ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
2dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
3dbj|AK111547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
4dbj|AK100386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
5gb|AY105430.1| Zea mays PCO119892 mRNA sequence 54 4e-04
6gb|AY107089.1| Zea mays PCO119890 mRNA sequence 48 0.027
7gb|AC117262.2| Mus musculus BAC clone RP24-537M7 from 2, complet... 46 0.11
8gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence 46 0.11
9emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chro... 46 0.11
10ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple my... 44 0.42
11gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosom... 44 0.42
12emb|BX934891.1| Gallus gallus finished cDNA, clone ChEST153l23 44 0.42
13emb|BX932550.1| Gallus gallus finished cDNA, clone ChEST637c11 44 0.42
14gb|BT016143.1| Drosophila melanogaster AT25839 full insert cDNA 42 1.6
15gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome... 42 1.6
16gb|AC146045.3| Pan troglodytes BAC clone RP43-14B22 from 7, comp... 42 1.6
17emb|AL592221.6| Human DNA sequence from clone RP11-216F5 on chro... 42 1.6
18emb|AL160287.18| Human DNA sequence from clone RP11-128B16 on ch... 42 1.6
19ref|NM_165630.1| Drosophila melanogaster sec31 CG8266-RB, transc... 42 1.6
20ref|NM_136570.2| Drosophila melanogaster sec31 CG8266-RA, transc... 42 1.6
21gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosom... 42 1.6
22gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, r... 42 1.6
23gb|AC084515.1|CBRG17N15 Caenorhabditis briggsae cosmid G17N15, c... 42 1.6
24gb|AC003668.2| Homo sapiens X PAC RP1-233D13 (Roswell Park Cance... 42 1.6
25gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G... 42 1.6
26gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15... 42 1.6
27emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chr... 42 1.6
28gb|AC123059.3| Mus musculus BAC clone RP23-188K16 from 15, compl... 42 1.6
29ref|XM_483174.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
30ref|XM_471592.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
31gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, co... 40 6.5
32gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, comp... 40 6.5
33gb|BC082429.1| Xenopus laevis cDNA clone MGC:83347 IMAGE:6865319... 40 6.5
34gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, comp... 40 6.5
35gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, c... 40 6.5
36gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.5
37gb|AY586402.1| Anaplasma centrale major surface protein 3 (msp3)... 40 6.5
38ref|XM_857631.1| PREDICTED: Canis familiaris hypothetical protei... 40 6.5
39ref|XM_977932.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
40ref|XM_977992.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
41ref|XM_897631.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
42ref|XM_887737.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
43ref|XM_923155.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
44ref|XM_989876.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 g... 40 6.5
45gb|DQ483804.1| Gymnogyps californianus clone 227F microsatellite... 40 6.5
46gb|DQ483787.1| Gymnogyps californianus clone 210F microsatellite... 40 6.5
47gb|DQ483584.1| Gymnogyps californianus clone 7F microsatellite s... 40 6.5
48gb|DQ483580.1| Gymnogyps californianus clone 3F microsatellite s... 40 6.5
49gb|DQ483560.1| Gymnogyps californianus clone 119D microsatellite... 40 6.5
50gb|DQ483549.1| Gymnogyps californianus clone 108D microsatellite... 40 6.5
51gb|DQ484036.1| Gymnogyps californianus clone 202G microsatellite... 40 6.5
52gb|DQ484008.1| Gymnogyps californianus clone 174G microsatellite... 40 6.5
53gb|DQ483993.1| Gymnogyps californianus clone 159G microsatellite... 40 6.5
54gb|DQ483989.1| Gymnogyps californianus clone 155G microsatellite... 40 6.5
55gb|DQ483969.1| Gymnogyps californianus clone 135G microsatellite... 40 6.5
56gb|DQ483845.1| Gymnogyps californianus clone 11G microsatellite ... 40 6.5
57gb|DQ483440.1| Gymnogyps californianus clone 143H microsatellite... 40 6.5
58gb|DQ483415.1| Gymnogyps californianus clone 118H microsatellite... 40 6.5
59ref|XM_842835.1| Leishmania major strain Friedlin hypothetical p... 40 6.5
60gb|AF458766.1| Oryza sativa LTR retrotransposon Osr38-1, complet... 40 6.5
61ref|XM_748371.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.5
62gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome... 40 6.5
63gb|AC110818.5| Mus musculus BAC clone RP23-198H8 from 16, comple... 40 6.5
64ref|NM_001008054.1| Xenopus tropicalis utrn protein (utrn), mRNA 40 6.5
65gb|BC080941.1| Xenopus tropicalis utrn protein, mRNA (cDNA clone... 40 6.5
66gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's ... 40 6.5
67ref|XM_967826.1| PREDICTED: Tribolium castaneum similar to CG866... 40 6.5
68emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
69emb|AJ311625.1|DRE311625 Danio rerio vlg gene for vasa-like prot... 40 6.5
70gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, comp... 40 6.5
71dbj|AK144976.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 6.5
72dbj|AK087060.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 6.5
73dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
74dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
75dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
76gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta... 40 6.5
77gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, comp... 40 6.5
78dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
79dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
80dbj|AK120828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
81gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 ... 40 6.5
82emb|CR848277.2| Xenopus tropicalis finished cDNA, clone TNeu143c03 40 6.5
83gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome... 40 6.5
84gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, c... 40 6.5
85gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, comple... 40 6.5 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 120/150 (80%)
 Strand = Plus / Plus

