Clone Name | rbart15h09 |
---|---|
Clone Library Name | barley_pub |
>gb|AY620417.1| Oryza sativa (japonica cultivar-group) clone P0705D01 GTP-binding protein (GBP) mRNA, complete cds Length = 1086 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 639 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 580 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 579 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 520 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 519 taccggtggtg 509
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 8413268 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 8413327 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 8413328 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 8413387 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 8413388 taccggtggtg 8413398 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 13271022 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 13270963 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 13270962 tgcacatgaacacttcgaggggccg 13270938
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 28223 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 28282 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 28283 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 28342 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 28343 taccggtggtg 28353
>dbj|AK119548.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C09, full insert sequence Length = 1035 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 672 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 613 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 612 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 553 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 552 taccggtggtg 542
>dbj|AK111979.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-G03, full insert sequence Length = 1035 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 693 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 634 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 633 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 574 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 573 taccggtggtg 563
>dbj|AK111904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112F13, full insert sequence Length = 1049 Score = 133 bits (67), Expect = 6e-28 Identities = 115/131 (87%) Strand = Plus / Minus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 697 ctcatttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacga 638 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 |||||||||||| | |||||| ||||||||||| || || | | |||||||||||||| Sbjct: 637 cgctgcacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgccct 578 Query: 450 tcccagtggtg 460 | || |||||| Sbjct: 577 taccggtggtg 567
>ref|NM_187884.1| Oryza sativa (japonica cultivar-group), Ozsa8326 predicted mRNA Length = 582 Score = 131 bits (66), Expect = 2e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||| Sbjct: 578 ttgatgtactgggacatccatttgaagccttcgccgtagcccatcttgcggacgacgctg 519 Query: 395 cacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgcccttccca 454 |||||||| | |||||| ||||||||||| || || | | ||||||||||||||| || Sbjct: 518 cacatgaagatctccagaggccgcacgttggagtcggctaggttcacgttgcccttaccg 459 Query: 455 gtggtg 460 |||||| Sbjct: 458 gtggtg 453
>gb|AY106333.1| Zea mays PCO096720 mRNA sequence Length = 1098 Score = 127 bits (64), Expect = 3e-26 Identities = 109/124 (87%) Strand = Plus / Minus Query: 330 ctcacttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacga 389 |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || | Sbjct: 771 ctcacttgatgtactgagacatccatttgaagccttcgccatagcccatcttgcgcacca 712 Query: 390 tgctgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgccct 449 ||||||||||| | ||||||||| || ||||| || || | ||||||||||||||||| Sbjct: 711 cactgcacatgaagatctccagggggcggacgttggagtcggccaagttcacgttgccct 652 Query: 450 tccc 453 |||| Sbjct: 651 tccc 648
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 117 bits (59), Expect = 3e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 22973677 acttgatgtactgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 22973736 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 22973737 tgcacatgaacacctccagggggcgaacgtt 22973767
