>gb|AC119943.12| Mus musculus chromosome 10, clone RP24-271F24, complete sequence
          Length = 174009

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 29    gttgaatatacatgcatgtaca 50
             ||||||||||||||||||||||
Sbjct: 63950 gttgaatatacatgcatgtaca 63929

>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence
          Length = 206230

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 85     tccacgtatttcagtctgttat 106
              ||||||||||||||||||||||
Sbjct: 180174 tccacgtatttcagtctgttat 180195

>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180869

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 29     gttgaatatacatgcatgtaca 50
              ||||||||||||||||||||||
Sbjct: 142995 gttgaatatacatgcatgtaca 142974

>gb|AC140190.3| Mus musculus BAC clone RP24-372P19 from 3, complete sequence
          Length = 205702

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 85    tccacgtatttcagtctgttat 106
             ||||||||||||||||||||||
Sbjct: 64925 tccacgtatttcagtctgttat 64946

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 362     cggcgggacgggggacgcgcc 382
               |||||||||||||||||||||
Sbjct: 2367762 cggcgggacgggggacgcgcc 2367782

>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 264    ataccatcgccaattagcgga 284
              |||||||||||||||||||||
Sbjct: 563518 ataccatcgccaattagcgga 563538

>gb|AC102573.10| Mus musculus chromosome 1, clone RP23-237L7, complete sequence
          Length = 185146

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 381    ccttcttcatcttggaagtcc 401
              |||||||||||||||||||||
Sbjct: 130910 ccttcttcatcttggaagtcc 130930

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 362    cggcgggacgggggacgcgcc 382
              |||||||||||||||||||||
Sbjct: 547851 cggcgggacgggggacgcgcc 547871

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 362    cggcgggacgggggacgcgcc 382
              |||||||||||||||||||||
Sbjct: 565062 cggcgggacgggggacgcgcc 565082

>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse BAC)
              complete sequence
          Length = 204950

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 381    ccttcttcatcttggaagtcc 401
              |||||||||||||||||||||
Sbjct: 159214 ccttcttcatcttggaagtcc 159194

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 362    cggcgggacgggggacgcgcc 382
              |||||||||||||||||||||
Sbjct: 276855 cggcgggacgggggacgcgcc 276835

>gb|AC165960.4| Mus musculus BAC clone RP23-395M20 from chromosome 17, complete sequence
          Length = 192675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 422    ggctgagccccttgggtgtggaga 445
              |||||||||||||||| |||||||
Sbjct: 159269 ggctgagccccttgggggtggaga 159292

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     aatatacatgcatgtacagg 52
              ||||||||||||||||||||
Sbjct: 874975 aatatacatgcatgtacagg 874994

>gb|AC159429.1| Trypanosoma brucei chromosome 7 clone RPCI93-28B13, complete sequence
          Length = 152128

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     aatatacatgcatgtacagg 52
              ||||||||||||||||||||
Sbjct: 117902 aatatacatgcatgtacagg 117883

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      acatgcatgtacaggtaaca 57
               ||||||||||||||||||||
Sbjct: 3367097 acatgcatgtacaggtaaca 3367078

>gb|AC131785.3| Mus musculus BAC clone RP24-397D13 from chromosome 17, complete
             sequence
          Length = 147557

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   ggctgagccccttgggtgtggaga 445
             |||||||||||||||| |||||||
Sbjct: 21912 ggctgagccccttgggggtggaga 21935

>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12,
             complete sequence
          Length = 177327

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    acatgcatgtacaggtaaca 57
             ||||||||||||||||||||
Sbjct: 62117 acatgcatgtacaggtaaca 62136

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      acatgcatgtacaggtaaca 57
               ||||||||||||||||||||
Sbjct: 3367208 acatgcatgtacaggtaaca 3367189

>gb|AF226853.1|AF226853 Bacteriophage phi-8 segment S, complete sequence
          Length = 3192

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   tttctgagcttccacgtatt 94
            ||||||||||||||||||||
Sbjct: 2288 tttctgagcttccacgtatt 2269


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,140,976
Number of Sequences: 3902068
Number of extensions: 3140976
Number of successful extensions: 57584
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57500
Number of HSP's gapped (non-prelim): 84
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)