ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, complete cds 718 0.0
2gb|AF247165.1| Oryza sativa alpha-expansin OsEXPA10 mRNA, comple... 155 2e-34
3emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 155 2e-34
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AK066414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
6dbj|AK062225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
7ref|XM_473658.1| Oryza sativa (japonica cultivar-group), predic... 153 7e-34
8gb|AY111047.1| Zea mays CL11344_1 mRNA sequence 135 2e-28
9gb|AY105640.1| Zea mays PCO063012 mRNA sequence 135 2e-28
10ref|XM_220636.3| PREDICTED: Rattus norvegicus similar to CG14967... 44 0.45
11emb|AL929447.7| Mouse DNA sequence from clone RP23-360O17 on chr... 44 0.45
12ref|NM_119446.1| Arabidopsis thaliana unknown protein AT4G32920 ... 42 1.8
13gb|AC098742.4| Mus musculus BAC clone RP23-122N2 from 14, comple... 42 1.8
14gb|AC091738.4| Homo sapiens BAC clone RP11-535E8 from 7, complet... 42 1.8
15emb|AL451069.34| Human DNA sequence from clone RP11-432J24 on ch... 42 1.8
16emb|Z97992.2|SPBC30D10 S.pombe chromosome II cosmid c30D10 42 1.8
17emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, ... 42 1.8
18emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, B... 42 1.8
19gb|AY057633.1| Arabidopsis thaliana AT4g32920/F26P21_40 mRNA, co... 42 1.8
20ref|NM_001022197.1| Schizosaccharomyces pombe 972h- hypothetical... 42 1.8
21emb|AL691519.8| Mouse DNA sequence from clone RP23-346N8 on chro... 42 1.8
22gb|BT002256.1| Arabidopsis thaliana At4g32920/F26P21_40 mRNA, co... 42 1.8
23gb|AC154243.2| Mus musculus BAC clone RP24-173F3 from 14, comple... 42 1.8
24gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.53... 42 1.8
25dbj|AP002472.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.8
26gb|AE016855.1| Pseudomonas syringae pv. tomato str. DC3000 plasm... 40 7.0
27gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosom... 40 7.0
28emb|CR533572.5| Zebrafish DNA sequence from clone CH211-218K21 i... 40 7.0
29emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in... 40 7.0
30gb|AC160863.10| Mus musculus 10 BAC RP23-234F23 (Roswell Park Ca... 40 7.0
31gb|AC079052.4| Homo sapiens chromosome 18, clone RP11-142I20, co... 40 7.0
32gb|AC021504.5|AC021504 Homo sapiens chromosome 18, clone RP11-16... 40 7.0
33emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chr... 40 7.0
34gb|AF186997.6| Homo sapiens chromosome 8 clone CTA-398F10 map p2... 40 7.0
35gb|AC063932.14| Homo sapiens 3 BAC RP11-298A18 (Roswell Park Can... 40 7.0
36gb|AC103957.8| Homo sapiens chromosome 8, clone CTA-398F10, comp... 40 7.0
37gb|AC068353.34| Homo sapiens chromosome 8, clone RP11-399J23, co... 40 7.0
38emb|BX537271.3| Zebrafish DNA sequence from clone CH211-261P7 in... 40 7.0
39dbj|AP005901.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.0
40dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 7.0
41gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasm... 40 7.0 
>gb|AY543533.1| Triticum aestivum expansin EXPA7 mRNA, complete cds
          Length = 1031

 Score =  718 bits (362), Expect = 0.0
 Identities = 416/434 (95%)
 Strand = Plus / Minus

                                                                        
Query: 83   gaacaactatctgaggctctgcactaaactgatatttgtcctaataatcagctcgttcct 142
            ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1031 gaacaactatctgaggctctgcactaaactgatatgtttcctaataatcagctcgttcct 972

                                                                        
Query: 143  cagaggaatgtacagtagagattatattcctttcctaataataaccttgttcctcagaaa 202
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 971  cagaggaatgtacagtagagattatattcctttcctaataataatcttgttcctcagaag 912

                                                                        
Query: 203  gatatacagtactacaaccaactcataggatgatttttcttctttgagaaattgtaagtc 262
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 911  gatatacagtactacaaccaactcgtaggatgatttttcttctttgagaaattgtaagtc 852

