ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein 634 e-179
2gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence 86 9e-14
3gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence 86 9e-14
4gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker 86 9e-14
5gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker 86 9e-14
6gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-... 86 9e-14
7emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein 86 9e-14
8gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein... 86 9e-14
9gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein... 86 9e-14
10gb|AY103580.1| Zea mays PCO072544 mRNA sequence 86 9e-14
11gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRN... 78 2e-11
12emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complet... 72 1e-09
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
14dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
15dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
16dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
17dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
18dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
19gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 72 1e-09
20dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for ... 72 1e-09
21emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for p... 70 5e-09
22ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predic... 62 1e-06
23emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 62 1e-06
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
25gb|AY170841.1| Axonopus compressus plasma membrane MIP protein m... 62 1e-06
26dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
27dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
28dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
29dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
30gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein ... 60 5e-06
31dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds 56 8e-05
32gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putat... 54 3e-04
33dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds 50 0.005
34gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, c... 48 0.019
35gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma... 48 0.019
36gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mR... 46 0.074
37emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein 46 0.074
38emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative pl... 46 0.074
39emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp... 46 0.074
40gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds 46 0.074
41gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, co... 46 0.074
42emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chro... 46 0.074
43dbj|AB002149.1| Nicotiana excelsior mRNA for water channel prote... 46 0.074
44gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.29
45emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1... 44 0.29
46emb|AL138758.7| Human DNA sequence from clone RP5-824O18 on chro... 42 1.2
47gb|AC093117.2| Homo sapiens chromosome 1 clone RP11-86H7, comple... 42 1.2
48gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Canc... 42 1.2
49gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Can... 42 1.2
50ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G4... 40 4.6
51ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed... 40 4.6
52ref|NM_001005210.1| Homo sapiens leucine rich repeat containing ... 40 4.6
53gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic... 40 4.6
54gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome... 40 4.6
55gb|AC126028.4| Mus musculus BAC clone RP24-542M6 from chromosome... 40 4.6
56gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Can... 40 4.6
57gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complet... 40 4.6
58emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chro... 40 4.6
59emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037... 40 4.6
60gb|AC163448.2| Mus musculus chromosome 1, clone RP24-327O21, com... 40 4.6
61emb|CR354559.6| Zebrafish DNA sequence from clone CH211-210F24 i... 40 4.6
62emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein 40 4.6
63emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel... 40 4.6
64emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel... 40 4.6
65gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (... 40 4.6
66emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A 40 4.6
67gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma m... 40 4.6
68emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in ... 40 4.6
69emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 i... 40 4.6
70gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromo... 40 4.6
71dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443 40 4.6
72gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 4.6
73gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map... 40 4.6
74gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, co... 40 4.6
75gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putat... 40 4.6
76gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 40 4.6
77dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial... 40 4.6
78gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205),... 40 4.6
79gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, ... 40 4.6
80gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, ... 40 4.6
81emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Co... 40 4.6
82emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Co... 40 4.6
83emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Co... 40 4.6
84emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Co... 40 4.6
85gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, compl... 40 4.6
86gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, comp... 40 4.6
87emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 i... 40 4.6
88emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene 40 4.6
89dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.6
90gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte... 40 4.6
91gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, compl... 40 4.6
92dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane ... 40 4.6 
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score =  634 bits (320), Expect = e-179
 Identities = 335/340 (98%)
 Strand = Plus / Minus

                                                                        
Query: 7    aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 66
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 aacaactttgctggatttgcacaacaacgagcagtactacacaacaactgagcactgatg 1140

                                                                        
Query: 67   agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagc 126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1139 agattacatacaagtcctctgtctgggttcaggtgaatacagagcaagagcaagagtagt 1080

                                                                        
Query: 127  acatcaaacttggaagacaaattggaattccacggtaacacggacgatgggaagagaggg 186
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1079 acatcaaacttggaagacaaattggaattccacggtaacagggacgatgggaagagaggg 1020

                                                                        
Query: 187  ccgcccccatcaaaaagaaattcactcaaaacacgcagtttgctcttcgggttgggatgg 246
            |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1019 ccgcccccatcagaaagaaattcactcagaacacgcagtttgctcttcgggttgggatgg 960

