ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AM048829.1| Triticum aestivum mRNA for sialyltransferase-lik... 359 6e-96
2ref|XM_506687.1| PREDICTED Oryza sativa (japonica cultivar-group... 196 5e-47
3ref|XM_463893.1| Oryza sativa (japonica cultivar-group), mRNA 196 5e-47
4emb|AM048827.1| Saccharum officinarum mRNA for sialyltransferase... 196 5e-47
5dbj|AK101004.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
6dbj|AK064002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
7emb|AM167921.1| Zea mays mRNA for sialyltransferase like protein... 151 3e-33
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
9dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
10ref|NM_202675.1| Arabidopsis thaliana sialyltransferase AT3G4882... 88 3e-14
11ref|NM_114741.2| Arabidopsis thaliana sialyltransferase/ transfe... 88 3e-14
12gb|AY133816.1| Arabidopsis thaliana clone U19220 unknown protein... 88 3e-14
13gb|AY080589.1| Arabidopsis thaliana unknown protein (At3g48820) ... 88 3e-14
14emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 88 3e-14
15emb|BX824378.1|CNS0A6ZE Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
16emb|BX822312.1|CNS0A6ZT Arabidopsis thaliana Full-length cDNA Co... 88 3e-14
17dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone... 88 3e-14
18dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone... 88 3e-14
19emb|AM048821.2| Lotus corniculatus var. japonicus mRNA for sialy... 86 1e-13
20gb|BT014123.1| Lycopersicon esculentum clone 133231F, mRNA sequence 82 2e-12
21emb|AM048816.1| Glycine max mRNA for sialyltransferase-like prot... 82 2e-12
22emb|AM048817.1| Glycine max mRNA for sialyltransferase-like prot... 74 5e-10
23gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, comple... 48 0.028
24gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome... 46 0.11
25gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome... 46 0.11
26gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosom... 44 0.44
27gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, comple... 44 0.44
28ref|XM_847023.1| PREDICTED: Canis familiaris similar to SoxLZ/So... 42 1.7
29gb|AC107611.6| Rattus norvegicus 10 BAC CH230-195I24 (Children's... 42 1.7
30emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on ch... 42 1.7
31gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome... 42 1.7
32emb|Z92788.1|CEF53B8 Caenorhabditis elegans Cosmid F53B8, comple... 42 1.7
33emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on ch... 42 1.7
34emb|AL929042.5| Mouse DNA sequence from clone RP23-91K11 on chro... 42 1.7
35emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chr... 42 1.7
36gb|AC118255.32| Mus musculus chromosome 8, clone RP24-89A4, comp... 40 6.9
37gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, co... 40 6.9
38gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosom... 40 6.9
39gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 6.9
40gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complet... 40 6.9
41gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, comple... 40 6.9
42gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580... 40 6.9
43gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, c... 40 6.9
44gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Can... 40 6.9
45gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252... 40 6.9
46dbj|AK031115.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN... 40 6.9
47gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cance... 40 6.9
48gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, com... 40 6.9
49emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chr... 40 6.9
50emb|AL928545.6| Mouse DNA sequence from clone RP23-218A13 on chr... 40 6.9

>emb|AM048829.1| Triticum aestivum mRNA for sialyltransferase-like protein (stv2
           gene)
          Length = 1756

 Score =  359 bits (181), Expect = 6e-96
 Identities = 196/201 (97%)
 Strand = Plus / Minus

                                                                       
Query: 165 aacggcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatga 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aacggcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatga 564

                                                                       
Query: 225 aagcttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgat 284
           ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 563 aagcttctccatgcaaagagttctgttcttgcacttattcagaaggattcctttgttgat 504

                                                                       
Query: 285 cctgcgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgag 344
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 503 cctgcgccatgcatactcctcccagccatttggtagtgcatcaacgtactcttttgtgag 444

                                
Query: 345 tgttgtggtactgttgcgaac 365
           | |||||||||||||||||||
Sbjct: 443 tattgtggtactgttgcgaac 423



