ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full... 662 0.0
2ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA 220 3e-54
3dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
4dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
5dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
6dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 168 9e-39
8gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 168 9e-39
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 168 9e-39
10gb|AY105738.1| Zea mays PCO070960 mRNA sequence 165 1e-37
11emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxym... 98 3e-17
12emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxym... 88 3e-14
13emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltr... 72 2e-09
14dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone... 60 6e-06
15dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone... 60 6e-06
16ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYL... 56 1e-04
17emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
18emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
19emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hy... 56 1e-04
20gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 56 1e-04
21gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 56 1e-04
22gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 ... 56 1e-04
23gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, co... 56 1e-04
24gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, co... 56 1e-04
25emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
26gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete s... 56 1e-04
27ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltrans... 50 0.006
28ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltrans... 50 0.006
29ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltrans... 50 0.006
30gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative g... 50 0.006
31gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymeth... 50 0.006
32dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymet... 50 0.006
33gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete seq... 50 0.006
34emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Co... 50 0.006
35gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative g... 50 0.006
36gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome... 44 0.36
37gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 44 0.36
38gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase... 44 0.36
39gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Canc... 44 0.36
40gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, co... 42 1.4
41emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C... 42 1.4
42emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H1... 42 1.4
43gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y... 42 1.4
44gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 40 5.7
45ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.7
46emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, comple... 40 5.7
47gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, co... 40 5.7
48ref|XM_781957.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.7
49emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin... 40 5.7
50emb|BX323797.10| Zebrafish DNA sequence from clone DKEY-78A14 in... 40 5.7
51ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain struc... 40 5.7
52gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosom... 40 5.7
53dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.7
54gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_1... 40 5.7
55dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.7
56gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA... 40 5.7
57gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransfera... 40 5.7
58dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, c... 40 5.7 
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA
            sequence
          Length = 1878

 Score =  662 bits (334), Expect = 0.0
 Identities = 377/390 (96%), Gaps = 1/390 (0%)
 Strand = Plus / Minus

                                                                        
Query: 23   tatagcatatcagcgaaacatcttacagtatgtgcctgcaataagaaactattgacaaag 82
            ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1793 tatagcatatcagcgaagcatcttacagtatgtgcctgcaataagaaactatcgacaaag 1734

                                                                        
Query: 83   ttcccatattctgtaaaatgcttggattccttttacataagatggcgcttcatcatggat 142
            ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 1733 ttcccatattctgtaaaatgcttggattccttttacatatggtggcgcttcatcatggat 1674

                                                                        
Query: 143  ctattgtttacatggacttgtcctcagttgtgcttcctgtttgcttcctt-gctgttgaa 201
            ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 1673 ctattgtttacatggacttgtcctcagctgtgcttcttgtttgcttcctttgctgttgaa 1614

                                                                        
Query: 202  acacagcagtgcttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            |||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1613 acacagcagttcttagttcttgtacttcatggtctccttctcgaatccaattgttgggaa 1554

                                                                        
Query: 262  ttgttttgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 321
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 ttgtttcgcatattcctccacatcgtggcgaagctttgcaatttcagcttggatgttgct 1494

                                                                        
Query: 322  gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 gtcggattgcaaagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaac 1434

                                          
Query: 382  cttcaaagccaagttcactgccgaatcgaa 411
            |||||| |||||||||||||||||||||||
Sbjct: 1433 cttcaaggccaagttcactgccgaatcgaa 1404
to top
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2052

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1675 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1616

                                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1615 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1556

                                                                        
Query: 333  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 392
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1555 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1496

                               
Query: 393  agttcactgccgaatcgaa 411
            |||||||||| | ||||||
Sbjct: 1495 agttcactgctgcatcgaa 1477



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 39   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1876 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1818

                                           
Query: 99   aatg-cttggattccttttacataagatggc 128
            |||| |  || | ||||||||||||||||||
Sbjct: 1817 aatgccaggggtcccttttacataagatggc 1787
to top
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full
            insert sequence
          Length = 1402

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1128 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1069

                                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1068 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1009

                                                                        
Query: 333  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 392
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1008 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 949

                               
Query: 393  agttcactgccgaatcgaa 411
            |||||||||| | ||||||
Sbjct: 948  agttcactgctgcatcgaa 930



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 39   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1329 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1271

