ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 54 2e-07
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 46 4e-05
3EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 43 3e-04
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 42 6e-04
5LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 35 0.092
6TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box tran... 32 1.0
7UBXD7_MOUSE (Q6P5G6) UBX domain-containing protein 7 30 3.8
8OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b... 30 3.8
9HGLB_SCHJA (P42665) Hemoglobinase precursor (EC 3.4.22.34) (Anti... 30 3.8
10UBXD7_PONPY (Q5REY7) UBX domain-containing protein 7 30 3.8
11UBXD7_HUMAN (O94888) UBX domain-containing protein 7 30 3.8
12VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21 30 3.8
13OLIG2_MOUSE (Q9EQW6) Oligodendrocyte transcription factor 2 (Oli... 30 3.8
14OLIG2_HUMAN (Q13516) Oligodendrocyte transcription factor 2 (Oli... 30 3.8
15NU5M_CHICK (P18940) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 29 5.0
16TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box tran... 29 5.0
17FA20A_HUMAN (Q96MK3) Protein FAM20A precursor 29 5.0
18NGAP_HUMAN (Q9UJF2) Ras GTPase-activating protein nGAP (RAS prot... 29 5.0
19FHAB_BORPE (P12255) Filamentous hemagglutinin 29 5.0
20BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2... 29 6.6
21BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeo... 29 6.6
22BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2... 29 6.6
23HMP_CHRVO (Q7NSD8) Flavohemoprotein (Hemoglobin-like protein) (F... 28 8.6
24POL2_ARMV (P24819) RNA2 polyprotein (P2) [Contains: Movement pro... 28 8.6
25NU5M_PETMA (Q35543) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 28 8.6
26PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu... 28 8.6
27POL2_ARMVS (Q65030) RNA2 polyprotein (P2) [Contains: P2A protein... 28 8.6
28ATG4_CRYNE (Q5K9L9) Cysteine protease ATG4 (EC 3.4.22.-) (Autoph... 28 8.6
29NHRF2_RAT (Q920G2) Na(+)/H(+) exchange regulatory cofactor NHE-R... 28 8.6
30NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 pr... 28 8.6

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 22/81 (27%), Positives = 42/81 (51%)
 Frame = -2

Query: 434 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRYAGIVPCGPTSSMCDDRENH 255
           LP   F+  ++Y ++ +++     YGF      CC  G   AG +    TS +C +  ++
Sbjct: 445 LPNSTFVYMDIYTIISQMLETPAAYGFEETKKPCCKTGLLSAGALCKKSTSKICPNTSSY 504

Query: 254 VFWDPYHPSEKANVLLAKYIV 192
           +FWD  HP+++A   + K ++
Sbjct: 505 LFWDGVHPTQRAYKTINKVLI 525



to top

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
 Frame = -2

Query: 458 LIELNAGGLPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRY---AGIVPCGP 288
           +IEL +  L        +VY L  EL  + + +GF  + V+CCG+GG+Y    GI  CG 
Sbjct: 263 VIELRSS-LSEAAITYVDVYSLKHELFVHAQGHGFKGSLVSCCGHGGKYNYNKGI-GCGM 320

Query: 287 TSSM----------CDDRENHVFWDPYHPSEKANVLLAKYIVDGDSK 177
              +          CD+ +  V WD  H ++ AN  +   I  G SK
Sbjct: 321 KKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKFIFDKIAPGLSK 367



to top

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
 Frame = -2

Query: 434 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRY--AGIVPCGPTSS------ 279
           LP   F+  ++Y +   L +   K+GF    + CCG GG+Y  +   PCG T +      
Sbjct: 272 LPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGKYNFSVTAPCGDTVTADDGTK 331