 Score =  129 bits (65), Expect = 1e-26
 Identities = 71/73 (97%)
 Strand = Plus / Minus

                                                                       
Query: 422 ctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagactctcc 481
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 419 ctcccatgaggccacagcttcgcagagattgaactcaaatgccaacccttcagactctcc 360

                        
Query: 482 agttattggatct 494
           |||| ||||||||
Sbjct: 359 agtttttggatct 347



to top

>ref|XM_506687.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1217_F02.7 mRNA
          Length = 1859

 Score =  196 bits (99), Expect = 5e-47
 Identities = 174/199 (87%)
 Strand = Plus / Minus

                                                                       
Query: 169 gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
           ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 600 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 541

                                                                       
Query: 229 ttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgatcctg 288
           ||  ||||||||||||| ||||||  |||||| |||||| |||||||||| |||||||||
Sbjct: 540 ttttccatgcaaagagtcctgttctggcacttgttcagatggattcctttattgatcctg 481

                                                                       
Query: 289 cgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgtt 348
           |||||||||||||||||||| |||||||| || ||||| |||||||| ||||| ||| ||
Sbjct: 480 cgccatgcatactcctcccaaccatttggcaacgcatcgatgtactcctttgtaagtatt 421

                              
Query: 349 gtggtactgttgcgaacct 367
           || || || ||||||||||
Sbjct: 420 gttgtgctattgcgaacct 402



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                       
Query: 417 acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
           |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 405 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 346

                                
Query: 477 tctccagttattggatctttc 497
           ||||||||| |||||||||||
Sbjct: 345 tctccagtttttggatctttc 325



to top

>ref|XM_463893.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1801

 Score =  196 bits (99), Expect = 5e-47
 Identities = 174/199 (87%)
 Strand = Plus / Minus

                                                                       
Query: 169 gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
           ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 631 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 572

                                                                       
Query: 229 ttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgatcctg 288
           ||  ||||||||||||| ||||||  |||||| |||||| |||||||||| |||||||||
Sbjct: 571 ttttccatgcaaagagtcctgttctggcacttgttcagatggattcctttattgatcctg 512

                                                                       
Query: 289 cgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgtt 348
           |||||||||||||||||||| |||||||| || ||||| |||||||| ||||| ||| ||
Sbjct: 511 cgccatgcatactcctcccaaccatttggcaacgcatcgatgtactcctttgtaagtatt 452

                              
Query: 349 gtggtactgttgcgaacct 367
           || || || ||||||||||
Sbjct: 451 gttgtgctattgcgaacct 433



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                       
Query: 417 acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
           |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 436 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 377

                                
Query: 477 tctccagttattggatctttc 497
           ||||||||| |||||||||||
Sbjct: 376 tctccagtttttggatctttc 356



to top

>emb|AM048827.1| Saccharum officinarum mRNA for sialyltransferase-like protein (stv2
           gene)
          Length = 1574

 Score =  196 bits (99), Expect = 5e-47
 Identities = 168/191 (87%)
 Strand = Plus / Minus

                                                                       
Query: 169 gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
           ||||| ||||||||||| ||||| |||||||| ||||| ||||| ||||| | ||| |||
Sbjct: 631 gcacatctaccaaattggtgaggaacatatggagatgtctcaggtagaactagtgagagc 572

                                                                       
Query: 229 ttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgatcctg 288
           ||  ||||||||||  ||||||||  ||||||||||||||||||||||||||||||||| 
Sbjct: 571 ttttccatgcaaaggcttctgttctggcacttattcagaaggattcctttgttgatcctt 512

                                                                       
Query: 289 cgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgtt 348
           | ||||||||||||||||||||||||||| || |||||||||||||| |||||||||  |
Sbjct: 511 ctccatgcatactcctcccagccatttggcaaagcatcaatgtactcctttgtgagtact 452

                      
Query: 349 gtggtactgtt 359
           || ||||||||
Sbjct: 451 gttgtactgtt 441



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 417 acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttca 473
           |||| |||||||||||| ||||||||||| |||||||||||||| | ||| ||||||
Sbjct: 436 acctgctcccatgaggctacagcttcgcacagattgaactcaaacgacagaccttca 380



to top

>dbj|AK101004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147K09, full
           insert sequence
          Length = 1802