                                                                        
Query: 263  gcgatcaataattttctagagaaggaactgcttgccggtgtatgttttgccaaactccca 322
             | |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 851  cctatcaataattctctagagcaggaattgcttgccggtgtatgttttgccaaactccca 792

                                                                        
Query: 323  atccttgggcacgacgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaa 382
            |||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 791  atccttgggcacaacgttaaaattggtcatcgtcgtgccgtcactcgaggtgagctcaaa 732

                                                                        
Query: 383  ggataccggctgccctgttagatctaagttgatgtgccatatctggccccagttgcggcc 442
            ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 731  ggacaccggctgccctgtgagatctaagttgatgtgccatatctggccccagttgcggcc 672

                                                                        
Query: 443  catgtcgagccagccagagtctgttcctttgatcttcactgatctgacatcaccagcgcc 502
            ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 671  catatcgagccagccagactctgttcctttgatcttcactgatctgacatcgccagcgcc 612

                          
Query: 503  accgacattgctga 516
            ||||||||||||||
Sbjct: 611  accgacattgctga 598
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>gb|AF247165.1| Oryza sativa alpha-expansin OsEXPA10 mRNA, complete cds
          Length = 1119

 Score =  155 bits (78), Expect = 2e-34
 Identities = 198/238 (83%)
 Strand = Plus / Minus

                                                                       
Query: 277 tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
           ||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 790 tctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggacca 731

                                                                       
Query: 337 cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
           ||||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| |
Sbjct: 730 cgttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtc 671

                                                                       
Query: 397 ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
           |  | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| |
Sbjct: 670 ccctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaac 611

                                                                     
Query: 457 cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
           | || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 610 cggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 553
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>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score =  155 bits (78), Expect = 2e-34
 Identities = 198/238 (83%)
 Strand = Plus / Minus

                                                                          
Query: 277    tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
              ||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 134500 tctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggacca 134441

                                                                          
Query: 337    cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
              ||||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| |
Sbjct: 134440 cgttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtc 134381

                                                                          
Query: 397    ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
              |  | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| |
Sbjct: 134380 ccctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaac 134321

                                                                        
Query: 457    cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
              | || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 134320 cggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 134263
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  155 bits (78), Expect = 2e-34
 Identities = 198/238 (83%)
 Strand = Plus / Minus

                                                                            
Query: 277      tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
                ||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 29461484 tctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggacca 29461425

                                                                            
Query: 337      cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
                ||||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| |
Sbjct: 29461424 cgttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtc 29461365

                                                                            
Query: 397      ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
                |  | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| |
Sbjct: 29461364 ccctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaac 29461305

                                                                          
Query: 457      cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
                | || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 29461304 cggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 29461247
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>dbj|AK066414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067I11, full
            insert sequence
          Length = 3105

 Score =  155 bits (78), Expect = 2e-34
 Identities = 198/238 (83%)
 Strand = Plus / Minus

                                                                        
Query: 277  tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
            ||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 2877 tctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggacca 2818

                                                                        
Query: 337  cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
            ||||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| |
Sbjct: 2817 cgttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtc 2758

                                                                        
Query: 397  ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
            |  | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| |
Sbjct: 2757 ccctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaac 2698

                                                                      
Query: 457  cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
            | || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 2697 cggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 2640
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>dbj|AK062225.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C11, full
           insert sequence
          Length = 1162

 Score =  155 bits (78), Expect = 2e-34
 Identities = 198/238 (83%)
 Strand = Plus / Minus

                                                                       
Query: 277 tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
           ||||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 896 tctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggacca 837

                                                                       
Query: 337 cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
           ||||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| |
Sbjct: 836 cgttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtc 777

                                                                       
Query: 397 ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
           |  | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| |
Sbjct: 776 ccctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaac 717

                                                                     
Query: 457 cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
           | || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 716 cggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 659
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>ref|XM_473658.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score =  153 bits (77), Expect = 7e-34
 Identities = 197/237 (83%)
 Strand = Plus / Minus

