>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)|
          Length = 1076

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = +3

Query: 156  ESPVSPTESKFKPRISPADLTARLFGLAQSRATNPVIPSPISGHEVSPGSKVRNFNPSVK 335
            ++P   T S F P   P    + L G   + ATN + PS I G   + GS     NPS  
Sbjct: 967  QTPSFNTNSSFTPSTVPNINFSGLNGGITNTATNALRPSDIFGANAASGSNSNVTNPS-- 1024

Query: 336  SHILKLVLHGGTGDAPSSSW 395
                   + GG G  P++S+
Sbjct: 1025 ------SIFGGAGGVPTTSF 1038

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
 Frame = +3

Query: 120 PFTCR--SQLHIDLESPVSPT--ESKFKPRISPA-DLTARLFGLAQSRATNPVIPSPI 278
           P+TC   S  ++ + SPV     E + +P+ +P     A  FG   ++  +PV+PSP+
Sbjct: 813 PYTCGGDSDQYVLMSSPVGRILEEERLEPQATPGPSQAASAFGAGPTQPPHPVVPSPV 870

>PPNK_RHOBA (Q7UWB8) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 311

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/74 (27%), Positives = 35/74 (47%)
 Frame = +3

Query: 132 RSQLHIDLESPVSPTESKFKPRISPADLTARLFGLAQSRATNPVIPSPISGHEVSPGSKV 311
           R QL   + SP+SP    ++P +  AD    L     + +T+ V+   I G ++  G +V
Sbjct: 215 RRQLQAIVISPISPHTLTYRPLVDSADTRLELAVTEPNESTSIVVDGRILG-QLKSGDRV 273

Query: 312 RNFNPSVKSHILKL 353
           R     V   +L++
Sbjct: 274 RVHRAPVSFEMLRV 287

>LPP_CHICK (Q5F464) Lipoma-preferred partner homolog|
          Length = 604

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = +3

Query: 132 RSQLHIDLESPVS-----PTESKFKPRISPADLTARLFGLAQSRATNPVIPSPISGHE 290
           RS L  +++S  S      + S +KPRI          G + S AT P + +P++GH+
Sbjct: 113 RSSLDAEIDSLTSILADLESSSPYKPRIQQGS------GTSSSAATTPSVSTPVTGHK 164

>HUTU_STRCO (Q9KZ75) Urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 572

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 315 NFNPSVKSHILKLVLHGGTGDAPSSSWKS 401
           N +P V  H  KLV++GGTG A +  W+S
Sbjct: 32  NLDPEVAEHPDKLVVYGGTGKA-ARDWRS 59

>HUTU_STRAW (Q82HL2) Urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 554

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 315 NFNPSVKSHILKLVLHGGTGDAPSSSWKS 401
           N +P V  H  KLV++GGTG A +  W+S
Sbjct: 32  NLDPEVAEHPDKLVVYGGTGKA-ARDWRS 59

>NFX1_HUMAN (Q12986) Transcriptional repressor NF-X1 (EC 6.3.2.-) (Nuclear|
           transcription factor, X box-binding, 1)
          Length = 1104

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -2

Query: 402 RTSKMKKARPPSRREEPVSKCEISHLG*NFELLTREKLRVR*LAMV*LGLLHGIELVQKA 223
           +++  ++A PPSR  EP S C + HL   F          R L M  L  +  + + Q+ 
Sbjct: 11  KSTLRQEAPPPSRAAEPRSSCTVHHLPVTFP--------GRSLMMKSLLFISIVIIRQEG 62

Query: 222 EPSSQQ 205
           +P SQQ
Sbjct: 63  KPKSQQ 68

>SYNPO_RAT (Q9Z327) Synaptopodin|
          Length = 931

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
 Frame = +3

Query: 117 TPFTCRSQLHIDLESPVSPTESKFKPRISPADLTARLFGLAQSRATNPVIPSPISGHE-- 290
           TP    S++H+ L  P S               TAR FG+     T+ +  SP+ G    
Sbjct: 450 TPTKVYSEVHLTLAKPASVVNR-----------TARPFGMQSPGTTSQIEQSPMMGRRHF 498

