ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart15e09 |
|---|---|
| Clone Library Name | barley_pub |
>RETO_ESCCA (P30986) Reticuline oxidase precursor (EC 1.21.3.3)| (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) Length = 538 Score = 99.4 bits (246), Expect = 4e-21 Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 9/127 (7%) Frame = -2 Query: 456 RVGSIADGDTPYPHRSGVLYNIQYVAFWTGNG----TDGPNWISGLYNFMEPFVSKNPRG 289 ++ I+ TP+PHRSG ++Y+ W + T+ +W+ +Y FM+PFVSKNPR Sbjct: 395 QMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRL 454 Query: 288 AYVNYRDLDI-----GENTVVGGVTSYETGKVWGESYFGANFQRLAVTKGKVDASDYFRN 124 YVN+ DLD+ G TVV + E + WGESYF +N++RL K +D ++ F + Sbjct: 455 GYVNHIDLDLGGIDWGNKTVVN--NAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNH 512 Query: 123 EQSVPPL 103 QS+PP+ Sbjct: 513 PQSIPPM 519
>RETO_PAPSO (P93479) Reticuline oxidase precursor (EC 1.21.3.3)| (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) Length = 535 Score = 91.3 bits (225), Expect = 1e-18 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%) Frame = -2 Query: 456 RVGSIADGDTPYPHRSGVLYNIQYVAFWTGNGT----DGPNWISGLYNFMEPFVSKNPRG 289 ++ I+ TP+PHR G +Y+ W + + W++ Y+++EPFVSK PR Sbjct: 399 KMSEISTDFTPFPHRKGTKLMFEYIIAWNQDEESKIGEFSEWLAKFYDYLEPFVSKEPRV 458 Query: 288 AYVNYRDLDIGE---NTVVGGVTSYETGKVWGESYFGANFQRLAVTKGKVDASDYFRNEQ 118 YVN+ DLDIG + E + WGE YF +N++RL K +D ++ F + Q Sbjct: 459 GYVNHIDLDIGGIDWRNKSSTTNAVEIARNWGERYFSSNYERLVKAKTLIDPNNVFNHPQ 518 Query: 117 SVPPLL 100 S+PP++ Sbjct: 519 SIPPMM 524
>CYF_PINTH (P41619) Apocytochrome f precursor| Length = 319 Score = 32.7 bits (73), Expect = 0.45 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG+VS L +EK Y + + V G L + +GE ++V +T P+L G Sbjct: 210 TGRVSKILRKEKGGYEITIDNTSDGGQVVDIVPPGPELLISEGELIKVDQPLTNNPNLGG 269 Query: 220 FVAGD 234 F GD Sbjct: 270 FGQGD 274
>CYF_PSINU (Q8WI07) Apocytochrome f precursor| Length = 321 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Frame = +1 Query: 73 GQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAGF 222 G+V+ L REK Y + + + V G L + +GE +++ +T P+L GF Sbjct: 213 GKVTKILRREKGGYEITIEDTLEGRRVVDIVPPGPELIISEGEFIKIDQPLTNNPNLGGF 272 Query: 223 VAGDT 237 GDT Sbjct: 273 GQGDT 277
>CYF_MARPO (P06246) Apocytochrome f precursor| Length = 320 Score = 32.7 bits (73), Expect = 0.45 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSEV----------VAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG+VS +EK Y + + ++ AG L + +GE ++V +T P++ G Sbjct: 211 TGKVSKIFRKEKGGYEITIDDISDGHKVVDISAAGPELIISEGELVKVDQPLTNNPNVGG 270 Query: 220 FVAGD 234 F GD Sbjct: 271 FGQGD 275
>CYF_PINKO (Q85X29) Apocytochrome f precursor| Length = 319 Score = 32.0 bits (71), Expect = 0.76 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG+VS L +EK Y + + V G L + +GE ++V +T P++ G Sbjct: 210 TGRVSKILRKEKGGYEITIDNKSDGGQVVDIVPPGPELLISEGELIKVDQPLTNNPNMGG 269 Query: 220 FVAGD 234 F GD Sbjct: 270 FGQGD 274
>CYF_PICAB (O47042) Apocytochrome f precursor| Length = 319 Score = 31.6 bits (70), Expect = 0.99 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG+VS L +EK Y + + V G L + +GE ++V +T P++ G Sbjct: 210 TGRVSKILRKEKGGYEITIDNTSDGGQVVDIVPPGPELLISEGELIKVDQPLTNNPNVGG 269 Query: 220 FVAGD 234 F GD Sbjct: 270 FGQGD 274
