>gb|AF527606.1| Hordeum vulgare iron/ascorbate-dependent oxidoreductase (Hcp1) mRNA,
            complete cds
          Length = 1360

 Score =  305 bits (154), Expect = 6e-80
 Identities = 283/326 (86%)
 Strand = Plus / Minus

                                                                        
Query: 72   ttcagggtgttgatgaatctcttcccttgacgaaaatgttcgaagagcccagccacaaag 131
            |||||||||| ||||||||||||||||||| | |||||||| ||||| ||  | || || 
Sbjct: 1076 ttcagggtgtcgatgaatctcttcccttgaaggaaatgttcaaagagtccgactacgaaa 1017

                                                                        
Query: 132  tccttggccaatattttcctatatcttggcggtcgcttgccatccagcaaaccgggcgcc 191
            ||||||||||  ||||||||||||||||| ||||||||  ||||||||||||||||||| 
Sbjct: 1016 tccttggccatcattttcctatatcttggtggtcgcttctcatccagcaaaccgggcgct 957

                                                                        
Query: 192  ggttctagcatcgtttccgcatccacggcgtaaaacatagccagggaaagcctatccttc 251
            || || |||| ||||||  |||||||||| || ||||  ||||| |||||||| ||||||
Sbjct: 956  ggctccagcaccgtttcttcatccacggcatagaacacggccagcgaaagcctctccttc 897

                                                                        
Query: 252  ttgaagttcgtcaccactctgtgaaatgggctcctaaagattccattgttcattatttct 311
            |    ||||||||||||||||||||  ||||||||||||||||||||||||||||| || 
Sbjct: 896  tcagtgttcgtcaccactctgtgaaccgggctcctaaagattccattgttcattatctcc 837

                                                                        
Query: 312  aggcagtctgctaggttaaccagcaatgtgtgcggcttggctggaacattgtaccatctc 371
            ||||||||||||| ||| | || ||  ||||| |||||||||||||||||||||||| ||
Sbjct: 836  aggcagtctgctaagttgatcaccagcgtgtgaggcttggctggaacattgtaccatttc 777

                                      
Query: 372  ccatctctctgaacttgcaagccacc 397
            ||||||||||||||||||||||||||
Sbjct: 776  ccatctctctgaacttgcaagccacc 751



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 8    ccatctctttattcttcataggcaatcactgtta 41
            ||||||||||||||| |||||| ||||| |||||
Sbjct: 1131 ccatctctttattctacataggtaatcaatgtta 1098

>ref|NM_185692.1| Oryza sativa (japonica cultivar-group), Ozsa8043 predicted mRNA
          Length = 1164

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 355 gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
           |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 763 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 718

>ref|XM_476309.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1053

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 355 gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
           |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 763 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 718

>emb|AL157711.12| Human DNA sequence from clone RP11-21M8 on chromosome 10 Contains part
             of the DOCK1 gene for dedicator of cyto-kinesis 1,
             complete sequence
          Length = 154818

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 368   tctcccatctctctgaacttgc 389
             ||||||||||||||||||||||
Sbjct: 76243 tctcccatctctctgaacttgc 76264

>emb|BX248323.8| Zebrafish DNA sequence from clone CH211-199J6, complete sequence
          Length = 177714

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 210    gcatccacggcgtaaaacatag 231
              ||||||||||||||||||||||
Sbjct: 121066 gcatccacggcgtaaaacatag 121087

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 355     gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
               |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 3905561 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 3905516



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 355     gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
               |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 3893670 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 3893625



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 355     gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
               |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 3855682 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 3855637

>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 355   gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
             |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 11437 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 11392

>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0015E04
          Length = 152046

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 355    gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
              |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 151692 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 151647



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 355    gaacattgtaccatctcccatctctctgaacttgcaagccaccgac 400
              |||||||||||||  | ||||| ||||||| ||||| |||||||||
Sbjct: 113636 gaacattgtaccacttgccatccctctgaatttgcaggccaccgac 113591

>gb|AC121560.17| Mus musculus chromosome 16, clone RP24-398G11, complete sequence
          Length = 189161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     caacctatattttcagggtgt 81
              |||||||||||||||||||||
Sbjct: 128875 caacctatattttcagggtgt 128855

>emb|CR376855.11| Zebrafish DNA sequence from clone DKEY-56N2 in linkage group 25, complete
              sequence
          Length = 219164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    gcatccacggcgtaaaacata 230
              |||||||||||||||||||||
Sbjct: 152114 gcatccacggcgtaaaacata 152134

>emb|BX248386.35| Zebrafish DNA sequence from clone CH211-231M12, complete sequence
          Length = 148681

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    gcatccacggcgtaaaacata 230
              |||||||||||||||||||||
Sbjct: 123942 gcatccacggcgtaaaacata 123922

>emb|AL139085.13| Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the
             5' end of the gene for chondromodulin I precursor (CHM-I),
             a novel gene, the PCDH8 gene for protocadherin 8 and 4 CpG
             islands, complete sequence
          Length = 173292

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 359   attgtaccatctcccatctctctga 383
             |||||||||||||||| ||||||||
Sbjct: 29810 attgtaccatctcccacctctctga 29786

>emb|BX293556.14| Zebrafish DNA sequence from clone DKEY-21N20 in linkage group 11,
              complete sequence
          Length = 212880

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    gcatccacggcgtaaaacata 230
              |||||||||||||||||||||
Sbjct: 207644 gcatccacggcgtaaaacata 207624