                                                                            
Query: 330      ctcctccttggcaatgtggaagccttcgatcttacatgcaatctcctctactccagcctt 389
                ||||||||||| ||||||||||||||||||||| | ||||| ||| | ||| ||| |  |
Sbjct: 23229987 ctcctccttgggaatgtggaagccttcgatcttgcgtgcaacctcatttaccccaactgt 23230046

                                                                            
Query: 390      gggtttaccgtttgtatcggctgcctcctcggcctctgtgttagttgggctcagctgcca 449
                 ||||| || |||| || | | ||||| | | | || | ||||| |||||||||||||||
Sbjct: 23230047 tggtttgccatttgaattgaccgcctcattgtcatcagcgttaggtgggctcagctgcca 23230106

                                              
Query: 450      gatcctaatagtaccatcttccgaccctga 479
                |||||  || || |||||||| || |||||
Sbjct: 23230107 gatccggatggtgccatcttctgatcctga 23230136
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>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 120/150 (80%)
 Strand = Plus / Plus

                                                                         
Query: 330   ctcctccttggcaatgtggaagccttcgatcttacatgcaatctcctctactccagcctt 389
             ||||||||||| ||||||||||||||||||||| | ||||| ||| | ||| ||| |  |
Sbjct: 64749 ctcctccttgggaatgtggaagccttcgatcttgcgtgcaacctcatttaccccaactgt 64808

                                                                         
Query: 390   gggtttaccgtttgtatcggctgcctcctcggcctctgtgttagttgggctcagctgcca 449
              ||||| || |||| || | | ||||| | | | || | ||||| |||||||||||||||
Sbjct: 64809 tggtttgccatttgaattgaccgcctcattgtcatcagcgttaggtgggctcagctgcca 64868

                                           
Query: 450   gatcctaatagtaccatcttccgaccctga 479
             |||||  || || |||||||| || |||||
Sbjct: 64869 gatccggatggtgccatcttctgatcctga 64898
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>dbj|AK111547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D16, full
            insert sequence
          Length = 1840

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                        
Query: 330  ctcctccttggcaatgtggaagccttcgatcttacatgcaatctcctctactccagcctt 389
            ||||||||||| ||||||||||||||||||||| | ||||| ||| | ||| ||| |  |
Sbjct: 1435 ctcctccttgggaatgtggaagccttcgatcttgcgtgcaacctcatttaccccaactgt 1376

                                                                        
Query: 390  gggtttaccgtttgtatcggctgcctcctcggcctctgtgttagttgggctcagctgcca 449
             ||||| || |||| || | | ||||| | | | || | ||||| |||||||||||||||
Sbjct: 1375 tggtttgccatttgaattgaccgcctcattgtcatcagcgttaggtgggctcagctgcca 1316

