>FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide|
           A]
          Length = 866

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +3

Query: 183 VTKGATIATSY-TAKEPSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGW-PSAP 356
           +T+G +  TSY T  E   PR PS   +   GSS       R P  SG      W P + 
Sbjct: 269 ITRGGS--TSYGTGSETESPRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSS 326

Query: 357 YPGS 368
            PGS
Sbjct: 327 GPGS 330

>AOX1_SAUGU (P22185) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)|
          Length = 349

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQ +ELK TPAP+GYH
Sbjct: 333 HYQDLELKTTPAPLGYH 349

>AOX1A_ARATH (Q39219) Alternative oxidase 1a, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 354

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG ELK  PAPIGYH
Sbjct: 338 HYQGRELKEAPAPIGYH 354

>AOX1B_ARATH (O23913) Alternative oxidase 1b, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 325

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG ELK  PAPIGYH
Sbjct: 309 HYQGRELKEAPAPIGYH 325

>AOX1C_ARATH (O22048) Alternative oxidase 1c, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 329

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG ELK  PAPIGYH
Sbjct: 313 HYQGHELKEAPAPIGYH 329

>AOX1_TOBAC (Q41224) Alternative oxidase 1, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 353

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG +LK +PAPIGYH
Sbjct: 337 HYQGQQLKDSPAPIGYH 353

>AOX2_TOBAC (Q40578) Alternative oxidase 2, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 297

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG +LK +PAPIGYH
Sbjct: 281 HYQGQQLKDSPAPIGYH 297

>ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7|
          Length = 920

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 201 IATSYTAKEPS-FPRKPSKRNTHLLGSSSDAKFSRRRPSLSG-IRSAPGWPSAPYPGS 368
           +A S +A  P+    KP+++      S +    S  +P LSG  RS PG+PS+P PG+
Sbjct: 316 MAQSLSAPGPTGLHYKPTEQFNGQGASFNGGSISYSQPGLSGPSRSIPGYPSSPLPGN 373

>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7|
          Length = 920

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 243 KPSKRNTHLLGSSSDAKFSRRRPSLSG-IRSAPGWPSAPYPGS 368
           KP+++      S +    S  +P LSG  RS PG+PS+P PG+
Sbjct: 331 KPTEQFNGQGASFNGGSVSYSQPGLSGPTRSIPGYPSSPLPGN 373

>AOX3_SOYBN (O03376) Alternative oxidase 3, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 326

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           ++QG ELK  PAPIGYH
Sbjct: 310 HHQGKELKEAPAPIGYH 326

>MFP1_ARATH (Q9LW85) MAR binding filament-like protein 1|
          Length = 726

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 246 PSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGW 344
           PS     LL SS+ AKF RRRP+L+ +    G+
Sbjct: 32  PSSSQFGLLCSSNVAKFKRRRPTLASLNQEDGY 64

>AOX2_SOYBN (Q41266) Alternative oxidase 2, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 333

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           ++QG EL+  PAPIGYH
Sbjct: 317 HFQGKELREAPAPIGYH 333

>UB2J1_MOUSE (Q9JJZ4) Ubiquitin-conjugating enzyme E2 J1 (EC 6.3.2.19)|
           (Non-canonical ubiquitin-conjugating enzyme 1) (NCUBE1)
          Length = 318

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = +3

Query: 189 KGATIATSYTAKEPS-----FPRKPSKRNTHLLGSSSDA-KFSRRRPSLS 320
           +GAT +TSY A+ PS      P +P+ +NT +      A + S+RRPS S
Sbjct: 219 QGATASTSYGAQNPSGAPLPQPTQPAPKNTSMSPRQRRAQQQSQRRPSTS 268

>KIRR1_RAT (Q6X936) Kin of IRRE-like protein 1 precursor (Kin of irregular|
           chiasm-like protein 1) (Nephrin-like protein 1)
          Length = 789

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 195 ATIATSYTAKEPS-FPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 356
           A +   Y A  P+ F  +PS R +H  G +    +SR   S  G    P  PSAP
Sbjct: 651 AVLYADYRAPGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASDYGTEPTPSGPSAP 705

>KIRR1_MOUSE (Q80W68) Kin of IRRE-like protein 1 precursor (Kin of irregular|
           chiasm-like protein 1) (Nephrin-like protein 1)
          Length = 789

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 195 ATIATSYTAKEPS-FPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 356
           A +   Y A  P+ F  +PS R +H  G +    +SR   S  G    P  PSAP
Sbjct: 651 AVLYADYRAPGPTRFDGRPSSRLSHSSGYAQLNTYSRAPASDYGTEPTPSGPSAP 705