                                                                        
Query: 247  catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  catctttctttgtagcagcagcttaggacttggtcttgaatgggatcgctctgatgacca 900

                                                    
Query: 307  cctggtggtaaatggcggccagcgcggcgccgatgaaggg 346
            |||||||||| |||||||||||||||||||||||||||||
Sbjct: 899  cctggtggtagatggcggccagcgcggcgccgatgaaggg 860
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>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence
          Length = 1154

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 834 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 775

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| |||||||||||||||||
Sbjct: 774 gccagggcggcgccgatgaaggg 752
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>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence
          Length = 698

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| |||||||
Sbjct: 425 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 366

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 365 tgaaggg 359
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>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker
          Length = 824

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 244 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 303

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| |||||||||||||||||
Sbjct: 304 gccagggcggcgccgatgaaggg 326
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>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker
          Length = 763

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 533 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 474

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| |||||||||||||||||
Sbjct: 473 gccagggcggcgccgatgaaggg 451
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>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete
           cds
          Length = 1086

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| |||||||
Sbjct: 856 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 797

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 796 tgaaggg 790
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>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein
          Length = 1169

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||||| |||||||||||| ||||| |||||||| |||||||
Sbjct: 913 tcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccga 854

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 853 tgaaggg 847
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>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete
           cds
          Length = 1153

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 984 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 925

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| |||||||||||||||||
Sbjct: 924 gccagggcggcgccgatgaaggg 902
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>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete
           cds
          Length = 1296

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 979 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 920

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| |||||||||||||||||
Sbjct: 919 gccagggcggcgccgatgaaggg 897
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>gb|AY103580.1| Zea mays PCO072544 mRNA sequence
          Length = 1633

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 264  gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
            |||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| 
Sbjct: 1308 gcagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggca 1249

                                   
Query: 324  gccagcgcggcgccgatgaaggg 346
            ||||| |||||||||||||||||
Sbjct: 1248 gccagggcggcgccgatgaaggg 1226
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>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds
          Length = 1280

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 264 gcagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcg 323
           |||||||| ||| || ||||||| ||||| |||||||||| |||||||||||| ||||| 
Sbjct: 935 gcagcttaagacctgctcttgaacgggatggctctgatgatcacctggtggtagatggca 876

                                  
Query: 324 gccagcgcggcgccgatgaaggg 346
           ||||| || ||||| ||||||||
Sbjct: 875 gccagggcagcgccaatgaaggg 853
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>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS
          Length = 1139

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 896 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 837

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 836 agggcagcgccaacgaaggg 817
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 267      gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
                ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 27065653 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 27065594

                                    
Query: 327      agcgcggcgccgatgaaggg 346
                || || ||||| | ||||||
Sbjct: 27065593 agggcagcgccaacgaaggg 27065574
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 267   gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
             ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 37302 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 37243

                                 
Query: 327   agcgcggcgccgatgaaggg 346
             || || ||||| | ||||||
Sbjct: 37242 agggcagcgccaacgaaggg 37223
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 267    gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
              ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 118855 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 118796

                                  
Query: 327    agcgcggcgccgatgaaggg 346
              || || ||||| | ||||||
Sbjct: 118795 agggcagcgccaacgaaggg 118776
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>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 869 agggcagcgccaacgaaggg 850
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>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
           insert sequence
          Length = 1205

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 984 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 925

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 924 agggcagcgccaacgaaggg 905
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>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 929 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 870

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 869 agggcagcgccaacgaaggg 850
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>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 924 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 865

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 864 agggcagcgccaacgaaggg 845
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>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel
           protein, complete cds
          Length = 1116

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 267 gcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcggcc 326
           ||||| ||| || |||||||||||||||| ||||||| |||||||||||| ||||| |||
Sbjct: 927 gcttaagacctgctcttgaatgggatcgccctgatgatcacctggtggtagatggcagcc 868

                               
Query: 327 agcgcggcgccgatgaaggg 346
           || || ||||| | ||||||
Sbjct: 867 agggcagcgccaacgaaggg 848
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>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin
          Length = 1291