                                           
Query: 99   aatgcttggattcc-ttttacataagatggc 128
            |||||  ||  ||| ||||||||||||||||
Sbjct: 1270 aatgccaggggtcccttttacataagatggc 1240
to top
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full
            insert sequence
          Length = 1923

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1598 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1539

                                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1538 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1479

                                                                        
Query: 333  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 392
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1478 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1419

                               
Query: 393  agttcactgccgaatcgaa 411
            |||||||||| | ||||||
Sbjct: 1418 agttcactgctgcatcgaa 1400



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 39   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1799 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1741

                                           
Query: 99   aatg-cttggattccttttacataagatggc 128
            |||| |  || | ||||||||||||||||||
Sbjct: 1740 aatgccaggggtcccttttacataagatggc 1710
to top
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full
            insert sequence
          Length = 1976

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1599 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1540

                                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1539 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1480

                                                                        
Query: 333  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 392
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1479 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1420

                               
Query: 393  agttcactgccgaatcgaa 411
            |||||||||| | ||||||
Sbjct: 1419 agttcactgctgcatcgaa 1401



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 39   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1800 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1742

                                           
Query: 99   aatg-cttggattccttttacataagatggc 128
            |||| |  || | ||||||||||||||||||
Sbjct: 1741 aatgccaggggtcccttttacataagatggc 1711
to top
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full
            insert sequence
          Length = 1844

 Score =  220 bits (111), Expect = 3e-54
 Identities = 177/199 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 1591 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 1532

                                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
            ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 1531 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 1472

                                                                        
Query: 333  aagtggcaacaaagtccttcagtttggtacctgctgctgcagctttaaccttcaaagcca 392
            ||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||||||
Sbjct: 1471 aagtggcaacaaagtccttcagttttgttccacctgctgcagccttaaccttcaaagcca 1412

                               
Query: 393  agttcactgccgaatcgaa 411
            |||||||||| | ||||||
Sbjct: 1411 agttcactgctgcatcgaa 1393



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                        
Query: 39   aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
            |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 1792 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 1734

                                           
Query: 99   aatg-cttggattccttttacataagatggc 128
            |||| |  || | ||||||||||||||||||
Sbjct: 1733 aatgccaggggtcccttttacataagatggc 1703
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  168 bits (85), Expect = 9e-39
 Identities = 130/145 (89%)
 Strand = Plus / Minus

                                                                            
Query: 213      cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
                |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 30011320 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30011261

                                                                            
Query: 273      attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
                ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 30011260 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30011201

                                         
Query: 333      aagtggcaacaaagtccttcagttt 357
                |||||||||||||||||||||||||
Sbjct: 30011200 aagtggcaacaaagtccttcagttt 30011176



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 366      ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaa 411
                |||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 30011026 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaa 30010981



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                            
Query: 39       aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
                |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 30011757 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30011699

                                               
Query: 99       aatgcttggattcc-ttttacataagatggc 128
                |||||  ||  ||| ||||||||||||||||
Sbjct: 30011698 aatgccaggggtcccttttacataagatggc 30011668
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  168 bits (85), Expect = 9e-39
 Identities = 130/145 (89%)
 Strand = Plus / Plus

                                                                         
Query: 213   cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
             |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 96431 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 96490

                                                                         
Query: 273   attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
             ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 96491 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 96550

                                      
Query: 333   aagtggcaacaaagtccttcagttt 357
             |||||||||||||||||||||||||
Sbjct: 96551 aagtggcaacaaagtccttcagttt 96575



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 366   ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaa 411
             |||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 96725 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaa 96770



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                         
Query: 39    aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
             |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 95994 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 96052

                                            
Query: 99    aatg-cttggattccttttacataagatggc 128
             |||| |  || | ||||||||||||||||||
Sbjct: 96053 aatgccaggggtcccttttacataagatggc 96083
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  168 bits (85), Expect = 9e-39
 Identities = 130/145 (89%)
 Strand = Plus / Minus

                                                                            
Query: 213      cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
                |||||||| ||||||||||||| |||||||| || || ||||| ||||| ||||||||||
Sbjct: 30102742 cttagttcttgtacttcatggtttctttctcaaacccaattgtggggaactgttttgcat 30102683