>AOX3_ARATH (Q8LEE7) Alternative oxidase 3, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 318

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 366 YQGMELKATPAPIGYH 319
           ++G ELK  PAPIGYH
Sbjct: 303 FKGHELKEAPAPIGYH 318

>AOX1_SOYBN (Q07185) Alternative oxidase 1, mitochondrial precursor (EC|
           1.-.-.-)
          Length = 321

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 369 YYQGMELKATPAPIGYH 319
           +YQG EL+   APIGYH
Sbjct: 305 HYQGRELREAAAPIGYH 321

>PALF_NEUCR (Q7SGZ5) pH-response regulator protein palF/rim-8|
          Length = 927

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 213 YTAKEPSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAP 356
           YTA  PSFP   S    H   +  +  ++  RP   G  +  G PS+P
Sbjct: 834 YTAGGPSFPSAASGNGGHEEETVPEYTYNNHRPGSVGAVTVVGNPSSP 881

>GAT14_ARATH (Q9FH57) GATA transcription factor 14|
          Length = 339

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 216 TAKEPSFPRKPSKRNTHLLGSSSDAKFS-RRRPSLSGIRSAPGWPSAP 356
           T++ P FP+K  KR+   + S    +   +R+ S  G++  P W + P
Sbjct: 219 TSERPPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGP 266

>CD63_MOUSE (P41731) CD63 antigen|
          Length = 237

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 92  QIGSSLSEMGVQQYPKYVTDKHTAYFSVLDSYQRSNNC 205
           Q+ S  ++   QQ   Y+ D  TA  ++LD  Q+ NNC
Sbjct: 109 QVKSEFNKSFQQQMQNYLKDNKTA--TILDKLQKENNC 144

>DTX2_MOUSE (Q8R3P2) Protein deltex-2 (Deltex-2) (Deltex2) (mDTX2)|
          Length = 619

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = +3

Query: 228 PSFPRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAP------GWPSAP 356
           P++P   +   T  +  +  A     +PSLSG RSAP       W +AP
Sbjct: 222 PAYPAPQAPHRTTTVSGAHQAFAPYNKPSLSGARSAPRLNTTNPWAAAP 270

>AOX1_MANIN (Q40294) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)|
          Length = 318

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 363 QGMELKATPAPIGYH 319
           QG EL+  PAP+GYH
Sbjct: 304 QGKELRDAPAPVGYH 318

>POLB_CHPVU (Q9YTU2) ORFB polyprotein [Contains: Papain-like protease p48 (EC|
            3.4.22.-); Putative RNA-directed RNA polymerase/Helicase
            (EC 2.7.7.48) (EC 3.6.1.-)]
          Length = 3164

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 111  LKDEPIWLTPQYFRCQTPIDLPHYVHIPYLNITVP 7
            L+D   W  P  F   TP+ L     IP+L  T+P
Sbjct: 2760 LQDVEEWKGPTIFMSATPVALHGMADIPFLEPTLP 2794

>SPAG8_HUMAN (Q99932) Sperm-associated antigen 8 (Sperm membrane protein 1)|
           (SMP-1) (HSD-1) (Sperm membrane protein BS-84)
          Length = 426

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +3

Query: 246 PSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAPYPGS 368
           P   +  +LGSSS A       S  G  S PG  S P PGS
Sbjct: 139 PGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGS 179

>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 195 ATIATSYTAKEPSF--PRKPSKRNTHLLGSSSDAKFSRRRPSLSGIRSAPGWPSAPYP 362
           A    SY+ +  S   PR+ S R+  L  S+S ++ +  RP++S I     W ++P P
Sbjct: 8   ARFTNSYSLRTTSMETPREVS-RSGRLYQSASRSQMAYSRPTMSIISRTSSWRTSPRP 64

>SIA10_RAT (P61943) Type 2 lactosamine alpha-2,3-sialyltransferase (EC|
           2.4.99.-) (CMP-NeuAc:beta-galactoside
           alpha-2,3-sialyltransferase VI) (ST3Gal VI)
           (Sialyltransferase 10)
          Length = 331

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 230 GLFSCIGCRNCCSFGNYRVLRNKQCACQLRI*DIV 126
           G F  + C+ C   GN  VL+NK    ++   D++
Sbjct: 108 GQFDTVPCKRCVVVGNGGVLKNKTLGAKIDSYDVI 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,119,050
Number of Sequences: 219361
Number of extensions: 903000
Number of successful extensions: 3439
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)