>T2M4_METJA (Q58723) Type II restriction enzyme MjaIV (EC 3.1.21.4)|
           (Endonuclease MjaIV) (R.MjaIV)
          Length = 245

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -3

Query: 283 QLLFNRGGHNKLWCWSPRMASVYRVGEVLFQAGCVQPDLWPKTQNNLFFVLWKPNI 116
           +L++NR   N++  +   +   YR G   F    ++ D +   +NN+F + + PN+
Sbjct: 137 ELVYNRISGNEIVSYGIFVVDKYRRGYKFFLLEEIKDDFYVNPRNNMFQIRYSPNL 192

>UBIB_PASMU (Q9CKD4) Probable ubiquinone biosynthesis protein ubiB|
          Length = 527

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 101 LVSPANVWFPKYKKKIILCLGPQIRLHTACLKQNLPHSINR 223
           L +P   WF ++ +   L      ++HTA  KQN PH  NR
Sbjct: 113 LGAPLETWFDEFNETA-LASASIAQVHTAKFKQNAPHLENR 152

>GON2_HUMAN (O43555) Progonadoliberin-2 precursor (Progonadoliberin II)|
           [Contains: Gonadoliberin-2 (Gonadoliberin II)
           (Luteinizing hormone-releasing hormone II) (LH-RH II)
           (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin
           II); GnRH-associated pepti
          Length = 120

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 172 QAAHSLPETKPPPLYKQMPFWGSSTTTYCVHR 267
           Q AH LP     PL   MP+ G +T  + +HR
Sbjct: 64  QTAHGLPSDALAPLDDSMPWEGRTTAQWSLHR 95

>LYS_GALME (P82174) Lysozyme (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)|
          Length = 121

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 13  QCLNKYICN*SERAGK*NTVQKNLLLHIATSFTSKCLVSKVQKKDYFVSW 162
           Q  +KY C+ + +AGK   +  + LL    +  SKC   KV K+  F++W
Sbjct: 55  QINDKYWCSNTSKAGKDCNITCSQLLTDDITVASKC-AKKVYKRHNFMAW 103

>UNG_VZVD (P09307) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 305

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 258 TISCGAGAPEWHLFIEWGRFCFRQAVCSLICGPRHKIIFFLY 133
           T++   G P  H+++ WGR    Q V   +C  R  ++F L+
Sbjct: 209 TLTVRRGTPGSHVYLGWGRLV--QRVLQRLCENRTGLVFMLW 248

>RIBAB_STAES (Q8CNU2) Riboflavin biosynthesis protein ribAB [Includes: GTP|
           cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II);
           3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
           synthase)]
          Length = 393

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 164 PQIRLHTACLKQNLPHSINRCHSGA 238
           P +R+H+ACL  ++ HS  RC  GA
Sbjct: 246 PNVRMHSACLTGDIFHS-QRCDCGA 269

>RIBAB_STAEQ (Q5HNE3) Riboflavin biosynthesis protein ribAB [Includes: GTP|
           cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II);
           3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
           synthase)]
          Length = 393

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 164 PQIRLHTACLKQNLPHSINRCHSGA 238
           P +R+H+ACL  ++ HS  RC  GA
Sbjct: 246 PNVRMHSACLTGDIFHS-QRCDCGA 269

>NORM_VIBF1 (Q5E4Y6) Multidrug resistance protein norM (Na(+)/drug antiporter)|
           (Multidrug-efflux transporter)
          Length = 460

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 235 PRMASVYRVGEVLFQAGCVQPDLWPKTQNNLFFVLW 128
           P M  +Y  G ++  A  V+P+L+ KTQ  L  VLW
Sbjct: 101 PIMLVLYNAGFII-AAMDVEPELYEKTQGYLHAVLW 135

>TBB1_SOYBN (P12459) Tubulin beta-1 chain (Beta-1 tubulin)|
          Length = 445

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 133 VQKKD--YFVSWATNQAAHSLPETKPPPLYKQMPFWGSSTT 249
           VQ K+  YFV W  N    S+ +  P  L     F G+ST+
Sbjct: 333 VQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTS 373

>YCUB_SCHPO (O59831) Putative amino-acid permease C965.11c|
          Length = 537

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 151 FVSWATNQAAHSLPETKPPPLYKQMP 228
           F  +A   AA  +P  KPP L+K+MP
Sbjct: 195 FYIFAIIYAAGGIPHHKPPNLFKEMP 220

>TBB7_GOSHI (Q6VAF5) Tubulin beta-7 chain (Beta-7 tubulin)|
          Length = 444

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +1

Query: 133 VQKKD--YFVSWATNQAAHSLPETKPPPLYKQMPFWGSSTT 249
           VQ K+  YFV W  N    S+ +  P  L     F G+ST+
Sbjct: 333 VQNKNSSYFVEWIPNNVKSSVCDIPPTGLTMSSTFMGNSTS 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,687,247
Number of Sequences: 219361
Number of extensions: 1119400
Number of successful extensions: 2795
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2795
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)