Query: 291 -----VSPGSKVRNFNPSVKSHIL 347
                  P S + + +P  + HI+
Sbjct: 499 GEKAWAPPASSMADRSPQPQRHIM 522

>PK3CD_MOUSE (O35904) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic|
           subunit delta isoform (EC 2.7.1.153) (PI3-kinase p110
           subunit delta) (PtdIns-3-kinase p110) (PI3K) (p110delta)
          Length = 1043

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = -2

Query: 426 QPEPTQPVRTSKMKKARPPSRREEPVSKCEISHLG*NFELLTREKLRV--R*LAMV*LGL 253
           Q  P   V+  + K    P+++   VS   +     + EL+   K+    R   +V  GL
Sbjct: 289 QSNPAPQVQKPRAKPPPIPAKKPSSVSLWSLEQPF-SIELIEGRKVNADERMKLVVQAGL 347

Query: 252 LHGIELVQKAEPSSQQGKCEA*IWIQ 175
            HG E++ K   SS+   C   +W Q
Sbjct: 348 FHGNEMLCKTVSSSEVNVCSEPVWKQ 373

>PTN5_MOUSE (P54830) Tyrosine-protein phosphatase non-receptor type 5 (EC|
           3.1.3.48) (Protein-tyrosine phosphatase
           striatum-enriched) (STEP) (Neural-specific
           protein-tyrosine phosphatase)
          Length = 541

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 156 ESPVSPTESKFKPRISPADLTARLFGLAQSRATN 257
           E+PV       KP   PA LT +  GL + R +N
Sbjct: 189 ETPVFDCVMDIKPETDPASLTVKSMGLQERRGSN 222

>PLS_STAAM (Q931E9) Putative surface protein SAV2496/SAV2497 precursor|
          Length = 1114

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +3

Query: 177 ESKFKPRISPADLTARLFGLAQSRATNPVIPSPISGHEVSPGSKVRNFNPSVKSHILKLV 356
           E KF P ++P        G    + T P + +P++G  +S G          K  I +L 
Sbjct: 566 ERKFNPDLAPGTEKVTREGQKGEKTTTPTLKNPLTGEIISKGESKEEI---TKDPINELT 622

Query: 357 LHGGTGDAP 383
            +G    AP
Sbjct: 623 EYGPETIAP 631

>FRMD6_HUMAN (Q96NE9) FERM domain-containing protein 6|
          Length = 622

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = -1

Query: 271 DGITGFVARD*ASPKSRAVKSAGEMRGLNLDSVGDTGLSKSM*SCDRH---VNGVGLYIT 101
           +G +G + ++  S  S + ++  ++RG + DS+  T   K   S DRH   ++ + LY  
Sbjct: 494 NGHSGLIVKEIGSSTSSSSETVVKLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQK 553

Query: 100 D*NTWKLRKLCSD 62
           D    ++  LC D
Sbjct: 554 D--FLRIAGLCQD 564

>UBP37_HUMAN (Q86T82) Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 37)
           (Ubiquitin-specific-processing protease 37)
           (Deubiquitinating enzyme 37)
          Length = 979

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +2

Query: 8   NLFFYGV-VEYTCMY---R*HMITTKFSELPRISVCYIQSYSVHMSITTSH*LGE 160
           +LFF    +EY+C     +  ++  KF+ LPR+ + +++ YS +++++ ++ +G+
Sbjct: 526 DLFFRAEELEYSCEKCGGKCALVRHKFNRLPRVLILHLKRYSFNVALSLNNKIGQ 580

>PK3CD_HUMAN (O00329) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic|
           subunit delta isoform (EC 2.7.1.153) (PI3-kinase p110
           subunit delta) (PtdIns-3-kinase p110) (PI3K) (p110delta)
          Length = 1044

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
 Frame = -2

Query: 420 EPTQPVRTSKMKKARPPSRREEPVSKCEISHLG*NF--ELLTREKLRV--R*LAMV*LGL 253
           E + P    +  +A+PP    +  S   +  L   F  EL+   K+    R   +V  GL
Sbjct: 288 EQSNPAPQVQKPRAKPPPIPAKKPSSVSLWSLEQPFRIELIQGSKVNADERMKLVVQAGL 347

Query: 252 LHGIELVQKAEPSSQQGKCEA*IWIQ 175
            HG E++ K   SS+   C   +W Q
Sbjct: 348 FHGNEMLCKTVSSSEVSVCSEPVWKQ 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,185,409
Number of Sequences: 219361
Number of extensions: 1412294
Number of successful extensions: 3897
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3893
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)