Query: 278 ----MCDDRENHVFWDPYHPSEKAN 216
                C      V WD  H +E AN
Sbjct: 332 IVVGSCACPSVRVNWDGAHYTEAAN 356



to top

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = -2

Query: 434 LPGGRFLLANVYDLVMELIANHRKYGFGTASVACCGNGGRYAGIVPCGPTSSMCDDRENH 255
           LP    +  ++Y +  +++ +   YGF      CC  G    G+     T     +  ++
Sbjct: 362 LPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSY 421

Query: 254 VFWDPYHPSEKA-----NVLLAKYI 195
           +FWD  HPS++A       L+ KYI
Sbjct: 422 LFWDGLHPSQRAYEISNRKLVKKYI 446



to top

>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -2

Query: 425 GRFLLANVYDLVMELIANHRKYGF-GTASVACCGNGGRYAGIVPCGPTSSMCDDRENHVF 249
           G  +  +V  L+ E+IAN  +YGF  T   AC    G  AG   C    +  D  +  +F
Sbjct: 270 GNIVRVDVNALLHEVIANPLRYGFLNTIGYACA--QGVNAG--SCRSKDTGFDASKPFLF 325

Query: 248 WDPYHPSEKANVLLAKYIV 192
            D +HP+ +A+ ++++Y V
Sbjct: 326 ADDFHPTPEAHHIVSQYTV 344



to top

>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription|
           factor 3) (TCF-3)
          Length = 588

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
 Frame = +1

Query: 160 FMGDMYLLSP--STMYLASSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQ 333
           + G  +L+ P  S+ YL++  L+      G  +T+      +LDV    T+     P P 
Sbjct: 119 YPGYPFLMIPDLSSPYLSNGPLS-----PGGARTYLQMKWPLLDVPSSATVKDTRSPSPA 173

Query: 334 HATLAVP---NPYFLWLAMSSITRSYTLASRNLPPGSPP 441
           H +  VP   +P+     M  +T   T ++ +  PGSPP
Sbjct: 174 HLSNKVPVVQHPHH----MHPLTPLITYSNDHFSPGSPP 208



to top

>UBXD7_MOUSE (Q6P5G6) UBX domain-containing protein 7|
          Length = 467

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 266 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 138
           RE+ +FW  YH SE+    +  Y + GD  Y+S ++ R   KL
Sbjct: 176 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 217



to top

>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
 Frame = +3

Query: 273 AHAGRRP--ARHDPGVPAAVATARHAGRPEPVLPVVGDELHH-QVVHVGQQEPAPRQP 437
           AH    P  A H P   AA   A   G P P  P      HH Q     QQ PAP  P
Sbjct: 192 AHPSHHPTAAHHSPSTGAAAPPAGPTGLPPPTPP------HHLQQQQQQQQHPAPPPP 243



to top

>HGLB_SCHJA (P42665) Hemoglobinase precursor (EC 3.4.22.34) (Antigen Sj32)|
          Length = 423

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
 Frame = -2

Query: 389 MELIANHRKYGFGTASVACCGNGGRYAGIVPC-----GPTSSMCDDRENHVFW-DPYHPS 228
           ++ +  HR+Y      V  C +G  +AG++P        T++  D+     F  DP   S
Sbjct: 167 LKYLRQHRRYSKLVIYVEACESGSMFAGLLPTDINIYATTAARPDESSYATFCDDPRISS 226

Query: 227 EKANVLLAKYIVDGDSKYISPMNLRKLFK 141
             A++    +IVD +   ++   L + +K
Sbjct: 227 CLADLYSYDWIVDSEKHQLTQRTLDQQYK 255



to top

>UBXD7_PONPY (Q5REY7) UBX domain-containing protein 7|
          Length = 489

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 266 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 138
           RE+ +FW  YH SE+    +  Y + GD  Y+S ++ R   KL
Sbjct: 198 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 239



to top

>UBXD7_HUMAN (O94888) UBX domain-containing protein 7|
          Length = 489

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 266 RENHVFWDPYHPSEKANVLLAKYIVDGDSKYISPMNLRKLFKL 138
           RE+ +FW  YH SE+    +  Y + GD  Y+S ++ R   KL
Sbjct: 198 REHFIFWQVYHDSEEGQRYIQFYKL-GDFPYVSILDPRTGQKL 239



to top

>VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21|
          Length = 1467