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 308  ctggtggtaaatggcggccagcgcggcgccgatgaaggg 346
            ||||||||| |||||||||||||||||||||||||||||
Sbjct: 1291 ctggtggtagatggcggccagcgcggcgccgatgaaggg 1253
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>ref|XM_473480.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 838 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 779

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 778 tgaaggg 772
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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 280   tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
             |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 28669 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28610

                    
Query: 340   tgaaggg 346
             |||||||
Sbjct: 28609 tgaaggg 28603
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                            
Query: 280      tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
                |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 28021443 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 28021384

                       
Query: 340      tgaaggg 346
                |||||||
Sbjct: 28021383 tgaaggg 28021377
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>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds
          Length = 423

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           ||||||| ||||| || ||||||| |||||||||||| |||||||| || || ||||| |
Sbjct: 412 tcttgaacgggatggccctgatgatcacctggtggtagatggcggctagggcagcgccaa 353

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 352 tgaaggg 346
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>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full
           insert sequence
          Length = 1163

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 915 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 856

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 855 tgaaggg 849
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>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full
           insert sequence
          Length = 1164

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 916 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 857

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 856 tgaaggg 850
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>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full
           insert sequence
          Length = 1167

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 918 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 859

                  
Query: 340 tgaaggg 346
           |||||||
Sbjct: 858 tgaaggg 852
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>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full
            insert sequence
          Length = 1462

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 280  tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
            |||||||||| || || |||||||||||||||||||| ||||| || || || ||||| |
Sbjct: 1214 tcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgccaa 1155

                   
Query: 340  tgaaggg 346
            |||||||
Sbjct: 1154 tgaaggg 1148
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>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds
          Length = 539

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                       
Query: 265 cagcttaggacttggtcttgaatgggatcgctctgatgaccacctggtggtaaatggcgg 324
           ||||||| ||| || ||||||| ||||| || ||||||| |||||||||||| ||||| |
Sbjct: 359 cagcttaagacctgctcttgaacgggatggccctgatgatcacctggtggtagatggcag 300

                                 
Query: 325 ccagcgcggcgccgatgaaggg 346
           |||| || || || ||||||||
Sbjct: 299 ccagggcagcaccaatgaaggg 278
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>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
          Length = 1285

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggcggccagcgcggcgccga 339
           ||||||| |||||||| ||||| ||||||  |||||| || || |||||||| |||||||
Sbjct: 945 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 886

               
Query: 340 tgaa 343
           ||||
Sbjct: 885 tgaa 882
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>gb|AF141643.1|AF141643 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-1
           (PIP1-1) mRNA, complete cds
          Length = 1115

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 274 acttggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||| |||||| || || |||||||||||||||||||||||
Sbjct: 887 acttggacttgaagggaatggctctgatgaccacctggtggta 845
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>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds
          Length = 1147

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 294 gctctgatgaccacctggtggtaaatggcggccagcgcggcgccgatgaaggg 346
           |||||||||| |||||||||||| | ||| ||||| |||||||| | ||||||
Sbjct: 927 gctctgatgatcacctggtggtagacggctgccagggcggcgccaacgaaggg 875
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>gb|AY547266.2| Ipomoea nil aquaporin-like protein (AQP1) mRNA, complete cds
          Length = 1189

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||| |||||||| || |||||||||||
Sbjct: 937 cttgaatgggatggctctgatcacaacctggtggta 902
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>gb|AF188843.1|AF188843 Vitis vinifera cultivar Pinot Noir plasma membrane aquaporin
           (PIP1a) mRNA, complete cds
          Length = 1129

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 277 tggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||||||| |||||||| || | |||||||||
Sbjct: 907 tggtcttgaatgggatggctctgattactatctggtggta 868
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>gb|AY611006.1| Xerophyta humilis isolate HC398 PIP1 aquaporin mRNA, partial cds
          Length = 502

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 282 ttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| ||||| ||||||||||| |||||||||||
Sbjct: 176 ttgaaggggattgctctgatgacgacctggtggta 142
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>emb|Y08962.1|OSTRAMBPR O.sativa mRNA for transmembrane protein
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggc 322
           |||||||||| || || ||||| ||| ||||||||||||||||
Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggc 888
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>emb|AJ314584.1|POC314584 Posidonia oceanica mRNA for putative plasma membrane intrinsic
           protein (pip1a gene)
          Length = 1139