>dbj|AK099125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044P12, full insert sequence Length = 927 Score = 117 bits (59), Expect = 3e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 706 acttgatgtactgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 647 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 646 tgcacatgaacacctccagggggcgaacgtt 616
>dbj|AK060332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B07, full insert sequence Length = 952 Score = 117 bits (59), Expect = 3e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 709 acttgatgtactgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 650 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 649 tgcacatgaacacctccagggggcgaacgtt 619
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 117 bits (59), Expect = 3e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 22901868 acttgatgtactgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 22901927 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 22901928 tgcacatgaacacctccagggggcgaacgtt 22901958
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 117 bits (59), Expect = 3e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 82954 acttgatgtactgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 83013 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 83014 tgcacatgaacacctccagggggcgaacgtt 83044
>gb|AY596178.1| Zea mays putative ras-like small GTP binding ptotein mRNA, complete cds Length = 945 Score = 113 bits (57), Expect = 5e-22 Identities = 105/121 (86%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| || | | Sbjct: 650 acttgatgtactgagacatccatttgaagccttcgccatagcccatcttgcgcaccacac 591 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccgacaagttcacgttgcccttcc 452 |||||||||| | || ||||||||| || || || || | |||||||||||||||||||| Sbjct: 590 tgcacatgaagatcttcaggggccggacattggagtcggccaagttcacgttgcccttcc 531 Query: 453 c 453 | Sbjct: 530 c 530
>dbj|AK099149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063C05, full insert sequence Length = 934 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||| | |||| ||| ||||| || || ||||||||||||||||||||||||| Sbjct: 709 acttgatgtaccgtgacacccacttgaacccatccccatagcccatcttgcggacgatgc 650 Query: 393 tgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||||| || ||||| Sbjct: 649 tgcacatgaacacctccagggggcgaacgtt 619
>gb|AF210431.1| Nicotiana tabacum small GTP-binding protein Sar1BNt mRNA, complete cds Length = 582 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| ||||||||| |||| ||||||||||| ||||| |||||||| |||| Sbjct: 580 acttgatatactgagacatccatctgaagccttctccatatcccattttgcggactatgc 521 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 520 tgcacatgaatacctc 505
>gb|DQ200377.1| Solanum tuberosum clone 061D05 small GTP-binding protein Sar1BNt-like protein mRNA, complete cds Length = 882 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||| |||| ||||| ||||| ||||| |||||||| |||| Sbjct: 685 acttgatgtactgagacatccacctgaagccttccccataacccattttgcggactatgc 626 Query: 393 tgcacatgaacacctc 408 |||||||||||||||| Sbjct: 625 tgcacatgaacacctc 610
>gb|U55035.1|BCU55035 Brassica campestris small GTP-binding protein Bsar1a (bsar1a) mRNA, complete cds Length = 857 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| || | ||||||||| ||||| ||||| |||||||| | |||||||| Sbjct: 644 acttgatgtactgagagagccatttgaagccttcgccataacccatcttcctgacgatgc 585 Query: 393 tgcacatgaacacctcca 410 |||||||||| ||||||| Sbjct: 584 tgcacatgaaaacctcca 567
>ref|NM_183916.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 580 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 521 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 520 tgcacatgaacacttcgaggggccg 496
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 11380 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 11321 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 11320 tgcacatgaacacttcgaggggccg 11296
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 143323 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 143264 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 143263 tgcacatgaacacttcgaggggccg 143239