                                          
Query: 450  gatcctaatagtaccatcttccgaccctga 479
            |||||  || || |||||||| || |||||
Sbjct: 1315 gatccggatggtgccatcttctgatcctga 1286
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>dbj|AK100386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085I20, full
            insert sequence
          Length = 1806

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 120/150 (80%)
 Strand = Plus / Minus

                                                                        
Query: 330  ctcctccttggcaatgtggaagccttcgatcttacatgcaatctcctctactccagcctt 389
            ||||||||||| ||||||||||||||||||||| | ||||| ||| | ||| ||| |  |
Sbjct: 1364 ctcctccttgggaatgtggaagccttcgatcttgcgtgcaacctcatttaccccaactgt 1305

                                                                        
Query: 390  gggtttaccgtttgtatcggctgcctcctcggcctctgtgttagttgggctcagctgcca 449
             ||||| || |||| || | | ||||| | | | || | ||||| |||||||||||||||
Sbjct: 1304 tggtttgccatttgaattgaccgcctcattgtcatcagcgttaggtgggctcagctgcca 1245

                                          
Query: 450  gatcctaatagtaccatcttccgaccctga 479
            |||||  || || |||||||| || |||||
Sbjct: 1244 gatccggatggtgccatcttctgatcctga 1215
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>gb|AY105430.1| Zea mays PCO119892 mRNA sequence
          Length = 1553

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 332  cctccttggcaatgtggaagccttcgatctt 362
            ||||||||| |||||||||||||||||||||
Sbjct: 1352 cctccttgggaatgtggaagccttcgatctt 1322
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>gb|AY107089.1| Zea mays PCO119890 mRNA sequence
          Length = 944

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 435 tgggctcagctgccagatcctaatagtaccatcttc 470
           |||||| ||||||||||||||||| || ||||||||
Sbjct: 369 tgggctaagctgccagatcctaatggtgccatcttc 334
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>gb|AC117262.2| Mus musculus BAC clone RP24-537M7 from 2, complete sequence
          Length = 156547

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 69    aatacacaatgccatctcaatct 91
             |||||||||||||||||||||||
Sbjct: 21779 aatacacaatgccatctcaatct 21757
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>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence
          Length = 174437

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 186   attttcccacggtgcagttacaagcca 212
             ||||||||| |||||||||||||||||
Sbjct: 25522 attttcccatggtgcagttacaagcca 25496
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>emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chromosome 2, complete
             sequence
          Length = 127220

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 69    aatacacaatgccatctcaatct 91
             |||||||||||||||||||||||
Sbjct: 69677 aatacacaatgccatctcaatct 69699
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>ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple myeloma transforming
           gene 2 (LOC428400), mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 318 ctcctctgccttctcctccttg 339
           ||||||||||||||||||||||
Sbjct: 555 ctcctctgccttctcctccttg 534
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>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence
          Length = 222313

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 434    ttgggctcagctgccagatcct 455
              ||||||||||||||||||||||
Sbjct: 185511 ttgggctcagctgccagatcct 185490
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>emb|BX934891.1| Gallus gallus finished cDNA, clone ChEST153l23
          Length = 622

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 318 ctcctctgccttctcctccttg 339
           ||||||||||||||||||||||
Sbjct: 124 ctcctctgccttctcctccttg 103
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>emb|BX932550.1| Gallus gallus finished cDNA, clone ChEST637c11
          Length = 901

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 318 ctcctctgccttctcctccttg 339
           ||||||||||||||||||||||
Sbjct: 553 ctcctctgccttctcctccttg 532
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>gb|BT016143.1| Drosophila melanogaster AT25839 full insert cDNA
          Length = 4096

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aagccagccacacctgcgtcg 227
           |||||||||||||||||||||
Sbjct: 810 aagccagccacacctgcgtcg 790
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>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence
          Length = 158788