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 278 ggtcttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||| || ||||||||||| | |||||||||
Sbjct: 874 ggtcttgaatggaattgctctgatgactatctggtggta 836
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>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene)
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 274 acttggtcttgaatgggatcgctctgatgaccacc 308
           ||||| ||||||||||||| |||||||| ||||||
Sbjct: 847 acttgttcttgaatgggatagctctgatcaccacc 813
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>gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds
          Length = 1262

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 282 ttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| ||||| ||||||||||| |||||||||||
Sbjct: 936 ttgaaggggattgctctgatgacgacctggtggta 902
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>gb|U77297.1|OSU77297 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 280 tcttgaatgggatcgctctgatgaccacctggtggtaaatggc 322
           |||||||||| || || ||||| ||| ||||||||||||||||
Sbjct: 930 tcttgaatggaattgccctgataaccccctggtggtaaatggc 888
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>emb|AL772318.6| Mouse DNA sequence from clone RP23-77I17 on chromosome 4, complete
              sequence
          Length = 249534

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 84     tctgtctgggttcaggtgaatacagag 110
              ||||||||||| |||||||||||||||
Sbjct: 225070 tctgtctgggtacaggtgaatacagag 225044
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>dbj|AB002149.1| Nicotiana excelsior mRNA for water channel protein, complete cds
          Length = 1064

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 276 ttggtcttgaatgggatcgctctgatgaccacctggtggtaaa 318
           |||||||||||||| || ||||||||||  | |||||||||||
Sbjct: 890 ttggtcttgaatggaatggctctgatgattatctggtggtaaa 848
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 318    atggcggccagcgcggcgccga 339
              ||||||||||||||||||||||
Sbjct: 310344 atggcggccagcgcggcgccga 310365
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>emb|AJ699398.2| Chenopodium rubrum mRNA for aquaporin PIP1 (PIP1 gene)
          Length = 1163

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 275 cttggtcttgaatgggatcgctctgatgaccacctggtggta 316
           ||||| |||||||||||| |||||||| || | |||||||||
Sbjct: 969 cttggacttgaatgggatggctctgataacaatctggtggta 928
to top
>emb|AL138758.7| Human DNA sequence from clone RP5-824O18 on chromosome 1p11.2-13.1
             Contains the 3' end of the ABCD3 gene for ATP-binding
             cassette sub-family D (ALD) member 3, the F3 gene for
             coagulation factor III (thromboplastin, tissue factor), a
             novel gene and a CpG island, complete sequence
          Length = 108205

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   aaaaagaaattcactcaaaac 218
             |||||||||||||||||||||
Sbjct: 83524 aaaaagaaattcactcaaaac 83504
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>gb|AC093117.2| Homo sapiens chromosome 1 clone RP11-86H7, complete sequence
          Length = 200426

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 198   aaaaagaaattcactcaaaac 218
             |||||||||||||||||||||
Sbjct: 62382 aaaaagaaattcactcaaaac 62362
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>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 210101

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   acatcaaacttggaagacaaa 147
             |||||||||||||||||||||
Sbjct: 24157 acatcaaacttggaagacaaa 24177
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>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 171960

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    acatcaaacttggaagacaaa 147
              |||||||||||||||||||||
Sbjct: 121183 acatcaaacttggaagacaaa 121203
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>ref|NM_130159.2| Arabidopsis thaliana PIP1B; water channel AT2G45960 (PIP1B) mRNA,
           complete cds
          Length = 1259

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 988 cttgaatgggatggctctgatgac 965
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>ref|XM_521983.1| PREDICTED: Pan troglodytes similar to expressed sequence AI841794
           (LOC466584), mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 407 tgctggatttgcacaacaac 426
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>ref|NM_001005210.1| Homo sapiens leucine rich repeat containing 55 (LRRC55), mRNA
          Length = 3797

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 554 tgctggatttgcacaacaac 573
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>gb|AF499725.1| Thellungiella halophila plasma membrane intrinsic protein 1B-like
           protein mRNA, complete cds
          Length = 833

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 671 cttgaatgggattgctctgatgac 648
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>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence
          Length = 224704