 Score =  196 bits (99), Expect = 5e-47
 Identities = 174/199 (87%)
 Strand = Plus / Minus

                                                                       
Query: 169 gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
           ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 632 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 573

                                                                       
Query: 229 ttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgatcctg 288
           ||  ||||||||||||| ||||||  |||||| |||||| |||||||||| |||||||||
Sbjct: 572 ttttccatgcaaagagtcctgttctggcacttgttcagatggattcctttattgatcctg 513

                                                                       
Query: 289 cgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgtt 348
           |||||||||||||||||||| |||||||| || ||||| |||||||| ||||| ||| ||
Sbjct: 512 cgccatgcatactcctcccaaccatttggcaacgcatcgatgtactcctttgtaagtatt 453

                              
Query: 349 gtggtactgttgcgaacct 367
           || || || ||||||||||
Sbjct: 452 gttgtgctattgcgaacct 434



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                       
Query: 417 acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
           |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 437 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 378

                                
Query: 477 tctccagttattggatctttc 497
           ||||||||| |||||||||||
Sbjct: 377 tctccagtttttggatctttc 357



to top

>dbj|AK064002.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-F12, full
           insert sequence
          Length = 1859

 Score =  196 bits (99), Expect = 5e-47
 Identities = 174/199 (87%)
 Strand = Plus / Minus

                                                                       
Query: 169 gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
           ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 600 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 541

                                                                       
Query: 229 ttcgccatgcaaagagttctgttcctgcacttattcagaaggattcctttgttgatcctg 288
           ||  ||||||||||||| ||||||  |||||| |||||| |||||||||| |||||||||
Sbjct: 540 ttttccatgcaaagagtcctgttctggcacttgttcagatggattcctttattgatcctg 481

                                                                       
Query: 289 cgccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgtt 348
           |||||||||||||||||||| |||||||| || ||||| |||||||| ||||| ||| ||
Sbjct: 480 cgccatgcatactcctcccaaccatttggcaacgcatcgatgtactcctttgtaagtatt 421

                              
Query: 349 gtggtactgttgcgaacct 367
           || || || ||||||||||
Sbjct: 420 gttgtgctattgcgaacct 402



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                       
Query: 417 acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
           |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 405 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 346

                                
Query: 477 tctccagttattggatctttc 497
           ||||||||| |||||||||||
Sbjct: 345 tctccagtttttggatctttc 325



to top

>emb|AM167921.1| Zea mays mRNA for sialyltransferase like protein (stv2 gene)
          Length = 1613

 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Minus

                                                                       
Query: 196 tatggtgatgtgtcagggagaaccaatgaaagcttcgccatgcaaagagttctgttcctg 255
           ||||||||||| ||||| ||||| | ||| |||||  ||||||| ||  ||||||||  |
Sbjct: 548 tatggtgatgtctcaggtagaactagtgagagcttttccatgcagaggcttctgttctgg 489

                                                                       
Query: 256 cacttattcagaaggattcctttgttgatcctgcgccatgcatactcctcccagccattt 315
           ||||||||||||||||||||||||||||| || | ||||||||| |||||||||||||||
Sbjct: 488 cacttattcagaaggattcctttgttgattcttctccatgcatattcctcccagccattt 429

                                                       
Query: 316 ggtaatgcatcaatgtactcttttgtgagtgttgtggtactgtt 359
           || || |||||||||||||| |||||||||  ||| ||||||||
Sbjct: 428 ggcaaagcatcaatgtactcctttgtgagtactgttgtactgtt 385



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 422 ctcccatgaggccacagcttcgcagagattgaactcaaa 460
           ||||||||||||||||||||| || ||||||||||||||
Sbjct: 375 ctcccatgaggccacagcttcacacagattgaactcaaa 337