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   ctcctctgccttctcctcctt 338
             |||||||||||||||||||||
Sbjct: 65647 ctcctctgccttctcctcctt 65627
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>gb|AC146045.3| Pan troglodytes BAC clone RP43-14B22 from 7, complete sequence
          Length = 151553

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    tctcaatctaatcctgatcaa 103
             |||||||||||||||||||||
Sbjct: 73084 tctcaatctaatcctgatcaa 73064
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>emb|AL592221.6| Human DNA sequence from clone RP11-216F5 on chromosome 9, complete
              sequence
          Length = 154827

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     tctcaatctaatcctgatcaa 103
              |||||||||||||||||||||
Sbjct: 145647 tctcaatctaatcctgatcaa 145667
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>emb|AL160287.18| Human DNA sequence from clone RP11-128B16 on chromosome 10p11.1-11.23
             Contains the 3' end of the APBB1IP gene for amyloid beta
             (A4) precursor protein-binding family B member 1
             interacting protein and two novel genes, complete sequence
          Length = 144666

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 98    gatcaacacctcatccacaaaatat 122
             ||||||||||||||||||| |||||
Sbjct: 93142 gatcaacacctcatccacagaatat 93118
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>ref|NM_165630.1| Drosophila melanogaster sec31 CG8266-RB, transcript variant B
           (sec31), mRNA
          Length = 4047

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aagccagccacacctgcgtcg 227
           |||||||||||||||||||||
Sbjct: 790 aagccagccacacctgcgtcg 770
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>ref|NM_136570.2| Drosophila melanogaster sec31 CG8266-RA, transcript variant A
           (sec31), mRNA
          Length = 4044

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 aagccagccacacctgcgtcg 227
           |||||||||||||||||||||
Sbjct: 790 aagccagccacacctgcgtcg 770
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>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete
             sequence
          Length = 213367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 313   tcctactcctctgccttctcctcct 337
             |||| ||||||||||||||||||||
Sbjct: 40870 tcctcctcctctgccttctcctcct 40894
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>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone
             BACR02C23, complete sequence
          Length = 168601

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   aagccagccacacctgcgtcg 227
             |||||||||||||||||||||
Sbjct: 87745 aagccagccacacctgcgtcg 87725
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>gb|AC084515.1|CBRG17N15 Caenorhabditis briggsae cosmid G17N15, complete sequence
          Length = 40280

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 318   ctcctctgccttctcctcctt 338
             |||||||||||||||||||||
Sbjct: 25112 ctcctctgccttctcctcctt 25132
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>gb|AC003668.2| Homo sapiens X PAC RP1-233D13 (Roswell Park Cancer Institute Human PAC
             Library ) complete sequence
          Length = 145859

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    tctcaatctaatcctgatcaa 103
             |||||||||||||||||||||
Sbjct: 67135 tctcaatctaatcctgatcaa 67155
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>gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G3 containing neurexin III gene,
              partial cds, complete sequence
          Length = 157871

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 329    tctcctccttggcaatgtgga 349
              |||||||||||||||||||||
Sbjct: 145546 tctcctccttggcaatgtgga 145526
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>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete
              sequence
          Length = 271696

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    aagccagccacacctgcgtcg 227
              |||||||||||||||||||||
Sbjct: 100865 aagccagccacacctgcgtcg 100845
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>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete
             sequence
          Length = 178735

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 313   tcctactcctctgccttctcctcct 337
             |||| ||||||||||||||||||||
Sbjct: 64061 tcctcctcctctgccttctcctcct 64085
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>gb|AC123059.3| Mus musculus BAC clone RP23-188K16 from 15, complete sequence
          Length = 188863

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 313   tcctactcctctgccttctcctcct 337
             |||| ||||||||||||||||||||
Sbjct: 87473 tcctcctcctctgccttctcctcct 87449
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>ref|XM_483174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2805

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 406 tcggctgcctcctcggcctc 425
           ||||||||||||||||||||
Sbjct: 427 tcggctgcctcctcggcctc 446
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>ref|XM_471592.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4245