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aaaaagaaattcactcaaaa 217
             ||||||||||||||||||||
Sbjct: 94982 aaaaagaaattcactcaaaa 94963
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>gb|AC126028.4| Mus musculus BAC clone RP24-542M6 from chromosome 15, complete sequence
          Length = 168344

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   aaaaagaaattcactcaaaa 217
             ||||||||||||||||||||
Sbjct: 12511 aaaaagaaattcactcaaaa 12530
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>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    cagagcaagagcaagagtag 125
              ||||||||||||||||||||
Sbjct: 155822 cagagcaagagcaagagtag 155841
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>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence
          Length = 220167

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aaaaagaaattcactcaaaa 217
              ||||||||||||||||||||
Sbjct: 188243 aaaaagaaattcactcaaaa 188224
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>emb|AL161722.9| Human DNA sequence from clone RP11-497J7 on chromosome X Contains a
              melanoma antigen family B 4 pseudogene and a nuclear
              transcription factor Y, gamma (NFYC) pseudogene, complete
              sequence
          Length = 154594

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    aaaaagaaattcactcaaaa 217
              ||||||||||||||||||||
Sbjct: 104634 aaaaagaaattcactcaaaa 104653
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>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13
             Contains STSs, GSSs and a putative CpG island, complete
             sequence
          Length = 82183

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   cacatcaaacttggaagaca 145
             ||||||||||||||||||||
Sbjct: 72891 cacatcaaacttggaagaca 72872
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>gb|AC163448.2| Mus musculus chromosome 1, clone RP24-327O21, complete sequence
          Length = 150247

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   aaaaagaaattcactcaaaa 217
             ||||||||||||||||||||
Sbjct: 67631 aaaaagaaattcactcaaaa 67650
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>emb|CR354559.6| Zebrafish DNA sequence from clone CH211-210F24 in linkage group 17,
             complete sequence
          Length = 54604

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   aaagaaattcactcaaaaca 219
             ||||||||||||||||||||
Sbjct: 16871 aaagaaattcactcaaaaca 16890
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>emb|Z17424.1|ATORFA Arabidopsis thaliana mRNA for PIP1b protein
          Length = 1064

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 908 cttgaatgggatggctctgatgac 885
to top
>emb|X95640.1|BOMIPBTCP B.oleracea mRNA for transmembrane channel protein (mipB)
          Length = 1114

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 867 cttgaatgggatggctctgatgac 844
to top
>emb|X95639.1|BOMIPATCP B.oleracea mRNA for transmembrane channel protein (mipA)
          Length = 1104

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 886 cttgaatgggatggctctgatgac 863
to top
>gb|AY091254.1| Arabidopsis thaliana putative aquaporin protein (At2g45960) mRNA,
           complete cds
          Length = 892

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 849 cttgaatgggatggctctgatgac 826
to top
>emb|X68293.1|ATRNATPR A.thaliana mRNA for transmembrane protein A
          Length = 1105

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 903 cttgaatgggatggctctgatgac 880
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>gb|AY063931.1| Arabidopsis thaliana putative aquaporin, plasma membrane intrinsic
           protein 1B (At2g45960) mRNA, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>emb|CR847868.9| Zebrafish DNA sequence from clone DKEYP-99G4 in linkage group 8,
             complete sequence
          Length = 147399

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   aaaagaaattcactcaaaac 218
             ||||||||||||||||||||
Sbjct: 93607 aaaagaaattcactcaaaac 93588
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>emb|BX548158.10| Zebrafish DNA sequence from clone CH211-106G4 in linkage group 8,
             complete sequence
          Length = 190936

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   aaaagaaattcactcaaaac 218
             ||||||||||||||||||||
Sbjct: 14723 aaaagaaattcactcaaaac 14742
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>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete
              sequence
          Length = 165954

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    catctttctttgtagcagcagctt 270
              |||||||| |||||||||||||||
Sbjct: 108793 catctttcattgtagcagcagctt 108770
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>dbj|AK127591.1| Homo sapiens cDNA FLJ45686 fis, clone FCBBF3012443
          Length = 3797

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 554 tgctggatttgcacaacaac 573
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     tggcggccagcgcggcgccg 338
               ||||||||||||||||||||
Sbjct: 4507898 tggcggccagcgcggcgccg 4507879
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>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete
             sequence
          Length = 101647