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 1e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                          
Query: 264    cagaaggattcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgc 323
              |||| |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 963449 cagatggattcctttattgatcctgcgccatgcatactcctcccaaccatttggcaacgc 963390

                                                            
Query: 324    atcaatgtactcttttgtgagtgttgtggtactgttgcgaacctag 369
              ||| |||||||| ||||| ||| |||| || || ||||||||||||
Sbjct: 963389 atcgatgtactcctttgtaagtattgttgtgctattgcgaacctag 963344



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                          
Query: 169    gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
              ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 963635 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 963576

                                      
Query: 229    ttcgccatgcaaagagttctgttc 252
              ||  ||||||||||||| ||||||
Sbjct: 963575 ttttccatgcaaagagtcctgttc 963552



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                           
Query: 417     acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
               |||| |||||||||||| |||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 1004113 acctgctcccatgaggctacagcttcacagagattgaactcaaatgataaaccttcaggt 1004054

                                     
Query: 477     tctccagttattggatctttct 498
               ||||||||| ||||||||||||
Sbjct: 1004053 tctccagtttttggatctttct 1004032



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 417    acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
              |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 963166 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 963107

                                    
Query: 477    tctccagttattggatctttct 498
              ||||||||| ||||||||||||
Sbjct: 963106 tctccagtttttggatctttct 963085



to top

>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1217_F02
          Length = 118822

 Score =  115 bits (58), Expect = 1e-22
 Identities = 94/106 (88%)
 Strand = Plus / Minus

                                                                         
Query: 264   cagaaggattcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgc 323
             |||| |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 34868 cagatggattcctttattgatcctgcgccatgcatactcctcccaaccatttggcaacgc 34809

                                                           
Query: 324   atcaatgtactcttttgtgagtgttgtggtactgttgcgaacctag 369
             ||| |||||||| ||||| ||| |||| || || ||||||||||||
Sbjct: 34808 atcgatgtactcctttgtaagtattgttgtgctattgcgaacctag 34763



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                         
Query: 169   gcacagctaccaaattgctgaggtacatatggtgatgtgtcagggagaaccaatgaaagc 228
             ||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| |||||||| 
Sbjct: 35054 gcacatctaccaaattgccgaggtacatatggtggtgtctcaggaagaactaatgaaagt 34995

                                     
Query: 229   ttcgccatgcaaagagttctgttc 252
             ||  ||||||||||||| ||||||
Sbjct: 34994 ttttccatgcaaagagtcctgttc 34971



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 417   acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
             |||| |||||||||||| |||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 75532 acctgctcccatgaggctacagcttcacagagattgaactcaaatgataaaccttcaggt 75473

                                   
Query: 477   tctccagttattggatctttct 498
             ||||||||| ||||||||||||
Sbjct: 75472 tctccagtttttggatctttct 75451



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 417   acctcctcccatgaggccacagcttcgcagagattgaactcaaatgccagcccttcagac 476
             |||| ||||||||| ||||||||||| |||||||||||||||||||  |  |||||||  
Sbjct: 34585 acctgctcccatgaagccacagcttcacagagattgaactcaaatgataaaccttcaggt 34526

                                   
Query: 477   tctccagttattggatctttct 498
             ||||||||| ||||||||||||
Sbjct: 34525 tctccagtttttggatctttct 34504



to top

>ref|NM_202675.1| Arabidopsis thaliana sialyltransferase AT3G48820 transcript variant
           AT3G48820.2 mRNA, complete cds
          Length = 1705

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 430 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 371

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 370 tattccttggtgagtattgt 351



to top

>ref|NM_114741.2| Arabidopsis thaliana sialyltransferase/ transferase, transferring
           glycosyl groups AT3G48820 transcript variant AT3G48820.1
           mRNA, complete cds
          Length = 1736

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 461 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 402

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 401 tattccttggtgagtattgt 382



to top

>gb|AY133816.1| Arabidopsis thaliana clone U19220 unknown protein (At3g48820) mRNA,
           complete cds
          Length = 1354

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 425 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 366