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cttctcctccttggcaatgt 346
            ||||||||||||||||||||
Sbjct: 3426 cttctcctccttggcaatgt 3407
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>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence
          Length = 218917

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tcctctgccttctcctcctt 338
             ||||||||||||||||||||
Sbjct: 63432 tcctctgccttctcctcctt 63413
to top
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence
          Length = 203655

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tcctctgccttctcctcctt 338
             ||||||||||||||||||||
Sbjct: 50068 tcctctgccttctcctcctt 50087
to top
>gb|BC082429.1| Xenopus laevis cDNA clone MGC:83347 IMAGE:6865319, complete cds
          Length = 2263

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  ctcctctgccttctcctcct 337
            ||||||||||||||||||||
Sbjct: 1486 ctcctctgccttctcctcct 1505
to top
>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence
          Length = 187098

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    aacaaaaatgtatcaacaca 68
             ||||||||||||||||||||
Sbjct: 51083 aacaaaaatgtatcaacaca 51064
to top
>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence
          Length = 188948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   ctcctctgccttctcctcct 337
             ||||||||||||||||||||
Sbjct: 49037 ctcctctgccttctcctcct 49018
to top
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 320     cctctgccttctcctccttg 339
               ||||||||||||||||||||
Sbjct: 1133033 cctctgccttctcctccttg 1133052
to top
>gb|AY586402.1| Anaplasma centrale major surface protein 3 (msp3) gene, partial cds
          Length = 1909

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 ctcctctgccttctcctccttggc 341
           ||||| ||||||||||||||||||
Sbjct: 576 ctcctttgccttctcctccttggc 553
to top
>ref|XM_857631.1| PREDICTED: Canis familiaris hypothetical protein LOC608731
           (LOC608731), mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 588 ctcctctgccttctcctcct 569
to top
>ref|XM_977932.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 1 (4631416L12Rik), mRNA
          Length = 3059

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1929 ctcctctgccttctgctccttggc 1906
to top
>ref|XM_977992.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 2 (4631416L12Rik), mRNA
          Length = 4721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1445 ctcctctgccttctgctccttggc 1422
to top
>ref|XM_897631.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 2 (4631416L12Rik), mRNA
          Length = 3059

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1929 ctcctctgccttctgctccttggc 1906
to top
>ref|XM_887737.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 1 (4631416L12Rik), mRNA
          Length = 5205

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1929 ctcctctgccttctgctccttggc 1906
to top
>ref|XM_923155.2| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 2 (4631416L12Rik), mRNA
          Length = 3059

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1929 ctcctctgccttctgctccttggc 1906
to top
>ref|XM_989876.1| PREDICTED: Mus musculus RIKEN cDNA 4631416L12 gene, transcript
            variant 5 (4631416L12Rik), mRNA
          Length = 4721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1445 ctcctctgccttctgctccttggc 1422
to top
>gb|DQ483804.1| Gymnogyps californianus clone 227F microsatellite sequence
          Length = 580

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 226 ctcctctgccttctcctcct 207
to top
>gb|DQ483787.1| Gymnogyps californianus clone 210F microsatellite sequence
          Length = 536

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 200 ctcctctgccttctcctcct 181
to top
>gb|DQ483584.1| Gymnogyps californianus clone 7F microsatellite sequence
          Length = 620

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 206 ctcctctgccttctcctcct 187
to top
>gb|DQ483580.1| Gymnogyps californianus clone 3F microsatellite sequence
          Length = 456

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 223 ctcctctgccttctcctcct 204
to top
>gb|DQ483560.1| Gymnogyps californianus clone 119D microsatellite sequence
          Length = 560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 335 ctcctctgccttctcctcct 354
to top
>gb|DQ483549.1| Gymnogyps californianus clone 108D microsatellite sequence
          Length = 535

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 204 ctcctctgccttctcctcct 185
to top
>gb|DQ484036.1| Gymnogyps californianus clone 202G microsatellite sequence
          Length = 1544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 801 ctcctctgccttctcctcct 820
to top
>gb|DQ484008.1| Gymnogyps californianus clone 174G microsatellite sequence
          Length = 561