                                                                            
Query: 273      attcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgca 332
                ||||||||||||| |||||||| |||||||| || | ||| |||||||| || |||||||
Sbjct: 30102682 attcctccacatcatggcgaagttttgcaatctcggattgaatgttgctatcagattgca 30102623

                                         
Query: 333      aagtggcaacaaagtccttcagttt 357
                |||||||||||||||||||||||||
Sbjct: 30102622 aagtggcaacaaagtccttcagttt 30102598



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 366      ctgctgcagctttaaccttcaaagccaagttcactgccgaatcgaa 411
                |||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 30102448 ctgctgcagccttaaccttcaaagccaagttcactgctgcatcgaa 30102403



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 77/91 (84%), Gaps = 2/91 (2%)
 Strand = Plus / Minus

                                                                            
Query: 39       aacatcttacagtatgtgcctgcaataagaaactattgacaaagttcccatattctgtaa 98
                |||||||||||||| ||| || | ||||||| |||||||||||||| ||| |  ||||||
Sbjct: 30103179 aacatcttacagtaggtgtctacgataagaa-ctattgacaaagtttccacacgctgtaa 30103121

                                               
Query: 99       aatg-cttggattccttttacataagatggc 128
                |||| |  || | ||||||||||||||||||
Sbjct: 30103120 aatgccaggggtcccttttacataagatggc 30103090
to top
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence
          Length = 1476

 Score =  165 bits (83), Expect = 1e-37
 Identities = 127/141 (90%), Gaps = 3/141 (2%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcata 273
            ||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||| |
Sbjct: 1231 ttagttcttgtatttcatggtctctttctcaaatccaattgttgggaattgttttgcaaa 1172

                                                                        
Query: 274  ttcctccacatcgtggcgaagctttgcaatttcagcttggatgttgctgtcggattgcaa 333
            |||||| ||||| ||||||||||||||||| ||| ||||||   |||| || ||||||||
Sbjct: 1171 ttcctctacatcatggcgaagctttgcaatctcaacttgga---tgctatcagattgcaa 1115

                                 
Query: 334  agtggcaacaaagtccttcag 354
            |||||||||||||||||||||
Sbjct: 1114 agtggcaacaaagtccttcag 1094
to top
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1779

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                        
Query: 222  tgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcca 281
            |||| |||||||| |||||||| || |||||||||||||||||||| ||||| |||||||
Sbjct: 1570 tgtatttcatggtttctttctcaaacccgattgttgggaattgtttggcatactcctcca 1511

                                     
Query: 282  catcgtggcgaagctttgcaatttc 306
            | |||||||| ||||||| ||||||
Sbjct: 1510 cgtcgtggcgtagctttgaaatttc 1486
to top
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase
          Length = 1746

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 89/104 (85%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||  |||| |||||||| |||||||| ||||||||||| ||||||||||| || |
Sbjct: 1588 cttagtttttgtatttcatggtttctttctcaaatccgattgtcgggaattgtttcgcgt 1529

                                                        
Query: 273  attcctccacatcgtggcgaagctttgcaatttcagcttggatg 316
            |||||||||| || ||||| |||||||  ||||| | |||||||
Sbjct: 1528 attcctccacgtcatggcgtagctttgagatttctgattggatg 1485
to top
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase
          Length = 1745

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  cttagttcctgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcat 272
            |||||||  ||||||||||||| |||||||| || || ||||| ||||| || || ||||
Sbjct: 1563 cttagtttttgtacttcatggtttctttctcaaacccaattgtagggaactgcttagcat 1504

                                                
Query: 273  attcctccacatcgtggcgaagctttgcaatttcag 308
            | ||||||||||| || || || |||||||||||||
Sbjct: 1503 actcctccacatcatgacggagttttgcaatttcag 1468
to top
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557
          Length = 87695

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 254  gttgggaattgttttgcatattcctccacatcgtggcgaagctttgcaat 303
            ||||| || ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 7546 gttggaaactgtttcgcatactcctcaacatcgtggcgaagctttgcaat 7497
to top
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541,
             complete sequence
          Length = 110985

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 254   gttgggaattgttttgcatattcctccacatcgtggcgaagctttgcaat 303
             ||||| || ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 95149 gttggaaactgtttcgcatactcctcaacatcgtggcgaagctttgcaat 95100
to top
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1);
            glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA,
            complete cds
          Length = 1822

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1677 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1630
to top
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88
          Length = 198493