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 365 tattccttggtgagtattgt 346



to top

>gb|AY080589.1| Arabidopsis thaliana unknown protein (At3g48820) mRNA, complete cds
          Length = 1752

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 461 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 402

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 401 tattccttggtgagtattgt 382



to top

>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 271   attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
             |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 50429 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 50488

                                 
Query: 331   tactcttttgtgagtgttgt 350
             || || || |||||| ||||
Sbjct: 50489 tattccttggtgagtattgt 50508



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 195   atatggtgatgtgtcagggagaaccaatgaaagcttc 231
             |||||||| ||| ||||| || |||||||||||||||
Sbjct: 50163 atatggtggtgtttcaggaagcaccaatgaaagcttc 50199



to top

>emb|BX824378.1|CNS0A6ZE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH44ZE12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1647

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 491 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 432

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 431 tattccttggtgagtattgt 412



to top

>emb|BX822312.1|CNS0A6ZT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZB08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1569

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 429 attcctttattgattctgcgccatgcataatcctcccatccatttggtaaggcatcaatg 370

                               
Query: 331 tactcttttgtgagtgttgt 350
           || || || |||||| ||||
Sbjct: 369 tattccttggtgagtattgt 350



to top

>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
             complete sequence
          Length = 113459

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 273   tcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatgta 332
             |||||| |||||||| ||||||||||| |||||||| ||||||||||| | ||||||| |
Sbjct: 49598 tcctttattgatcctacgccatgcatattcctcccatccatttggtaaagaatcaatgaa 49657

                                                 
Query: 333   ctcttttgtgagtgttgtggtactgttgcgaaccta 368
             ||| || |||||| | ||||||||||| || |||||
Sbjct: 49658 ctccttggtgagtatagtggtactgttccgcaccta 49693



to top

>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
           complete sequence
          Length = 108582

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                       
Query: 273 tcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatgta 332
           |||||| |||||||| ||||||||||| |||||||| ||||||||||| | ||||||| |
Sbjct: 589 tcctttattgatcctacgccatgcatattcctcccatccatttggtaaagaatcaatgaa 648

                                               
Query: 333 ctcttttgtgagtgttgtggtactgttgcgaaccta 368
           ||| || |||||| | ||||||||||| || |||||
Sbjct: 649 ctccttggtgagtatagtggtactgttccgcaccta 684



to top

>emb|AM048821.2| Lotus corniculatus var. japonicus mRNA for sialyltransferase-like
           protein (stv2 gene)
          Length = 1329

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 273 tcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatgta 332
           |||||| |||||||| ||||||||||| |||||||| ||||||||||| | ||||||| |
Sbjct: 429 tcctttattgatcctacgccatgcatattcctcccatccatttggtaaagaatcaatgaa 370

                                      
Query: 333 ctcttttgtgagtgttgtggtactgtt 359
           ||| || |||||| | |||||||||||
Sbjct: 369 ctccttggtgagtatagtggtactgtt 343



to top

>gb|BT014123.1| Lycopersicon esculentum clone 133231F, mRNA sequence
          Length = 1937

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                       
Query: 291 ccatgcatactcctcccagccatttggtaatgcatcaatgtactcttttgtgagtgttgt 350
           ||||||||| |||||||| ||||||||||  |||||||||||||| |||||||||  |||
Sbjct: 560 ccatgcatagtcctcccatccatttggtagggcatcaatgtactcctttgtgagtactgt 501

                    
Query: 351 ggtactgtt 359
           |||||||||
Sbjct: 500 ggtactgtt 492



to top

>emb|AM048816.1| Glycine max mRNA for sialyltransferase-like protein (stv2a gene)
          Length = 1552

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| |||||||| ||||||||||| |||||||| ||||||||||| | |||||||
Sbjct: 516 attcctttattgatcctacgccatgcatattcctcccatccatttggtaaagaatcaatg 457

                                        
Query: 331 tactcttttgtgagtgttgtggtactgtt 359
            | || || |||||| | |||||||||||
Sbjct: 456 aattccttggtgagtatagtggtactgtt 428