>CYF_HUPLU (Q5SD39) Apocytochrome f precursor| Length = 320 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYAL----------LVSEVVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG+VS +EK Y + +V V G L + +GE ++V +T P++ G Sbjct: 211 TGRVSKISRKEKGGYEITVENTLDGRSVVDTVPPGPELIISEGESIKVDQPLTNNPNVGG 270 Query: 220 FVAGD 234 F GD Sbjct: 271 FGQGD 275
>PHT13_ARATH (O48639) Inorganic phosphate transporter 1-3 (AtPht1;3) (H(+)/Pi| cotransporter) Length = 521 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/92 (20%), Positives = 38/92 (41%) Frame = -2 Query: 447 SIADGDTPYPHRSGVLYNIQYVAFWTGNGTDGPNWISGLYNFMEPFVSKNPRGAYVNYRD 268 S+A G + GV+ + + FW G G G +S M + +K RGA++ Sbjct: 112 SVASGLSLGNSAKGVMTTLCFFRFWLGFGIGGDYPLSA--TIMSEYANKKTRGAFIAAVF 169 Query: 267 LDIGENTVVGGVTSYETGKVWGESYFGANFQR 172 G + GG + ++ + + +++ Sbjct: 170 AMQGVGILAGGFVALAVSSIFDKKFPSPTYEQ 201
>PHT12_ARATH (Q96243) Inorganic phosphate transporter 1-2 (AtPht1;2) (H(+)/Pi| cotransporter) Length = 524 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/85 (22%), Positives = 35/85 (41%) Frame = -2 Query: 447 SIADGDTPYPHRSGVLYNIQYVAFWTGNGTDGPNWISGLYNFMEPFVSKNPRGAYVNYRD 268 S+A G + GV+ + + FW G G G +S M + +K RGA++ Sbjct: 112 SVASGLSFGNEAKGVMTTLCFFRFWLGFGIGGDYPLSA--TIMSEYANKKTRGAFIAAVF 169 Query: 267 LDIGENTVVGGVTSYETGKVWGESY 193 G + GG + ++ + + Sbjct: 170 AMQGVGILAGGFVALAVSSIFDKKF 194
>PHT11_ARATH (Q8VYM2) Inorganic phosphate transporter 1-1 (AtPht1;1) (H(+)/Pi| cotransporter) Length = 524 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/85 (22%), Positives = 35/85 (41%) Frame = -2 Query: 447 SIADGDTPYPHRSGVLYNIQYVAFWTGNGTDGPNWISGLYNFMEPFVSKNPRGAYVNYRD 268 S+A G + GV+ + + FW G G G +S M + +K RGA++ Sbjct: 112 SVASGLSFGHEAKGVMTTLCFFRFWLGFGIGGDYPLSA--TIMSEYANKKTRGAFIAAVF 169 Query: 267 LDIGENTVVGGVTSYETGKVWGESY 193 G + GG + ++ + + Sbjct: 170 AMQGVGILAGGFVALAVSSIFDKKF 194
>CYF_ANTFO (Q85AR2) Apocytochrome f precursor| Length = 322 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG + L +EK Y +++ V G L + +GE ++V +T P++ G Sbjct: 213 TGIIKKVLRKEKGGYEIIIDNTLDGRQVIDIVPPGPELIISEGESIKVDQPLTNNPNVGG 272 Query: 220 FVAGD 234 F GD Sbjct: 273 FGQGD 277
>NIA2_MAIZE (P39871) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) (NR) (Fragment)| Length = 231 Score = 29.6 bits (65), Expect = 3.8 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Frame = +1 Query: 61 RL*TGQVSPSLPREKWRYAL-LVSEVVAGVHLPLGDGEPLEV--GP----EVTLTPHL 213 RL V +P + W Y + V E V HLPLGD E + + GP E T+ P L Sbjct: 160 RLKVWYVVSKVPEDGWEYGVGRVDEHVMREHLPLGDSETIALVCGPPAMIECTVRPGL 217
>AOSL_PLEHO (O16025) Allene oxide synthase-lipoxygenase protein [Includes:| Allene oxide synthase (EC 4.2.1.92) (Hydroperoxidehydrase); Arachidonate 8-lipoxygenase (EC 1.13.11.40)] Length = 1066 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Frame = -2 Query: 351 PNWISGLYNFME---PFVSKNPRGAYVNYR----DLDIGENTVVGGVTSYETGKVW 205 P+ + LY + + PF +K+ + Y YR D+DI E G +T E K+W Sbjct: 184 PDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDESGRLTEEEQRKIW 239
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Frame = -2 Query: 417 HRSGVLYNIQYVAFWTGNGTDGPNWISGLYNFMEPFVSKNPRGAYVNYRDLDIGENTVVG 238 H Y+ Q FW N +GP + +GLY+F F NP G Sbjct: 20 HDGRTAYHFQPAKFWQ-NDPNGPLYHNGLYHF---FYQYNPHGPL--------------- 60 Query: 237 GVTSYETGKV-WGESYFG 187 ++TGK+ WG S G Sbjct: 61 ----WDTGKLSWGHSVSG 74