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 335 ctcctctgccttctcctcct 354
to top
>gb|DQ483993.1| Gymnogyps californianus clone 159G microsatellite sequence
          Length = 541

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 216 ctcctctgccttctcctcct 197
to top
>gb|DQ483989.1| Gymnogyps californianus clone 155G microsatellite sequence
          Length = 593

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 337 ctcctctgccttctcctcct 356
to top
>gb|DQ483969.1| Gymnogyps californianus clone 135G microsatellite sequence
          Length = 511

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 306 ctcctctgccttctcctcct 325
to top
>gb|DQ483845.1| Gymnogyps californianus clone 11G microsatellite sequence
          Length = 653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 284 ctcctctgccttctcctcct 265
to top
>gb|DQ483440.1| Gymnogyps californianus clone 143H microsatellite sequence
          Length = 1700

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 889 ctcctctgccttctcctcct 908
to top
>gb|DQ483415.1| Gymnogyps californianus clone 118H microsatellite sequence
          Length = 541

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 335 ctcctctgccttctcctcct 354
to top
>ref|XM_842835.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0906)
            partial mRNA
          Length = 3699

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  cctctgccttctcctccttg 339
            ||||||||||||||||||||
Sbjct: 2021 cctctgccttctcctccttg 2040
to top
>gb|AF458766.1| Oryza sativa LTR retrotransposon Osr38-1, complete sequence
          Length = 5585

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cttctcctccttggcaatgt 346
            ||||||||||||||||||||
Sbjct: 5278 cttctcctccttggcaatgt 5259



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 cttctcctccttggcaatgt 346
           ||||||||||||||||||||
Sbjct: 79  cttctcctccttggcaatgt 60
to top
>ref|XM_748371.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g11870) partial
            mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  ctcctctgccttctcctcct 337
            ||||||||||||||||||||
Sbjct: 2235 ctcctctgccttctcctcct 2216
to top
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence
          Length = 205173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 313   tcctactcctctgccttctcctcc 336
             |||| |||||||||||||||||||
Sbjct: 30535 tcctcctcctctgccttctcctcc 30512
to top
>gb|AC110818.5| Mus musculus BAC clone RP23-198H8 from 16, complete sequence
          Length = 182807

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    aatacacaatgccatctcaatcta 92
             ||||||| ||||||||||||||||
Sbjct: 39852 aatacaccatgccatctcaatcta 39875
to top
>ref|NM_001008054.1| Xenopus tropicalis utrn protein (utrn), mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  ctcctctgccttctcctcct 337
            ||||||||||||||||||||
Sbjct: 1573 ctcctctgccttctcctcct 1592
to top
>gb|BC080941.1| Xenopus tropicalis utrn protein, mRNA (cDNA clone MGC:79631
            IMAGE:6979993), complete cds
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  ctcctctgccttctcctcct 337
            ||||||||||||||||||||
Sbjct: 1573 ctcctctgccttctcctcct 1592
to top
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 221805

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ctcctctgccttctcctcct 337
             ||||||||||||||||||||
Sbjct: 30218 ctcctctgccttctcctcct 30237
to top
>ref|XM_967826.1| PREDICTED: Tribolium castaneum similar to CG8663-PA, isoform A
           (LOC661678), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 tctcctccttggcaatgtgg 348
           ||||||||||||||||||||
Sbjct: 661 tctcctccttggcaatgtgg 642
to top
>emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065J03,
             complete sequence
          Length = 144146

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cttctcctccttggcaatgt 346
             ||||||||||||||||||||
Sbjct: 52434 cttctcctccttggcaatgt 52415



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cttctcctccttggcaatgt 346
             ||||||||||||||||||||
Sbjct: 47233 cttctcctccttggcaatgt 47214
to top
>emb|AJ311625.1|DRE311625 Danio rerio vlg gene for vasa-like protein, exons 1-27
          Length = 24440

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tcctctgccttctcctcctt 338
             ||||||||||||||||||||
Sbjct: 13162 tcctctgccttctcctcctt 13143
to top
>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence
          Length = 202933