                                                                       
Query: 278 ctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacgac 337
           |||||| |||||||||||||| |||||||||||||| || ||||| ||||| || || ||
Sbjct: 774 ctagagcaggaactgcttgccagtgtatgttttgccgaagtcccactccttagggaccac 715

                                                                       
Query: 338 gttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgccc 397
           |||  | || ||||  ||  | |||||||| ||||||||||| ||||| |  ||||| ||
Sbjct: 714 gttgtagttggtcaatgtttttccatcacttgaggtgagctcgaaggagagaggctgtcc 655

                                                                       
Query: 398 tgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagcc 457
             | | |||  ||||||||||||||||||| |||||||||||||||||   |||||| ||
Sbjct: 654 cctgaaatcagagttgatgtgccatatctgcccccagttgcggcccatcgagagccaacc 595

                                                                    
Query: 458 agagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgct 514
            || || |||||||||||||||||||||| |||||| ||||| ||||||||||||||
Sbjct: 594 ggactccgttcctttgatcttcactgatcggacatcgccagcaccaccgacattgct 538
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>gb|AY111047.1| Zea mays CL11344_1 mRNA sequence
          Length = 927

 Score =  135 bits (68), Expect = 2e-28
 Identities = 197/240 (82%)
 Strand = Plus / Plus

                                                                       
Query: 277 tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
           |||| ||||| || ||||| || |||||||| |||||| ||||||||||||| || ||||
Sbjct: 317 tctacagaagaaattgcttccccgtgtatgtcttgccatactcccaatccttagggacga 376

                                                                       
Query: 337 cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
           |||| ||| | |||| || | ||||||| |||||| |||||||||| ||||  || || |
Sbjct: 377 cgttgaaactggtcagcgccttgccatcgctcgagctgagctcaaacgatagaggttgtc 436

                                                                       
Query: 397 ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
           |  | |  ||  ||||||||||||| | |||||||||||||||||||||   |||||| |
Sbjct: 437 ccctcatgtcacagttgatgtgccacacctggccccagttgcggcccatcgggagccatc 496

                                                                       
Query: 457 cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgctga 516
           |  | |||||||||||||||||||| ||||| |||||||| |||||||| || |||||||
Sbjct: 497 ccaactctgttcctttgatcttcacagatctaacatcacccgcgccaccaacgttgctga 556



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   gaatgatacatcaagcctct 22
           ||||||||||||||||||||
Sbjct: 102 gaatgatacatcaagcctct 121
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>gb|AY105640.1| Zea mays PCO063012 mRNA sequence
          Length = 1044

 Score =  135 bits (68), Expect = 2e-28
 Identities = 197/240 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 tctagagaaggaactgcttgccggtgtatgttttgccaaactcccaatccttgggcacga 336
           |||| ||||| |||||||| || |||||||| ||||| ||||||||||||||||||||||
Sbjct: 924 tctacagaagaaactgcttccccgtgtatgtcttgccgaactcccaatccttgggcacga 865

                                                                       
Query: 337 cgttaaaattcgtcatcgtcgtgccatcactcgaggtgagctcaaaggataccggctgcc 396
           |||| ||| | |||| |||| ||| ||| || ||| |||||||||| ||||  ||||| |
Sbjct: 864 cgttgaaactggtcagcgtcttgctatcgcttgagctgagctcaaacgatagaggctgtc 805

                                                                       
Query: 397 ctgttagatctaagttgatgtgccatatctggccccagttgcggcccatgtcgagccagc 456
           |  | |  ||  ||||||||||||| | |||||||||||||||||||||   |||||| |
Sbjct: 804 ccctcatgtcacagttgatgtgccacacctggccccagttgcggcccatagggagccatc 745

                                                                       
Query: 457 cagagtctgttcctttgatcttcactgatctgacatcaccagcgccaccgacattgctga 516
           |    || ||||||||||||||||| || || |||||||| |||||||| || |||||||
Sbjct: 744 ctagctccgttcctttgatcttcacagacctaacatcacccgcgccaccaacgttgctga 685
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>ref|XM_220636.3| PREDICTED: Rattus norvegicus similar to CG14967-PA (predicted)
            (LOC303280), mRNA
          Length = 7452