>dbj|AK112012.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H07, full insert sequence Length = 1094 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 793 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 734 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 733 tgcacatgaacacttcgaggggccg 709
>dbj|AK103351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126I16, full insert sequence Length = 1152 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| ||||| || || |||||||||||||||||||| | | Sbjct: 934 acttgatgtactgggagacccacttgaacccgtcaccatagcccatcttgcggacaacac 875 Query: 393 tgcacatgaacacctccaggggccg 417 ||||||||||||| || |||||||| Sbjct: 874 tgcacatgaacacttcgaggggccg 850
>emb|X97967.1|NTSAR1 N.tabacum mRNA for GTP-binding protein, SAR1 Length = 1065 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| ||||||||| |||| ||||||||||| ||||| | |||||| |||| Sbjct: 780 acttgatatactgagacatccatctgaagccttctccatatcccatttggcggactatgc 721 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 720 tgcacatgaatacctc 705
>gb|L12051.1|TOMGTPASE Lycopersicon esculentum Mill. GTPase (SAR2) mRNA, complete cds Length = 957 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || |||||||| |||||||| || ||||| ||||||||||| || |||| Sbjct: 697 acttgatgtattgcgacatccacttgaaaccctcaccatatcccatcttgcgcacaatgc 638 Query: 393 tgcacatgaacacctc 408 ||||||| |||||||| Sbjct: 637 tgcacataaacacctc 622
>gb|AF084005.1|AF084005 Avena fatua ras-like small monomeric GTP-binding protein (SAR1) mRNA, complete cds Length = 801 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 |||||||||||||| | ||| ||||| || || |||||||||||||||||||| | ||| Sbjct: 741 ttgatgtactgggagacccacttgaacccatcaccatagcccatcttgcggacaacactg 682 Query: 395 cacatgaacacctccaggggccg 417 |||||||||||||| || ||||| Sbjct: 681 cacatgaacacctcaagaggccg 659
>ref|NM_100788.3| Arabidopsis thaliana ATSAR1/ATSARA1A; GTP binding AT1G09180 (ATSAR1/ATSARA1A) mRNA, complete cds Length = 737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| || | |||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 704 acttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacgatgc 645 Query: 393 tgcacatgaacacctccagggg 414 |||||||||| ||||| ||||| Sbjct: 644 tgcacatgaagacctcaagggg 623
>gb|AY090921.1| Arabidopsis thaliana putative GTP-binding protein, SAR1B (At1g09180) mRNA, complete cds Length = 613 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| || | |||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 580 acttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacgatgc 521 Query: 393 tgcacatgaacacctccagggg 414 |||||||||| ||||| ||||| Sbjct: 520 tgcacatgaagacctcaagggg 499
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| || | |||||| ||||| || ||||| ||||| ||||||||||||| Sbjct: 36310 acttgatatactgagatagccatttaaaaccctcgccataacccattttgcggacgatgc 36369 Query: 393 tgcacatgaacacctccagggg 414 |||||||||| ||||| ||||| Sbjct: 36370 tgcacatgaagacctcaagggg 36391
>gb|DQ235187.1| Solanum tuberosum clone 164C03 GTPase-like mRNA, complete cds Length = 957 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || |||||||||||||| || || ||||| ||||||||||| || |||| Sbjct: 687 acttgatgtattgcgacatccatttgaagccctcaccatatcccatcttgcgcacaatgc 628 Query: 393 tgcacatgaacacctc 408 | ||||| |||||||| Sbjct: 627 tacacataaacacctc 612
>ref|NM_116440.2| Arabidopsis thaliana ASAR1; GTP binding AT4G02080 (ASAR1) mRNA, complete cds Length = 903 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 672 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 613 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 612 tgcacatgaaaacctccaatggcctaacgttcgaatccg 574
>gb|AY096699.1| Arabidopsis thaliana putative SAR1/GTP-binding secretory factor (At4g02080) mRNA, complete cds Length = 613 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 580 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 521 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 520 tgcacatgaaaacctccaatggcctaacgttcgaatccg 482
>gb|AY065357.1| Arabidopsis thaliana putative SAR1/GTP-binding secretory factor (At4g02080) mRNA, complete cds Length = 926 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 637 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 578 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 577 tgcacatgaaaacctccaatggcctaacgttcgaatccg 539