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +1

Query: 247 QKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSSITRSYTLASRNLP 426
           Q+   + +S +  V    T PA    LPQ A+ AVP+      +  S+  S + A + LP
Sbjct: 152 QQPALATTSEIPQVANSPTTPAQPDQLPQKASFAVPDTPPTSTSHESVDASVSPALKGLP 211

Query: 427 PG--SPP 441
           P   +PP
Sbjct: 212 PSEVAPP 218



to top

>OLIG2_MOUSE (Q9EQW6) Oligodendrocyte transcription factor 2 (Oligo2)|
          Length = 323

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
 Frame = +3

Query: 57  RLYMPKLHEPRATKKGKMSPAIXXXXXXXXXXXXVHGRYVLAVAVDDVLGEQHVGL---- 224
           R  MP  H P   K  K++  +            +     L   V ++ G  H G     
Sbjct: 132 REVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRL---VSEIYGGHHAGFHPSA 188

Query: 225 ---LAGVIRVPEDVVLPVVA-HAGRRPARHDPGVPAAVATARHA 344
              LA    +P     P  A HA   PA H P +P A A A  A
Sbjct: 189 CGGLAHSAPLPTATAHPAAAAHAAHHPAVHHPILPPAAAAAAAA 232



to top

>OLIG2_HUMAN (Q13516) Oligodendrocyte transcription factor 2 (Oligo2) (Basic|
           helix-loop-helix protein class B 1) (Protein kinase
           C-binding protein RACK17) (Protein kinase C-binding
           protein 2)
          Length = 323

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 28/104 (26%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
 Frame = +3

Query: 57  RLYMPKLHEPRATKKGKMSPAIXXXXXXXXXXXXVHGRYVLAVAVDDVLGEQHVGL---- 224
           R  MP  H P   K  K++  +            +     L   V ++ G  H G     
Sbjct: 132 REVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRL---VSEIYGGHHAGFHPSA 188

Query: 225 ---LAGVIRVPEDVVLPVVA-HAGRRPARHDPGVPAAVATARHA 344
              LA    +P     P  A HA   PA H P +P A A A  A
Sbjct: 189 CGGLAHSAPLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAA 232



to top

>NU5M_CHICK (P18940) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 605

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
 Frame = +1

Query: 31  IVHTSNMSPDYTCPNFTNRAQPKRERCHRRSNLSV*SLKSFLRFMG-DMYLLSPSTMYLA 207
           I+H+ N   D        +  P    C    NL++        F   D+ + + +T Y+ 
Sbjct: 346 IIHSLNGEQDIRKMGCLQKTLPMTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYIN 405

Query: 208 SSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSS 387
           +  L+ +L       T+  R + ++  G H   P+  P         +P    + LA+ S
Sbjct: 406 TWALSLTLLATSFTATYSLRMTLLVQTG-HTRTPSNHPINENTPPAILP---IMRLALGS 461

Query: 388 ITRSYTLASRNLPPGSPP 441
           I     ++S  LPP +PP
Sbjct: 462 IMAGLLISSLILPPKTPP 479



to top

>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription|
           factor 3) (TCF-3) (mTCF-3)
          Length = 584

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
 Frame = +1

Query: 160 FMGDMYLLSP--STMYLASSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQ 333
           + G  +L+ P  S+ YL++  L+      G  +T+      +LDV    T+     P P 
Sbjct: 116 YPGYPFLMIPDLSSPYLSNGPLS-----PGGARTYLQMKWPLLDVPSSATVKDTRSPSPA 170