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 45   atagtacatccgacaattacaa 66
            ||||||||||||||||||||||
Sbjct: 5233 atagtacatccgacaattacaa 5212
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>emb|AL929447.7| Mouse DNA sequence from clone RP23-360O17 on chromosome 4, complete
            sequence
          Length = 36704

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 232  atgatttttcttctttgagaaa 253
            ||||||||||||||||||||||
Sbjct: 5258 atgatttttcttctttgagaaa 5237
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>ref|NM_119446.1| Arabidopsis thaliana unknown protein AT4G32920 mRNA, complete cds
          Length = 4877

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 236  tttttcttctttgagaaattgtaag 260
            |||||||||||| ||||||||||||
Sbjct: 3762 tttttcttctttaagaaattgtaag 3738
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>gb|AC098742.4| Mus musculus BAC clone RP23-122N2 from 14, complete sequence
          Length = 218683

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    tgatttttcttctttgagaaa 253
              |||||||||||||||||||||
Sbjct: 196966 tgatttttcttctttgagaaa 196986
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>gb|AC091738.4| Homo sapiens BAC clone RP11-535E8 from 7, complete sequence
          Length = 131928

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   tctgttcctttgatcttcact 482
             |||||||||||||||||||||
Sbjct: 40555 tctgttcctttgatcttcact 40535
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>emb|AL451069.34| Human DNA sequence from clone RP11-432J24 on chromosome 10 Contains the
             3' end of gene LOC170394, four novel genes, gene
             LOC170393, the 5' end of the INPP5A gene for inositol
             polyphosphate-5-phosphatase 40kDa and five CpG islands,
             complete sequence
          Length = 149579

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   tgttcctcagaaagatataca 210
             |||||||||||||||||||||
Sbjct: 66223 tgttcctcagaaagatataca 66243
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>emb|Z97992.2|SPBC30D10 S.pombe chromosome II cosmid c30D10
          Length = 37838

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   atcaataattttctagagaag 286
             |||||||||||||||||||||
Sbjct: 25734 atcaataattttctagagaag 25754
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>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78
          Length = 198669

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 236    tttttcttctttgagaaattgtaag 260
              |||||||||||| ||||||||||||
Sbjct: 110735 tttttcttctttaagaaattgtaag 110759
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>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project)
          Length = 94482

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 236   tttttcttctttgagaaattgtaag 260
             |||||||||||| ||||||||||||
Sbjct: 20039 tttttcttctttaagaaattgtaag 20063
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>gb|AY057633.1| Arabidopsis thaliana AT4g32920/F26P21_40 mRNA, complete cds
          Length = 1663

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 236 tttttcttctttgagaaattgtaag 260
           |||||||||||| ||||||||||||
Sbjct: 548 tttttcttctttaagaaattgtaag 524
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>ref|NM_001022197.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC30D10.09c), partial mRNA
          Length = 654

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 266 atcaataattttctagagaag 286
           |||||||||||||||||||||
Sbjct: 502 atcaataattttctagagaag 522
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>emb|AL691519.8| Mouse DNA sequence from clone RP23-346N8 on chromosome 4, complete
              sequence
          Length = 208014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 184    taaccttgttcctcagaaagatata 208
              |||||||||| ||||||||||||||
Sbjct: 188446 taaccttgttgctcagaaagatata 188422
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>gb|BT002256.1| Arabidopsis thaliana At4g32920/F26P21_40 mRNA, complete cds
          Length = 1041

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 236 tttttcttctttgagaaattgtaag 260
           |||||||||||| ||||||||||||
Sbjct: 504 tttttcttctttaagaaattgtaag 480
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>gb|AC154243.2| Mus musculus BAC clone RP24-173F3 from 14, complete sequence
          Length = 152254

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   tgatttttcttctttgagaaa 253
             |||||||||||||||||||||
Sbjct: 47753 tgatttttcttctttgagaaa 47773
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>gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.537_E_1, complete sequence
          Length = 217421

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   aggatgatttttcttctttga 249
             |||||||||||||||||||||
Sbjct: 79223 aggatgatttttcttctttga 79203
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>dbj|AP002472.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-710M11, complete
             sequence
          Length = 109000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   aggatgatttttcttctttga 249
             |||||||||||||||||||||
Sbjct: 99961 aggatgatttttcttctttga 99981
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>gb|AE016855.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete
             sequence
          Length = 73661