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 196 tatggtgatgtgtcagggagaaccaatgaaagcttcgccatgca 239
           ||||||| ||| ||||||||||||| |||||| ||| |||||||
Sbjct: 591 tatggtggtgtttcagggagaaccagtgaaagtttctccatgca 548



to top

>emb|AM048817.1| Glycine max mRNA for sialyltransferase-like protein (stv2b gene)
          Length = 1585

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 271 attcctttgttgatcctgcgccatgcatactcctcccagccatttggtaatgcatcaatg 330
           |||||||| |||||||| ||||||||||| |||||||| ||||||||||| | |||||||
Sbjct: 549 attcctttattgatcctacgccatgcatattcctcccatccatttggtaaagaatcaatg 490

                                        
Query: 331 tactcttttgtgagtgttgtggtactgtt 359
            | || || || ||| | |||||||||||
Sbjct: 489 aattccttggtaagtatagtggtactgtt 461



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 196 tatggtgatgtgtcagggagaaccaatgaaagcttcgccatgca 239
           ||||||| ||| ||||||||||||| |||||| ||| |||||||
Sbjct: 624 tatggtggtgtttcagggagaaccagtgaaagtttctccatgca 581



to top

>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence
          Length = 200232

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             ||||||||||||||||||||||||
Sbjct: 45804 cacacctcctcccatgaggccaca 45827



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||||||||| |||||
Sbjct: 45824 cacacctcctcccatgagcccaca 45847



to top

>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence
          Length = 176432

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 415   acacctcctcccatgaggccaca 437
             |||||||||||||||||||||||
Sbjct: 86520 acacctcctcccatgaggccaca 86542



to top

>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence
          Length = 204262

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 415   acacctcctcccatgaggccaca 437
             |||||||||||||||||||||||
Sbjct: 14537 acacctcctcccatgaggccaca 14559



to top

>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence
          Length = 215002

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 447   agattgaactcaaatgccagcc 468
             ||||||||||||||||||||||
Sbjct: 64266 agattgaactcaaatgccagcc 64245



to top

>gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, complete sequence
          Length = 168588

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 447    agattgaactcaaatgccagcc 468
              ||||||||||||||||||||||
Sbjct: 135180 agattgaactcaaatgccagcc 135201



to top

>ref|XM_847023.1| PREDICTED: Canis familiaris similar to SoxLZ/Sox6 leucine zipper
           binding protein (LOC609707), mRNA
          Length = 816

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  catgatccatatatcaaaatt 30
           |||||||||||||||||||||
Sbjct: 688 catgatccatatatcaaaatt 708



to top

>gb|AC107611.6| Rattus norvegicus 10 BAC CH230-195I24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211076

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 414   cacacctcctcccatgaggccacagcttc 442
             |||||||||||| ||||||||||| ||||
Sbjct: 32005 cacacctcctccaatgaggccacaccttc 31977



to top

>emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on chromosome 1 Contains the
             DNB5 gene for deleted in neuroblastoma 5 and the 3' end of
             the RERE gene for arginine-glutamic acid dipeptide (RE)
             repeats (KIAA0458), complete sequence
          Length = 122331

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   gaaagcttcgccatgcaaaga 243
             |||||||||||||||||||||
Sbjct: 67427 gaaagcttcgccatgcaaaga 67407



to top

>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence
          Length = 210186

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 414    cacacctcctcccatgaggccacagcttc 442
              |||||||||||| ||||||||||| ||||
Sbjct: 111192 cacacctcctccaatgaggccacaccttc 111220



to top

>emb|Z92788.1|CEF53B8 Caenorhabditis elegans Cosmid F53B8, complete sequence
          Length = 17439

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 405  cataaaatgcacacctcctcc 425
            |||||||||||||||||||||
Sbjct: 7928 cataaaatgcacacctcctcc 7908



to top

>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete
              sequence
          Length = 205515

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 414    cacacctcctcccatgaggccacagcttc 442
              |||||||||||| ||||||||||| ||||
Sbjct: 193473 cacacctcctccaatgaggccacaccttc 193501



to top

>emb|AL929042.5| Mouse DNA sequence from clone RP23-91K11 on chromosome 2, complete
             sequence
          Length = 138491