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 151414 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 151355 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 151354 tgcacatgaaaacctccaatggcctaacgttcgaatccg 151316
>emb|BX827737.1|CNS0A32X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 453 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 394 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 393 tgcacatgaaaacctccaatggcctaacgttcgaatccg 355
>gb|AY088765.1| Arabidopsis thaliana clone 94610 mRNA, complete sequence Length = 884 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 672 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 613 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 612 tgcacatgaaaacctccaatggcctaacgttcgaatccg 574
>gb|AF001535.1|ATAF001535 Arabidopsis thaliana chromosome IV cosmid AGAA, complete sequence Length = 27502 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 23315 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 23256 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 23255 tgcacatgaaaacctccaatggcctaacgttcgaatccg 23217
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 48810 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 48751 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 48750 tgcacatgaaaacctccaatggcctaacgttcgaatccg 48712
>gb|U56929.1|ATU56929 Arabidospis thaliana GTP binding protein, Sar1 homolog (ASAR1) mRNA, complete cds Length = 899 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || || | |||||||||||||||||| || ||||| || | ||| |||| Sbjct: 650 acttgatgtattgagaaacccatttgaaaccttctccgtaacccattttcctgacaatgc 591 Query: 393 tgcacatgaacacctccaggggccgcacgtttgaatccg 431 |||||||||| ||||||| |||| ||||| ||||||| Sbjct: 590 tgcacatgaaaacctccaatggcctaacgttcgaatccg 552
>gb|AY620416.1| Oryza sativa (japonica cultivar-group) clone P0638H11 small GTP-binding protein (GBP) mRNA, complete cds Length = 760 Score = 65.9 bits (33), Expect = 1e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||| |||| || || || ||||||||| |||||||| || Sbjct: 629 acttgatgtactgtgacatccacntgaagccatcgccgtagcccatccggcggacgacgc 570 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 569 tgcacatgaagacctc 554
>gb|DQ228324.1| Solanum tuberosum clone 134H02 GTPase-like protein mRNA, complete cds Length = 964 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||| || |||||||| ||||| || || ||||| ||||||||||| || |||| Sbjct: 685 acttgatgtattgcgacatccacttgaagccctcaccatatcccatcttgcgcacaatgc 626 Query: 393 tgcacatgaacacctc 408 | ||||| |||||||| Sbjct: 625 tacacataaacacctc 610
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||| |||| || || || ||||||||| |||||||| || Sbjct: 6489774 acttgatgtactgtgacatccacctgaagccatcgccgtagcccatccggcggacgacgc 6489715 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 6489714 tgcacatgaagacctc 6489699
>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0638H11 Length = 162746 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||| |||| || || || ||||||||| |||||||| || Sbjct: 156718 acttgatgtactgtgacatccacctgaagccatcgccgtagcccatccggcggacgacgc 156659 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 156658 tgcacatgaagacctc 156643
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||||||||| |||||||| |||| || || || ||||||||| |||||||| || Sbjct: 6150 acttgatgtactgtgacatccacctgaagccatcgccgtagcccatccggcggacgacgc 6091 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 6090 tgcacatgaagacctc 6075
>gb|AY104010.1| Zea mays PCO105770 mRNA sequence Length = 1121 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 |||||||||||||||| | ||| |||||||| || || |||||||||||||| || | | Sbjct: 848 acttgatgtactgggagacccacttgaaaccatcaccgtagcccatcttgcgaacaacac 789 Query: 393 tgcacatgaacacctc 408 |||||||||| ||||| Sbjct: 788 tgcacatgaagacctc 773
>ref|NM_104512.2| Arabidopsis thaliana SAR1 (SECRETION-ASSOCIATED RAS); GTP binding AT1G56330 (SAR1) mRNA, complete cds Length = 943 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 649 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 590 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 589 cacatgaagacctc 576