Query: 334 HATLAVP---NPYFLWLAMSSITRSYTLASRNLPPGSPP 441
           H +  VP   +P+     M  +T   T ++ +  P SPP
Sbjct: 171 HLSNKVPVVQHPHH----MHPLTPLITYSNDHFSPASPP 205



to top

>FA20A_HUMAN (Q96MK3) Protein FAM20A precursor|
          Length = 541

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 292 PH---GTIPAYLPPLPQHATLAVPNPYFLWLAMSSITRSYTLASR 417
           PH   G++ A+LP L     L+VPNP+          RSYTLA +
Sbjct: 333 PHLLEGSLSAFLPSLNLAPRLSVPNPWI---------RSYTLAGK 368



to top

>NGAP_HUMAN (Q9UJF2) Ras GTPase-activating protein nGAP (RAS protein|
           activator-like 1)
          Length = 1139

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
 Frame = +1

Query: 16  CAIVHIVHTSNMSPDYTCPNFTNRAQPKRERC-------HRRSNLSV*SLKSFLRFMGDM 174
           CA+VHI+ ++  + D+     T+    + +RC        R + ++  S++ +L+ +G  
Sbjct: 333 CALVHILQSTGRAKDF----LTDLVMSEVDRCGEHDVLIFRENTIATKSIEEYLKLVGQQ 388

Query: 175 YL 180
           YL
Sbjct: 389 YL 390



to top

>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 279  AGRRPAR-HDPGV--PAAVATARHAGRPEPVLPVVGDELHHQVVHVGQQEP 422
            +GRR A+  D G+  P+AVA          V PV GD++   VV VG ++P
Sbjct: 2296 SGRRNAQVADAGLAGPSAVAAPAVGAADVGVEPVTGDQVDQPVVAVGLEQP 2346



to top

>BRAP_HUMAN (Q7Z569) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes|
           mitogenic signal propagation) (IMP) (RING finger protein
           52) (NY-REN-63 antigen)
          Length = 592

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 75  VWACIIWGHI*CMNYVHDRAY 13
           +W C+I GHI C  YV   AY
Sbjct: 326 LWICLICGHIGCGRYVSRHAY 346



to top

>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain|
           protein MBH1) (Homeobox protein B-H1)
          Length = 384

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 351 PEPVLPVVGDELHHQVVHVGQQEPAPRQPAGVEL 452
           PEP L   G + HH + H GQQ P P  P    L
Sbjct: 74  PEPHLVTDGPQHHHHL-HHGQQPPPPSAPPAQSL 106



to top

>BRAP_MOUSE (Q99MP8) BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes|
           mitogenic signal propagation) (IMP)
          Length = 591

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 75  VWACIIWGHI*CMNYVHDRAY 13
           +W C+I GHI C  YV   AY
Sbjct: 325 LWICLICGHIGCGRYVSRHAY 345



to top

>HMP_CHRVO (Q7NSD8) Flavohemoprotein (Hemoglobin-like protein)|
           (Flavohemoglobin) (Nitric oxide dioxygenase) (EC
           1.14.12.17) (NO oxygenase) (NOD)
          Length = 404

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 19/86 (22%)
 Frame = +3

Query: 198 VLGEQHVGLLAGVIRVPEDVVLPVVAHAGRRPARHDPGVP-------------------A 320
           +L EQ   L+   + V +   + + +H  RR   H+P +                    A
Sbjct: 1   MLSEQTRSLVKATVPVLQQHGVALTSHFYRRMFEHNPELKNVFNQGHQHSGQQQQALAMA 60

Query: 321 AVATARHAGRPEPVLPVVGDELHHQV 398
            +A ARH   P P+LPV+    H  V
Sbjct: 61  VLAYARHIDDPSPLLPVLTRVAHKHV 86



to top

>POL2_ARMV (P24819) RNA2 polyprotein (P2) [Contains: Movement protein (2B-MP);|
           Coat protein (2C-CP)] (Fragment)
          Length = 506

