
 Frame = +2

Query: 44  GGTKMYQHKYTMPSQSNPDQHLIHKIFYSWLILGVQKNPQHLLVEGQDFPTVQLQASHTC 223
           G  K+Y  + T   Q+ P+  ++ +I   W      +NP+  ++    +PTV  QA+   
Sbjct: 474 GVLKVYWTQVTNNMQAGPN--VMQEILPGW------RNPETFVIVSDVYPTVSAQAADLI 525

Query: 224 VGHRLWTKRRKA 259
           +   +W ++  A
Sbjct: 526 LPSAMWVEKEGA 537

>NAPA_SHEON (Q8EIJ1) Periplasmic nitrate reductase precursor (EC 1.7.99.4)|
          Length = 826

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +2

Query: 152 KNPQHLLVEGQDFPTVQLQASHTCVGHRLWTKRR----KARRKEHL*RQQ 289
           +NP++ +V    +PTV   A+   +   +W ++      A R+ H+  QQ
Sbjct: 498 RNPENFIVVSDPYPTVTAMAADLILPTAMWVEKEGAYGNAERRTHMWHQQ 547

>HIRL_SCHPO (P87314) Histone transcription regulator 1 homolog|
          Length = 932

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 479 SGSEDGTIRIWQLSPTNTEAEEAADTNGKPK 387
           +G  DGTIRIW     N E E   +    PK
Sbjct: 35  TGGLDGTIRIWSTEAINRENENENENEDLPK 65

>TAOK2_HUMAN (Q9UL54) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2) (Prostate-derived
            STE20-like kinase 1) (PSK-1) (Kinase from chicken homolog
            C) (hKFC-C)
          Length = 1235

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 21/61 (34%), Positives = 22/61 (36%)
 Frame = +2

Query: 209  ASHTCVGHRLWTKRRKARRKEHL*RQQHHLGQPCNPTPLPSPPWQCGSLRSYMQSPLLQP 388
            A HT     L    R  R    L R Q  LG P +  PLP      G      QS  L P
Sbjct: 1176 AIHTLASWGLLRGERPTRIPRLLPRSQRQLGPPASHQPLPGT--LAGRRSRTRQSRALPP 1233

Query: 389  W 391
            W
Sbjct: 1234 W 1234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,530,521
Number of Sequences: 219361
Number of extensions: 1743560
Number of successful extensions: 6081
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6073
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)