>gb|AY096599.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330) mRNA, complete cds Length = 613 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 578 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 519 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 518 cacatgaagacctc 505
>gb|AY072220.1| Arabidopsis thaliana putative GTP-binding protein SAR1B (At1g56330) mRNA, complete cds Length = 950 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 643 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 584 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 583 cacatgaagacctc 570
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 21369 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 21310 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 21309 cacatgaagacctc 21296
>gb|AY085815.1| Arabidopsis thaliana clone 1854 mRNA, complete sequence Length = 904 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 649 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 590 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 589 cacatgaagacctc 576
>gb|U55036.1|BCU55036 Brassica campestris small GTP-binding protein Bsar1b (bsar1b) mRNA, complete cds Length = 829 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||| ||||| || || ||||| ||||| || |||||||||||| Sbjct: 658 ttgatgtactgagagagccacttgaatccctcgccatatcccattttccggacgatgctg 599 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 598 cacatgaagacctc 585
>gb|M95795.1|ATHGTPB Arabidopsis thaliana GTP-binding Sarl protein mRNA, complete cds Length = 905 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 ||||||||||| || | ||||||||| || || ||||| ||||| || ||||| |||||| Sbjct: 637 ttgatgtactgagagagccatttgaatccctcgccataacccattttacggacaatgctg 578 Query: 395 cacatgaacacctc 408 |||||||| ||||| Sbjct: 577 cacatgaagacctc 564
>gb|AC126778.9| Medicago truncatula clone mth2-32j21, complete sequence Length = 110448 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 333 acttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgc 392 ||||||| ||||| || | ||| | ||| ||||| ||||| |||||||||||||| || | Sbjct: 82508 acttgatatactgtgaaagccactggaagccttcgccatatcccatcttgcggacaatac 82567 Query: 393 tgcacatgaacac 405 ||||||||||||| Sbjct: 82568 tgcacatgaacac 82580
>ref|NM_116121.4| Arabidopsis thaliana GTP binding AT3G62560 mRNA, complete cds Length = 803 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 352 ccatttgaaaccttctccatagcccatcttgcggacgatgctgcacatgaacacctc 408 |||||| || ||||| || || |||||||| | ||| |||||||||||||||||||| Sbjct: 617 ccatttaaatccttcgccgtaacccatctttctgacaatgctgcacatgaacacctc 561
>gb|DQ216717.1| Taeniopygia guttata clone 0058P0055B06 SAR1a gene-like 2 variant 2-like mRNA, complete sequence Length = 1218 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 392 ctgcacatgaacacctccaggggcc 416 ||||||||||||||||||||||||| Sbjct: 677 ctgcacatgaacacctccaggggcc 653
>gb|AC126780.18| Medicago truncatula clone mth2-10n4, complete sequence Length = 139213 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 362 ccttctccatagcccatcttgcggacgatgctgcacatgaacacctcca 410 ||||| ||||| ||||||||||| || || || |||||||||||||||| Sbjct: 118637 ccttcaccatatcccatcttgcgaacaatactacacatgaacacctcca 118589
>gb|AY117363.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560) mRNA, complete cds Length = 613 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 352 ccatttgaaaccttctccatagcccatcttgcggacgatgctgcacatgaacacctc 408 |||||| || ||||| || || |||||||| | ||| |||||||||||||||||||| Sbjct: 561 ccatttaaatccttcgccgtaacccatctttctgacaatgctgcacatgaacacctc 505
>gb|AY070378.1| Arabidopsis thaliana putative Sar1 GTP binding protein (At3g62560) mRNA, complete cds Length = 795 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 352 ccatttgaaaccttctccatagcccatcttgcggacgatgctgcacatgaacacctc 408 |||||| || ||||| || || |||||||| | ||| |||||||||||||||||||| Sbjct: 617 ccatttaaatccttcgccgtaacccatctttctgacaatgctgcacatgaacacctc 561
>ref|XM_680422.1| PREDICTED: Danio rerio similar to SAR1a gene homolog 1 (LOC557367), mRNA Length = 924 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccgcacgtt 423 ||||||||||||||||||||| ||||| ||||| Sbjct: 864 gctgcacatgaacacctccagcggccggacgtt 832