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 281   cttgaatgggatcgctctgatgac 304
             |||||||||||| |||||||||||
Sbjct: 15226 cttgaatgggatggctctgatgac 15249
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>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    ttggaagacaaattggaatt 155
              ||||||||||||||||||||
Sbjct: 159892 ttggaagacaaattggaatt 159873
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>gb|AF141898.1|AF141898 Vitis berlandieri x Vitis rupestris putative aquaporin PIP1-2
           (PIP1-2) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 281 cttgaatgggatcgctctgatgaccacctggtggta 316
           |||||||||||| |||||||| || | |||||||||
Sbjct: 911 cttgaatgggatggctctgattactatctggtggta 876
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>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttggaagacaaattggaatt 155
             ||||||||||||||||||||
Sbjct: 50150 ttggaagacaaattggaatt 50131
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>dbj|AK222086.1| Arabidopsis thaliana mRNA for aquaporin, partial cds, clone:
           RAFL22-84-C08
          Length = 318

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 111 cttgaatgggatggctctgatgac 88
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>gb|AY049238.1| Arabidopsis thaliana clone RAFL08-10-H13(R13205), mRNA sequence
          Length = 1913

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>gb|AF299051.1|AF299051 Brassica oleracea aquaporin PIP1b2 mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 868 cttgaatgggatggctctgatgac 845
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>gb|AF299050.1|AF299050 Brassica oleracea aquaporin PIP1b1 mRNA, complete cds
          Length = 1084

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 885 cttgaatgggatggctctgatgac 862
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>emb|BX820173.1|CNS0A8G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS86ZH06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1084

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 889 cttgaatgggatggctctgatgac 866
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>emb|BX819664.1|CNS0A8JV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS13ZG09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 679

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 522 cttgaatgggatggctctgatgac 499
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>emb|BX820969.1|CNS0A7WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH87ZA07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1036

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 894 cttgaatgggatggctctgatgac 871
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>emb|BX819791.1|CNS0A7WA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZA01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1060

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 881 cttgaatgggatggctctgatgac 858
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>gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, complete sequence
          Length = 200430

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    catctttctttgtagcagcagctt 270
              |||||||| |||||||||||||||
Sbjct: 139931 catctttcattgtagcagcagctt 139908
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>gb|AY048294.1| Arabidopsis thaliana At2g45960/F4I18.6 mRNA, complete cds
          Length = 1052

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 909 cttgaatgggatggctctgatgac 886
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>emb|AJ243257.1|SNA243257 Streptomyces natalensis plasmid pSNA1 including spda, kora, spdb2 and
            rep genes
          Length = 9367

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  tggcggccagcgcggcgccg 338
            ||||||||||||||||||||
Sbjct: 4015 tggcggccagcgcggcgccg 3996
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>emb|Z17399.1|ATORFB Arabidopsis thaliana PIP1b gene
          Length = 2773

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 281  cttgaatgggatcgctctgatgac 304
            |||||||||||| |||||||||||
Sbjct: 1547 cttgaatgggatggctctgatgac 1524
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>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete
             sequences
          Length = 171744

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tgctggatttgcacaacaac 34
             ||||||||||||||||||||
Sbjct: 92890 tgctggatttgcacaacaac 92909
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>gb|DQ151348.1| Petromyzon marinus clone T.D8 variable lymphocyte receptor
           diversity region (VLR) mRNA, partial cds
          Length = 534

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  tgctggatttgcacaacaac 34
           ||||||||||||||||||||
Sbjct: 263 tgctggatttgcacaacaac 282
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>gb|AF004293.1|AF004293 Brassica rapa aquaporin (MOD) mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 867 cttgaatgggatggctctgatgac 844
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>dbj|AB030695.1| Raphanus sativus PAQ1b mRNA for plasma membrane aquaporin 1b,
           complete cds
          Length = 1053

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 281 cttgaatgggatcgctctgatgac 304
           |||||||||||| |||||||||||
Sbjct: 870 cttgaatgggatggctctgatgac 847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,727,080
Number of Sequences: 3902068
Number of extensions: 3727080
Number of successful extensions: 82746
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82476
Number of HSP's gapped (non-prelim): 270
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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