>emb|BX005349.6| Zebrafish DNA sequence from clone DKEY-111D8 in linkage group 10,
             complete sequence
          Length = 103469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   gcatccacggcgtaaaacata 230
             |||||||||||||||||||||
Sbjct: 10940 gcatccacggcgtaaaacata 10920

>emb|BX571961.11| Zebrafish DNA sequence from clone DKEY-205O12 in linkage group 22,
             complete sequence
          Length = 149478

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 210   gcatccacggcgtaaaacata 230
             |||||||||||||||||||||
Sbjct: 98344 gcatccacggcgtaaaacata 98364

>dbj|AB021290.1| Homo sapiens gene for chondromodulin-1, promoter and partial cds
          Length = 2982

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 359  attgtaccatctcccatctctctga 383
            |||||||||||||||| ||||||||
Sbjct: 1330 attgtaccatctcccacctctctga 1354

>gb|AC003959.1| Homo sapiens chromosome 5, P1 clone 1029A7 (LBNL H15), complete
            sequence
          Length = 83684

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   ctctttattcttcataggca 31
            ||||||||||||||||||||
Sbjct: 6888 ctctttattcttcataggca 6869

>gb|AC125448.16| Mus musculus chromosome 10, clone RP23-122D10, complete sequence
          Length = 188948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    tagcatcgtttccgcatcca 216
              ||||||||||||||||||||
Sbjct: 166593 tagcatcgtttccgcatcca 166612

>ref|XM_753922.1| Ustilago maydis 521 hypothetical protein (UM02868.1) partial mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  ccacaaagtccttggccaat 143
            ||||||||||||||||||||
Sbjct: 2887 ccacaaagtccttggccaat 2868

>gb|AC132448.3| Mus musculus BAC clone RP23-180B23 from chromosome 8, complete sequence
          Length = 211388

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    caatattttcctatatcttg 159
              ||||||||||||||||||||
Sbjct: 141678 caatattttcctatatcttg 141697

>gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome 3, complete sequence
          Length = 166604

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   ttccattgttcattatttct 311
             ||||||||||||||||||||
Sbjct: 80071 ttccattgttcattatttct 80052

>emb|CR450787.6| Zebrafish DNA sequence from clone CH211-222O17 in linkage group 12,
              complete sequence
          Length = 212974

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    gcatccacggcgtaaaacat 229
              ||||||||||||||||||||
Sbjct: 117154 gcatccacggcgtaaaacat 117135

>gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, complete sequence
          Length = 203057

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  ttccattgttcattatttct 311
            ||||||||||||||||||||
Sbjct: 9450 ttccattgttcattatttct 9469

>emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chromosome 17, complete
              sequence
          Length = 163007

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     taataaacgcccaacctata 69
              ||||||||||||||||||||
Sbjct: 118910 taataaacgcccaacctata 118929

>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence
          Length = 211119

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    tctgtgaaatgggctcctaa 288
              ||||||||||||||||||||
Sbjct: 153685 tctgtgaaatgggctcctaa 153704

>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctctttattcttcataggca 31
             ||||||||||||||||||||
Sbjct: 19115 ctctttattcttcataggca 19096

>gb|AC023426.29| Homo sapiens 12 BAC RP11-396L8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148610

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    atttctaggcagtctgctag 325
              ||||||||||||||||||||
Sbjct: 122632 atttctaggcagtctgctag 122613

>gb|AF222718.1| Chrysodidymus synuroideus mitochondrion, complete genome
          Length = 34119

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   agtccttggccaatattttc 149
             ||||||||||||||||||||
Sbjct: 32595 agtccttggccaatattttc 32614

>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown,
             complete sequence
          Length = 232130

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctctttattcttcataggca 31
             ||||||||||||||||||||
Sbjct: 15548 ctctttattcttcataggca 15529

>gb|AC019106.3| Homo sapiens BAC clone RP11-479L11 from 2, complete sequence
          Length = 198540

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   agattccattgttcattatt 308
             ||||||||||||||||||||
Sbjct: 51899 agattccattgttcattatt 51918

>gb|U29379.1| Caenorhabditis elegans cosmid K05B2, complete sequence
          Length = 37599

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tatattttcagggtgttgat 85
             ||||||||||||||||||||
Sbjct: 23471 tatattttcagggtgttgat 23452

>emb|CR954297.15| Zebrafish DNA sequence from clone DKEY-69M3 in linkage group 8,
             complete sequence
          Length = 232837

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   gcatccacggcgtaaaacat 229
             ||||||||||||||||||||
Sbjct: 85062 gcatccacggcgtaaaacat 85081

>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      tctcttcccttgacgaaaat 108
               ||||||||||||||||||||
Sbjct: 1096031 tctcttcccttgacgaaaat 1096012

>gb|AC129222.4| Mus musculus BAC clone RP24-532L14 from 14, complete sequence
          Length = 181469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    catctctctgaacttgcaag 392
              ||||||||||||||||||||
Sbjct: 124280 catctctctgaacttgcaag 124261

>emb|AL713894.12| Mouse DNA sequence from clone RP23-48J18 on chromosome X, complete
              sequence
          Length = 264395

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 234    agggaaagcctatccttcttgaag 257
              ||||||| ||||||||||||||||
Sbjct: 197778 agggaaatcctatccttcttgaag 197755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,397,082
Number of Sequences: 3902068
Number of extensions: 3397082
Number of successful extensions: 67738
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67648
Number of HSP's gapped (non-prelim): 89
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)