>ref|NM_001008689.2| Sus scrofa SAR1a gene homolog 2 (SARA2), mRNA Length = 1289 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccg 417 |||||||||||||||||||| |||||| Sbjct: 676 gctgcacatgaacacctccaagggccg 650
>gb|AY819557.2| Sus scrofa Sar1b protein (Sar1b) mRNA, complete cds Length = 1289 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccg 417 |||||||||||||||||||| |||||| Sbjct: 676 gctgcacatgaacacctccaagggccg 650
>gb|DQ002890.1| Sus scrofa GTP-binding protein SAR1b mRNA, complete cds Length = 597 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccg 417 |||||||||||||||||||| |||||| Sbjct: 537 gctgcacatgaacacctccaagggccg 511
>gb|AY609439.1| Sus scrofa clone Clu_11585.scr.msk.p1.Contig2, mRNA sequence Length = 1233 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccg 417 |||||||||||||||||||| |||||| Sbjct: 619 gctgcacatgaacacctccaagggccg 593
>gb|AF048825.1|AF048825 Malus domestica GTP-binding protein Sar1 mRNA, complete cds Length = 709 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 368 ccatagcccatcttgcggacgatgctgcacatgaacacctccagggg 414 ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| Sbjct: 548 ccataacccattttgcgaacgatactgcacatgaagacctcgagggg 502
>gb|AY198410.1| Leishmania mexicana putative small GTP-binding protein and paraflagellar rod protein 4 (PFR4) genes, complete cds Length = 6245 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccgcac 420 |||||||||| ||||||||||||| ||||| Sbjct: 653 gctgcacatgtacacctccaggggacgcac 624
>ref|XM_421589.1| PREDICTED: Gallus gallus similar to SAR1a protein (LOC423711), mRNA Length = 3324 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 391 gctgcacatgaacacctccaggggccgcacgtt 423 |||||||||||||||||||| ||| ||| |||| Sbjct: 2499 gctgcacatgaacacctccatggggcgcgcgtt 2467
>emb|Y08424.1|NP50SAR N.plumbaginifolia mRNA for small GTP-binding protein, clone Np50SAR Length = 1013 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 382 gcggacgatgctgcacatgaacacctccagggg 414 |||||| |||||||||||||| ||||| ||||| Sbjct: 688 gcggactatgctgcacatgaatacctcaagggg 656
>gb|AC105218.4| Homo sapiens chromosome 8, clone RP11-410F13, complete sequence Length = 138416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 acactgtaactagtaaaatca 141 ||||||||||||||||||||| Sbjct: 102388 acactgtaactagtaaaatca 102368
>ref|NM_075050.1| Caenorhabditis elegans C38D9.3 (C38D9.3) mRNA, complete cds Length = 4491 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 acacgaacaatcaaacaaatc 168 ||||||||||||||||||||| Sbjct: 981 acacgaacaatcaaacaaatc 1001
>gb|BC059552.1| Danio rerio SAR1a gene homolog 2 (S. cerevisiae), mRNA (cDNA clone MGC:73204 IMAGE:4790013), complete cds Length = 1542 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 ctgcacatgaacacctccaggggcc 416 |||||||||||||||||||| |||| Sbjct: 645 ctgcacatgaacacctccagaggcc 621
>ref|NM_001024377.1| Danio rerio SAR1a gene homolog 2 (S. cerevisiae) (sara2), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 ctgcacatgaacacctccaggggcc 416 |||||||||||||||||||| |||| Sbjct: 645 ctgcacatgaacacctccagaggcc 621
>emb|Z81481.2|CEC38D9 Caenorhabditis elegans Cosmid C38D9, complete sequence Length = 42605 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 acacgaacaatcaaacaaatc 168 ||||||||||||||||||||| Sbjct: 30347 acacgaacaatcaaacaaatc 30367
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 aaggaagaggagacggacaaa 285 ||||||||||||||||||||| Sbjct: 3091409 aaggaagaggagacggacaaa 3091389
>ref|NM_100142.2| Arabidopsis thaliana GTP binding AT1G02620 mRNA, complete cds Length = 687 Score = 40.1 bits (20), Expect = 6.2 Identities = 62/76 (81%) Strand = Plus / Minus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 |||||||| || || | ||| ||||| ||||| ||||| ||||| || | || |||||| Sbjct: 365 ttgatgtattgagagagccacttgaagccttcaccatatcccatttttctaacaatgctg 306 Query: 395 cacatgaacacctcca 410 ||||| |||||||||| Sbjct: 305 cacataaacacctcca 290
>gb|AY691295.1| Ruminococcus callidus 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tttgaaaccttctccatagc 374 |||||||||||||||||||| Sbjct: 236 tttgaaaccttctccatagc 217