>SYI_HELHP (Q7VGX8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 930 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 134 TSETSRAYRHFSRGSEGETWPVYNLRT*NCSSGYGLE 24 T A+RH S +GE +++L +C+ GY LE Sbjct: 778 TYTADEAFRHSSAALKGEYESIFDLPKLSCAQGYNLE 814
>EVPL_HUMAN (Q92817) Envoplakin (210 kDa paraneoplastic pemphigus antigen) (p210)| (210 kDa cornified envelope precursor protein) Length = 2033 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Frame = -1 Query: 199 ELLRGQLPEARR------HQGEGGRQRLLQKRAERTATSLEEVKV 83 E L+ QL E R+ H+ E R +LLQ R +R LEE +V Sbjct: 915 EALKAQLEEERKRVARVQHELEAQRSQLLQLRTQRPLERLEEKEV 959
>CYF_PHOLA (P95522) Apocytochrome f precursor| Length = 338 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +1 Query: 121 LVSEVVAGVHLPLGDGEPLEVGPEVTLTPHLAGFVAGDT 237 +V ++ AG L + +GE + G +T P++ GF DT Sbjct: 248 IVDKIPAGPELIVSEGEEVAAGAALTNNPNVGGFGQKDT 286
>CYF_PEA (P00155) Apocytochrome f precursor| Length = 320 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLV------SEVV----AGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG V + +EK Y + + SEV+ G L + +GE +++ +T P++ G Sbjct: 211 TGVVKQIIRKEKGGYEITIVDASDGSEVIDIIPPGPELLVSEGESIKLDQPLTSNPNVGG 270 Query: 220 FVAGD 234 F GD Sbjct: 271 FGQGD 275
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 427 AVPSPERRPLQHPVRGVLDGQRHGRAE 347 A P PE+ +Q P RG HGR+E Sbjct: 921 AAPPPEQEGVQRPPRGSQSADTHGRSE 947
>CYF_PHYPA (Q6YXL3) Apocytochrome f precursor| Length = 319 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = +1 Query: 73 GQVSPSLPREKWRYAL---------LVSEVVAGVHLPLGDGEPLEVGPEVTLTPHLAGFV 225 G VS +EK Y + +V V AG L + +GE ++ +T P++ GF Sbjct: 212 GTVSKIFRKEKGGYEITIDTQDGRQIVDIVPAGPELIISEGELIKADQPLTNNPNVGGFG 271 Query: 226 AGD 234 GD Sbjct: 272 QGD 274
>ADO_HUMAN (Q06278) Aldehyde oxidase (EC 1.2.3.1)| Length = 1338 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = -2 Query: 321 MEPFVSKNPRGAYVNYRDLDIGEN---TVVGGVTSYETGKVW 205 +EP +SKNP+G + ++ E+ + VG YE+ W Sbjct: 1110 LEPIISKNPKGTWKDWAQTAFDESINLSAVGYFRGYESDMNW 1151
>CYF_VICFA (P06669) Apocytochrome f precursor| Length = 320 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Frame = +1 Query: 70 TGQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAG 219 TG V+ + +EK Y + + + + G L + +GE +++ +T P++ G Sbjct: 211 TGVVNKKIRKEKGGYEITIVDGSDGREVIDIIPPGPELLVSEGESIKLDQPLTSNPNVGG 270 Query: 220 FVAGD 234 F GD Sbjct: 271 FGQGD 275
>CYF_OENHO (P04658) Apocytochrome f precursor| Length = 318 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 10/64 (15%) Frame = +1 Query: 73 GQVSPSLPREKWRYALLVSE----------VVAGVHLPLGDGEPLEVGPEVTLTPHLAGF 222 G VS + +EK Y + +++ + +G L + +GE +++ +T P++ GF Sbjct: 210 GIVSKIIRKEKGGYEITITDASDGRQVVDIIPSGPELLVSEGESIKLDQPLTSNPNVGGF 269 Query: 223 VAGD 234 GD Sbjct: 270 GQGD 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,433,144 Number of Sequences: 219361 Number of extensions: 1117671 Number of successful extensions: 3493 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3426 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3488 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