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   ccatgtcgagccagccagag 461
             ||||||||||||||||||||
Sbjct: 58356 ccatgtcgagccagccagag 58337
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>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence
          Length = 221128

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    aatgtacagtagagattata 168
              ||||||||||||||||||||
Sbjct: 169518 aatgtacagtagagattata 169537
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>emb|CR533572.5| Zebrafish DNA sequence from clone CH211-218K21 in linkage group 16,
             complete sequence
          Length = 31419

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tagagaaggaactgcttgcc 298
             ||||||||||||||||||||
Sbjct: 10396 tagagaaggaactgcttgcc 10377
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>emb|BX649529.23| Zebrafish DNA sequence from clone DKEYP-74F1 in linkage group 17,
              complete sequence
          Length = 216647

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gaggaatgtacagtagagat 164
              ||||||||||||||||||||
Sbjct: 194138 gaggaatgtacagtagagat 194157
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>gb|AC160863.10| Mus musculus 10 BAC RP23-234F23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 189718

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aggctctgcactaaactgat 115
             ||||||||||||||||||||
Sbjct: 87213 aggctctgcactaaactgat 87232
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>gb|AC079052.4| Homo sapiens chromosome 18, clone RP11-142I20, complete sequence
          Length = 164220

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  aatgtacagtagagattata 168
            ||||||||||||||||||||
Sbjct: 5876 aatgtacagtagagattata 5895
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>gb|AC021504.5|AC021504 Homo sapiens chromosome 18, clone RP11-164M8, complete sequence
          Length = 177068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    aatgtacagtagagattata 168
              ||||||||||||||||||||
Sbjct: 124885 aatgtacagtagagattata 124904
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>emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chromosome 2, complete
             sequence
          Length = 187738

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aatgtacagtagagattata 168
             ||||||||||||||||||||
Sbjct: 37417 aatgtacagtagagattata 37436
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>gb|AF186997.6| Homo sapiens chromosome 8 clone CTA-398F10 map p22-p21, complete
             sequence
          Length = 162504

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agctcgttcctcagaggaat 151
             ||||||||||||||||||||
Sbjct: 32964 agctcgttcctcagaggaat 32945
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>gb|AC063932.14| Homo sapiens 3 BAC RP11-298A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186897

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 35    agatttgaaaatagtacatccgacaattacaa 66
             |||| ||||||||||||||| || ||||||||
Sbjct: 20398 agatatgaaaatagtacatctgataattacaa 20429
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>gb|AC103957.8| Homo sapiens chromosome 8, clone CTA-398F10, complete sequence
          Length = 162398

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    agctcgttcctcagaggaat 151
              ||||||||||||||||||||
Sbjct: 129432 agctcgttcctcagaggaat 129451
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>gb|AC068353.34| Homo sapiens chromosome 8, clone RP11-399J23, complete sequence
          Length = 105330

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agctcgttcctcagaggaat 151
             ||||||||||||||||||||
Sbjct: 98238 agctcgttcctcagaggaat 98219
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>emb|BX537271.3| Zebrafish DNA sequence from clone CH211-261P7 in linkage group 2,
             complete sequence
          Length = 169504

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   gagattatattcctttccta 179
             ||||||||||||||||||||
Sbjct: 29847 gagattatattcctttccta 29866
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>dbj|AP005901.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-454P7, complete
             sequence
          Length = 194034

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   cactaaactgatatttgtcc 123
             ||||||||||||||||||||
Sbjct: 95512 cactaaactgatatttgtcc 95493
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>dbj|AP006394.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01K09, TM0278,
             complete sequence
          Length = 82082

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   ataggatgatttttcttctttgag 250
             |||| |||||||||||||||||||
Sbjct: 35543 atagcatgatttttcttctttgag 35520
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>gb|AE016854.1| Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete
             sequence
          Length = 67473

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   ccatgtcgagccagccagag 461
             ||||||||||||||||||||
Sbjct: 53323 ccatgtcgagccagccagag 53304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,109,523
Number of Sequences: 3902068
Number of extensions: 5109523
Number of successful extensions: 96637
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96508
Number of HSP's gapped (non-prelim): 127
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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