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    ctcctctgccttctcctccttggc 341
              ||||||| ||||||||||||||||
Sbjct: 118374 ctcctcttccttctcctccttggc 118351
to top
>dbj|AK144976.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830016O15 product:Putative SH3
            domain-containing guanine exchange factor SGEF homolog
            [Homo sapiens], full insert sequence
          Length = 4621

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1435 ctcctctgccttctgctccttggc 1412
to top
>dbj|AK087060.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030024E19 product:weakly similar to
            PUTATIVE SH3 DOMAIN-CONTAINING GUANINE EXCHANGE FACTOR
            SGEF [Homo sapiens], full insert sequence
          Length = 2309

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 318  ctcctctgccttctcctccttggc 341
            |||||||||||||| |||||||||
Sbjct: 1709 ctcctctgccttctgctccttggc 1686
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      cttctcctccttggcaatgt 346
                ||||||||||||||||||||
Sbjct: 12546992 cttctcctccttggcaatgt 12547011



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      cttctcctccttggcaatgt 346
                ||||||||||||||||||||
Sbjct: 12541791 cttctcctccttggcaatgt 12541810
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 406      tcggctgcctcctcggcctc 425
                ||||||||||||||||||||
Sbjct: 24632193 tcggctgcctcctcggcctc 24632212
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     aatctaatcctgatcaacacctca 110
              |||||||||||||| |||||||||
Sbjct: 640639 aatctaatcctgattaacacctca 640616
to top
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA,
           complete cds
          Length = 2625

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 ctcctctgccttctcctcct 337
           ||||||||||||||||||||
Sbjct: 787 ctcctctgccttctcctcct 768
to top
>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence
          Length = 120139

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ccttggcaatgtggaagcct 354
             ||||||||||||||||||||
Sbjct: 60050 ccttggcaatgtggaagcct 60069
to top
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1118_A06
          Length = 92836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  tcggctgcctcctcggcctc 425
            ||||||||||||||||||||
Sbjct: 4497 tcggctgcctcctcggcctc 4516
to top
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     aatctaatcctgatcaacacctca 110
              |||||||||||||| |||||||||
Sbjct: 118692 aatctaatcctgattaacacctca 118669
to top
>dbj|AK120828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019F02, full
           insert sequence
          Length = 2805

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 406 tcggctgcctcctcggcctc 425
           ||||||||||||||||||||
Sbjct: 427 tcggctgcctcctcggcctc 446
to top
>gb|AC005699.9|AC005699 Homo sapiens chromosome 4 clone C0473M13 map 4p16, complete sequence
          Length = 191904

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 315   ctactcctctgccttctcctcctt 338
             |||||||||||||||||| |||||
Sbjct: 97483 ctactcctctgccttctcttcctt 97506
to top
>emb|CR848277.2| Xenopus tropicalis finished cDNA, clone TNeu143c03
          Length = 2368

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  ctcctctgccttctcctcct 337
            ||||||||||||||||||||
Sbjct: 1487 ctcctctgccttctcctcct 1506
to top
>gb|AC122883.5| Mus musculus BAC clone RP23-83N21 from chromosome 3, complete sequence
          Length = 230573

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    ctcctctgccttctcctccttggc 341
              |||||||||||||| |||||||||
Sbjct: 196886 ctcctctgccttctgctccttggc 196863
to top
>gb|AC102009.20| Mus musculus chromosome 10, clone RP24-512D20, complete sequence
          Length = 172721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    ctcctctgccttctcctcct 337
              ||||||||||||||||||||
Sbjct: 106748 ctcctctgccttctcctcct 106729
to top
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence
          Length = 221931

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 313  tcctactcctctgccttctcctcc 336
            |||| |||||||||||||||||||
Sbjct: 4680 tcctcctcctctgccttctcctcc 4703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,243,546
Number of Sequences: 3902068
Number of extensions: 4243546
Number of successful extensions: 84440
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84217
Number of HSP's gapped (non-prelim): 223
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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