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 325 LPQHATLAVPNPYFLWLAMSSIT---RSYTLASR 417
           LP  +  + PN YFLW+  SS T     Y + SR
Sbjct: 337 LPDLSVPSFPNDYFLWVDFSSFTVDVEEYVIGSR 370



to top

>NU5M_PETMA (Q35543) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 598

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 1/137 (0%)
 Frame = +1

Query: 31  IVHTSNMSPDYTCPNFTNRAQPKRERCHRRSNLSV*SLKSFLRFMG-DMYLLSPSTMYLA 207
           I+H  N   D    +  N   P    C    + ++  L     F   D+ L + +T Y  
Sbjct: 346 IIHNMNNEQDIRKFSCLNNNLPLTTTCMTIGSAALMGLPFLAGFFTKDLILEALNTSYTN 405

Query: 208 SSTLAFSLG*YGSQKTWFSRSSHMLDVGPHGTIPAYLPPLPQHATLAVPNPYFLWLAMSS 387
           +  L  +L    +     + SS ++ +   GT P YLP  P H    + NP    LA  S
Sbjct: 406 AWALMVTLM---AVTLTTAYSSRLIIMSASGT-PRYLPLTPTHENNFIKNP-LKRLAWGS 460

Query: 388 ITRSYTLASRNLPPGSP 438
           +     L S  LPP  P
Sbjct: 461 LISGLILTS-TLPPMKP 476



to top

>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 267 PGEPRLLGPVSPQREG 220
           PG PR++GP  PQR+G
Sbjct: 673 PGGPRMMGPPPPQRDG 688



to top

>POL2_ARMVS (Q65030) RNA2 polyprotein (P2) [Contains: P2A protein (2A); Movement|
            protein (2B-MP); Coat protein (2C-CP)]
          Length = 1131

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 325  LPQHATLAVPNPYFLWLAMSSIT---RSYTLASR 417
            LP  +  + PN YFLW+  SS T     Y + SR
Sbjct: 962  LPDLSVPSFPNDYFLWVDFSSFTVDVEEYVIGSR 995



to top

>ATG4_CRYNE (Q5K9L9) Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related|
            protein 4)
          Length = 1193

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = +1

Query: 43   SNMSPDYTCPNFTNRA--QPKRERCHRRSNLSV*SLKSFLRFMGDMYLLSPSTMYLASST 216
            +++SP +       R   + K E+  +R+ L +  ++  L  +  +Y  S   ++    +
Sbjct: 704  NSISPTFNSSKKKRRGDNEAKEEKWGKRAVLILVGVRLGLDGVNPIYYDSIKALFTFPQS 763

Query: 217  LAFSLG*YGSQKTWF-SRSSHMLDVGPHGT---IPAYLPPLPQHA 339
            +  + G   S   +  S+++H+  + PH T   IP  +PPLP H+
Sbjct: 764  VGIAGGRPSSSYYFVGSQANHLFYLDPHLTRPAIPLQIPPLPVHS 808



to top

>NHRF2_RAT (Q920G2) Na(+)/H(+) exchange regulatory cofactor NHE-RF2 (NHERF-2)|
           (Tyrosine kinase activator protein 1) (TKA-1)
           (SRY-interacting protein 1) (SIP-1) (Solute carrier
           family 9 isoform A3 regulatory factor 2) (NHE3 kinase A
           regulatory protein E3KA
          Length = 337

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 297 RHDPGVPAAVATARHAGRPEPVLPV-VGDELHHQVVH 404
           R +PG PA  A  R   R   V  V V  E HHQVVH
Sbjct: 38  RVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVH 74



to top

>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch|
           4) (hNotch4) [Contains: Notch 4 extracellular
           truncation; Notch 4 intracellular domain]
          Length = 2003

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = -2

Query: 338 ACCGNGGRYAGIVPCGPTSSMCDDRENHVFWDPYHPSEKANVLLAKY 198
           +C    G +  + P G T S C+   N     P HP      LLA +
Sbjct: 451 SCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLATF 497


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,665,648
Number of Sequences: 219361
Number of extensions: 1443981
Number of successful extensions: 4926
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4918
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top