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 214    ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
              ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 134324 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 134371
to top
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 214   ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
             ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 19909 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 19956
to top
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1
            gene)
          Length = 1797

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1653 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1606
to top
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1775

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
to top
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1716

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1607 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1560
to top
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1730

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1608 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1561
to top
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds
          Length = 1770

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1661 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1614
to top
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds
          Length = 1554

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1554 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1507
to top
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1771

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1650 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1603
to top
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence
          Length = 1725

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 214  ttagttcctgtacttcatggtctctttctcgaatccgattgttgggaa 261
            ||||||| ||||||||||||| |||||||| || || |||||||||||
Sbjct: 1616 ttagttcttgtacttcatggtttctttctcaaacccaattgttgggaa 1569
to top
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.2 mRNA, complete cds
          Length = 1966

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
to top
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.3 mRNA, complete cds
          Length = 2072

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1692 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1644
to top
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780
            transcript variant AT5G26780.1 mRNA, complete cds
          Length = 1962

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1644 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1596
to top
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine
            hydroxymethyltransferase (At5g26780) mRNA, complete cds
          Length = 1633

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
to top
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase
            (At5g26780) mRNA, complete cds
          Length = 1933

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1643 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1595
to top
>dbj|AK220785.1| Arabidopsis thaliana mRNA for glycine hydroxymethyltransferase
           -like protein, complete cds, clone: RAFL22-26-M08
          Length = 909

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 228 tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
           |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 552 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 504
to top
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence
          Length = 110946

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 228   tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
             |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 23145 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 23097
to top
>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZG06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1960

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1639 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1591
to top
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine
            hydroxymethyltransferase (At5g26780) mRNA, complete cds
          Length = 1633

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 228  tcatggtctctttctcgaatccgattgttgggaattgttttgcatattc 276
            |||| |||||||||||||| || || ||||||||||| || ||||||||
Sbjct: 1588 tcatcgtctctttctcgaacccaatcgttgggaattgcttagcatattc 1540
to top
>gb|AC129335.4| Mus musculus BAC clone RP23-109H7 from chromosome 1, complete sequence
          Length = 201274

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 375   ctttaaccttcaaagccaagtt 396
             ||||||||||||||||||||||
Sbjct: 32135 ctttaaccttcaaagccaagtt 32114
to top
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 170    ttgtgcttcctgtttgcttcct 191
              ||||||||||||||||||||||
Sbjct: 194735 ttgtgcttcctgtttgcttcct 194756
to top
>gb|AF416481.1|AF416481 Cicer arietinum hydroxymethyl transferase mRNA, partial cds
          Length = 284

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 222 tgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctc 279
           |||||||||||||  |||| || || || || ||||| |||||||||||| |||||||
Sbjct: 67  tgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaattcctc 10
to top
>gb|AC153848.5| Mus musculus 6 BAC RP23-111L15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187830

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 170   ttgtgcttcctgtttgcttcct 191
             ||||||||||||||||||||||
Sbjct: 54206 ttgtgcttcctgtttgcttcct 54227
to top
>gb|AC113269.13| Mus musculus chromosome 15, clone RP23-372F2, complete sequence
          Length = 202155

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 173   tgcttcctgtttgcttccttgctgt 197
             |||||||||||||||||| ||||||
Sbjct: 70853 tgcttcctgtttgcttccgtgctgt 70877
to top
>emb|AL121870.9|HSB166C10 Human DNA sequence from clone RP13-166C10 on chromosome Xq21.1-21.3,
              complete sequence
          Length = 122049

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 303    tttcagcttggatgttgctgt 323
              |||||||||||||||||||||
Sbjct: 104450 tttcagcttggatgttgctgt 104470
to top
>emb|AL031985.10|HS228H13 Human DNA sequence from clone RP1-228H13 on chromosome 1p34.1-35.3
              Contains the gene for a novel protein, a ribosomal protein
              L21 (RPL21), a ribosomal protein L10a (RPL10A) and the gene
              for a novel zinc finger protein, complete sequence
          Length = 139737

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 171    tgtgcttcctgtttgcttcct 191
              |||||||||||||||||||||
Sbjct: 105621 tgtgcttcctgtttgcttcct 105601
to top
>gb|AC012077.4|AC012077 Homo sapiens BAC clone RP11-524G14 from Y, complete sequence
          Length = 209287