>emb|AL158830.17| Human DNA sequence from clone RP11-421H8 on chromosome 9 Contains the 3' end of the RECK gene for reversion-inducing-cysteine-rich protein with kazal motifs (ST15, hRECK), the C9orf19 gene for ,chromosome 9 open reading frame 19 (GAPR-1, GLIPR2), the CCIN gene for calicin, the CLTA gene for clathrin, light polypeptide (LCA), the gene for UDP-N-acetylglucosamine-2-epimerase/N-acetylmannosamine kinase (NM, DMRV, IBM2, GLCNE)(GNE) and five CpG islands, complete sequence Length = 191436 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cctgaatgctgccactgtgg 314 |||||||||||||||||||| Sbjct: 110330 cctgaatgctgccactgtgg 110349
>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 gacatccatttgaaaccttc 366 |||||||||||||||||||| Sbjct: 93734 gacatccatttgaaaccttc 93715
>emb|BX511213.5| Zebrafish DNA sequence from clone CH211-232G2 in linkage group 21, complete sequence Length = 161052 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 agattaaaataactgagaca 88 |||||||||||||||||||| Sbjct: 135743 agattaaaataactgagaca 135762
>gb|AC084128.6| Homo sapiens chromosome 8, clone CTD-3118D11, complete sequence Length = 129240 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 acttcccatagtctacaaat 107 |||||||||||||||||||| Sbjct: 36286 acttcccatagtctacaaat 36305
>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence Length = 175949 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aagtttcaccaacatattct 22 |||||||||||||||||||| Sbjct: 80140 aagtttcaccaacatattct 80121
>gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11, complete sequence Length = 139280 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cttacagctgcagttttccc 255 |||||||||||||||||||| Sbjct: 98800 cttacagctgcagttttccc 98781
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttacagctgcagttttccc 255 |||||||||||||||||||| Sbjct: 171217 cttacagctgcagttttccc 171236
>dbj|AB201247.1| Raja kenojei COL5/11A1 mRNA for type V/XI procollagen alpha 1 chain, complete cds Length = 6451 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tggacagcaggaaggctcct 331 |||||||||||||||||||| Sbjct: 646 tggacagcaggaaggctcct 627
>gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aatgacagattaaaataact 82 |||||||||||||||||||| Sbjct: 68254 aatgacagattaaaataact 68235
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete sequence Length = 121668 Score = 40.1 bits (20), Expect = 6.2 Identities = 62/76 (81%) Strand = Plus / Plus Query: 335 ttgatgtactgggacatccatttgaaaccttctccatagcccatcttgcggacgatgctg 394 |||||||| || || | ||| ||||| ||||| ||||| ||||| || | || |||||| Sbjct: 60174 ttgatgtattgagagagccacttgaagccttcaccatatcccatttttctaacaatgctg 60233 Query: 395 cacatgaacacctcca 410 ||||| |||||||||| Sbjct: 60234 cacataaacacctcca 60249
>gb|AC092047.3| Homo sapiens chromosome 3 clone RP11-219I21, complete sequence Length = 194742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttacagctgcagttttccc 255 |||||||||||||||||||| Sbjct: 32021 cttacagctgcagttttccc 32040
>emb|AL844141.7| Zebrafish DNA sequence from clone DKEY-30K6, complete sequence Length = 257634 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 agattaaaataactgagaca 88 |||||||||||||||||||| Sbjct: 235011 agattaaaataactgagaca 234992
>gb|DQ297930.1| Butyrivibrio fibrisolvens isolate LM8/1B 60kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tttgaaaccttctccatagc 374 |||||||||||||||||||| Sbjct: 236 tttgaaaccttctccatagc 217
>gb|AC153822.13| Mus musculus 10 BAC RP23-56N1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217746 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gacatccatttgaaaccttc 366 |||||||||||||||||||| Sbjct: 39080 gacatccatttgaaaccttc 39099
>emb|AL691469.9| Mouse DNA sequence from clone RP23-248F18 on chromosome 2, complete sequence Length = 191923 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gctgaaatgacagattaaaa 77 |||||||||||||||||||| Sbjct: 113936 gctgaaatgacagattaaaa 113917
>emb|AL671896.4| Mouse DNA sequence from clone RP23-354F16 on chromosome X, complete sequence Length = 78197 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aacatattctgaggctctga 32 |||||||||||||||||||| Sbjct: 15255 aacatattctgaggctctga 15236 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,335,212 Number of Sequences: 3902068 Number of extensions: 4335212 Number of successful extensions: 87297 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 87037 Number of HSP's gapped (non-prelim): 254 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)