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 413   gcacacctcctcccatgaggccaca 437
             |||||| ||||||||||||||||||
Sbjct: 75400 gcacacttcctcccatgaggccaca 75424



to top

>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
            sequence
          Length = 221374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 414  cacacctcctcccatgaggccacagcttc 442
            |||||||||||| ||||||||||| ||||
Sbjct: 6084 cacacctcctccaatgaggccacaccttc 6056



to top

>gb|AC118255.32| Mus musculus chromosome 8, clone RP24-89A4, complete sequence
          Length = 200858

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              |||||||||||| |||||||||||
Sbjct: 128406 cacacctcctccaatgaggccaca 128429



to top

>gb|AC124227.21| Mus musculus chromosome 1, clone RP23-118M13, complete sequence
          Length = 220762

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              ||||||||||||||| ||||||||
Sbjct: 149244 cacacctcctcccataaggccaca 149221



to top

>gb|AC127554.4| Mus musculus BAC clone RP24-323K23 from chromosome 8, complete sequence
          Length = 178416

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              |||||||||||| |||||||||||
Sbjct: 110448 cacacctcctccaatgaggccaca 110425



to top

>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete
             sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             ||||||||||||||| ||||||||
Sbjct: 19271 cacacctcctcccataaggccaca 19248



to top

>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence
          Length = 211411

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   tgaactcaaatgccagccct 470
             ||||||||||||||||||||
Sbjct: 21487 tgaactcaaatgccagccct 21506



to top

>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence
          Length = 174491

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              ||||||||||||||| ||||||||
Sbjct: 172002 cacacctcctcccataaggccaca 171979



to top

>gb|AC006507.21| Mus musculus strain 129S6/SvEvTac clone rp21-580p20 map 10, complete
             sequence
          Length = 185664

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 98390 cacacctcctccaatgaggccaca 98367



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 98370 cacacctcctccaatgaggccaca 98347



to top

>gb|AC140851.12| Mus musculus strain C57BL/6J clone rp23-358m4, complete sequence
          Length = 214913

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 85818 cacacctcctccaatgaggccaca 85795



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 85798 cacacctcctccaatgaggccaca 85775



to top

>gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207222

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             ||||||||||||||| ||||||||
Sbjct: 48425 cacacctcctcccataaggccaca 48402



to top

>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence
          Length = 139891

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 16844 cacacctcctccaatgaggccaca 16867



to top

>dbj|AK031115.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched
            library, clone:5930406C12 product:unclassifiable, full
            insert sequence
          Length = 2772

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 414  cacacctcctcccatgaggccaca 437
            |||||||||||| |||||||||||
Sbjct: 1484 cacacctcctccaatgaggccaca 1461



to top

>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172188

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              |||||||||||| |||||||||||
Sbjct: 166200 cacacctcctccaatgaggccaca 166223



to top

>gb|AC132939.23| Mus musculus chromosome 5, clone RP24-91I11, complete sequence
          Length = 224918

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              |||||||||||| |||||||||||
Sbjct: 200294 cacacctcctccaatgaggccaca 200317



to top

>emb|AL671173.12| Mouse DNA sequence from clone RP23-426N4 on chromosome 4, complete
             sequence
          Length = 201741

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 414   cacacctcctcccatgaggccaca 437
             |||||||||||| |||||||||||
Sbjct: 99463 cacacctcctccgatgaggccaca 99486



to top

>emb|AL928545.6| Mouse DNA sequence from clone RP23-218A13 on chromosome 2, complete
              sequence
          Length = 199257

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    cacacctcctcccatgaggccaca 437
              |||||||||||| |||||||||||
Sbjct: 176882 cacacctcctccaatgaggccaca 176905


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,577,389
Number of Sequences: 3902068
Number of extensions: 3577389
Number of successful extensions: 81899
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81751
Number of HSP's gapped (non-prelim): 148
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top