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 303    tttcagcttggatgttgctgt 323
              |||||||||||||||||||||
Sbjct: 169390 tttcagcttggatgttgctgt 169410
to top
>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   ctgtttgcttccttgctgtt 198
             ||||||||||||||||||||
Sbjct: 85155 ctgtttgcttccttgctgtt 85174
to top
>ref|XM_745127.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04710)
           partial mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 185 gcttccttgctgttgaaacacagc 208
           |||||||||| |||||||||||||
Sbjct: 35  gcttccttgcagttgaaacacagc 12
to top
>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence
          Length = 12999

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 288  ggcgaagctttgcaatttcagctt 311
            |||||||||| |||||||||||||
Sbjct: 7977 ggcgaagcttggcaatttcagctt 8000
to top
>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence
          Length = 165863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   gaagctttgcaatttcagct 310
             ||||||||||||||||||||
Sbjct: 21826 gaagctttgcaatttcagct 21807
to top
>ref|XM_781957.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10275-PA
            (LOC581980), mRNA
          Length = 7047

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 200  aaacacagcagtgcttagttcctg 223
            ||||||||||||||||| ||||||
Sbjct: 4444 aaacacagcagtgcttacttcctg 4467
to top
>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A)
          Length = 11621

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  ggcgaagctttgcaatttcagctt 311
            |||||||||| |||||||||||||
Sbjct: 7886 ggcgaagcttggcaatttcagctt 7863
to top
>emb|BX323797.10| Zebrafish DNA sequence from clone DKEY-78A14 in linkage group 7,
             complete sequence
          Length = 101349

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    tcatatagcatatcagcgaaacat 43
             ||||||||||||||| ||||||||
Sbjct: 70623 tcatatagcatatcatcgaaacat 70600
to top
>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family
            member (myo-3) (myo-3) mRNA, complete cds
          Length = 6059

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  ggcgaagctttgcaatttcagctt 311
            |||||||||| |||||||||||||
Sbjct: 3565 ggcgaagcttggcaatttcagctt 3542
to top
>gb|AC155267.1| Mus musculus BAC clone RP23-248M19 from chromosome 13, complete
             sequence
          Length = 178290

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   gaagctttgcaatttcagct 310
             ||||||||||||||||||||
Sbjct: 83245 gaagctttgcaatttcagct 83226
to top
>dbj|AB010698.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPL12
          Length = 87434

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tgcctgcaataagaaactat 74
             ||||||||||||||||||||
Sbjct: 54636 tgcctgcaataagaaactat 54617
to top
>gb|AC009294.8|AC009294 Homo sapiens chromosome 11, clone 579_H_17, complete sequence
          Length = 211316

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     aagaaactattgacaaagtt 84
              ||||||||||||||||||||
Sbjct: 122669 aagaaactattgacaaagtt 122650
to top
>dbj|AP003460.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-285P16, complete
              sequence
          Length = 171738

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     aagaaactattgacaaagtt 84
              ||||||||||||||||||||
Sbjct: 164989 aagaaactattgacaaagtt 165008
to top
>gb|BC084962.1| Xenopus laevis hypothetical LOC495440, mRNA (cDNA clone MGC:84058
           IMAGE:6948237), complete cds
          Length = 6578

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 acctgctgctgcagctttaa 380
           ||||||||||||||||||||
Sbjct: 240 acctgctgctgcagctttaa 221
to top
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds
          Length = 1803

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 222  tgtacttcatggtctctttctcgaatccgattgttgggaattgttttgcatattcctcca 281
            |||||||||||||  |||| || || || || ||||| |||||||||||| | ||||| |
Sbjct: 1570 tgtacttcatggttgctttttcaaaaccaatggttggaaattgttttgcaaactcctcaa 1511

                
Query: 282  catc 285
            ||||
Sbjct: 1510 catc 1507
to top
>dbj|AB002815.1| Perilla frutescens mRNA for chalcone synthase, complete cds
          Length = 1449

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 352  cagtttggtacctgctgctg 371
            ||||||||||||||||||||
Sbjct: 1203 cagtttggtacctgctgctg 1222


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,319,529
Number of Sequences: 3902068
Number of extensions: 4319529
Number of successful extensions: 112674
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112494
Number of HSP's gapped (non-prelim): 162
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top