>JTB_HUMAN (O76095) Protein JTB precursor (Jumping translocation breakpoint|
           protein) (Prostate androgen-regulated protein) (PAR
           protein)
          Length = 146

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
 Frame = +1

Query: 121 IPCSSTKRNKILGCRS-------LSHMEGVI*CVLYI*SCFLI 228
           I CSS+KRN+   CRS           EG + CV  I +C +I
Sbjct: 83  ITCSSSKRNEFKSCRSALMEQRLFWKFEGAVVCVALIFACLVI 125

>PRDM8_HUMAN (Q9NQV8) PR domain zinc finger protein 8 (PR domain-containing|
           protein 8)
          Length = 689

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = -3

Query: 401 SAFGKVAKAAT-----DVGTMTKEKMSAEEQQKGSGGSSYTPIR*SP 276
           SAF +V KAA      + GT     +++E+Q  G GG S TP   SP
Sbjct: 384 SAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPAAASP 430

>D250_ASFB7 (P32092) Protein D250R|
          Length = 250

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = +3

Query: 27  YYSILPQLKK------GKGSFQH--YLEPFCNNM*NPKVNSLLFYKEK 146
           YY ILP+ KK      GK  ++H  +L   C ++  P +N  L Y+ +
Sbjct: 158 YYQILPEFKKSMSYFDGKTEYKHIYFLAMLCKSLEEPNMNLSLQYENR 205

>JTB_MOUSE (O88824) Protein JTB precursor|
          Length = 146

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
 Frame = +1

Query: 121 IPCSSTKRNKILGCRSL---SHM----EGVI*CVLYI*SCFLI 228
           I CSS+KRN+   CRS     H+    EGV+  V  + +C +I
Sbjct: 83  ITCSSSKRNEFKSCRSALLEQHLFWKFEGVVVAVALVFACLVI 125

>SMOO_HUMAN (P53814) Smoothelin|
          Length = 917

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 401 SAFGKVAKAATDVGTMTKEKMSAEEQQKGSGGSSYTPI--R*SPSPVPHCASPCCII 237
           S+F +       V   T +   A   Q G+  ++ +P+  R +P P+PH   PC ++
Sbjct: 322 SSFQRAGSVRDRVHKFTSDSPMAARLQDGTPQAALSPLTPRKAPGPLPHQHHPCVLL 378

>RIR1_MIMIV (Q7T6Y8) Ribonucleoside-diphosphate reductase large chain (EC|
           1.17.4.1) (Ribonucleotide reductase)
          Length = 881

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 146 FLFVEEQGIYLGVLHVITKWFKVMLER--TFSFFKLWKDAV 30
           +L  E +GIYL  +  I  WFK+M  +  T   + ++KDA+
Sbjct: 437 YLKYESEGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAI 477

>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = -3

Query: 362  GTMTKEKMSAEEQQKGSGGSS------YTPIR*SPSPVPHCASP 249
            G+ T+ +   +    G GGSS       +P+  SPSPVP  ASP
Sbjct: 1181 GSSTEAEPPTQPDGAGGGGSSPSPAPATSPVPPSPSPVPTPASP 1224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,228,348
Number of Sequences: 219361
Number of extensions: 1332139
Number of successful extensions: 3609
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3609
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)