ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF142588.1|AF142588 Hordeum vulgare isoamylase 1 gene, partia... 147 2e-32
2gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5... 131 1e-27
3gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 131 1e-27
4gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN... 131 1e-27
5gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, com... 131 1e-27
6gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 92 1e-15
7gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, compl... 88 2e-14
8gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosom... 44 0.27
9gb|AC104383.4| Homo sapiens chromosome 11, clone CTD-2381F24, co... 44 0.27
10gb|AC019317.9| Homo sapiens chromosome , clone RP11-206L19, comp... 44 0.27
11gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosom... 44 0.27
12gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrio... 44 0.27
13emb|AL772196.13| Mouse DNA sequence from clone RP23-358M21 on ch... 44 0.27
14gb|AC165337.2| Mus musculus BAC clone RP24-356N8 from chromosome... 42 1.1
15gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Canc... 42 1.1
16gb|AC131320.8| Mus musculus chromosome 12, clone RP23-398E18, co... 42 1.1
17gb|AC167234.4| Mus musculus 10 BAC RP23-158E3 (Roswell Park Canc... 42 1.1
18emb|BX936303.17| Zebrafish DNA sequence from clone DKEY-105F21 i... 42 1.1
19emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 i... 42 1.1
20emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2 42 1.1
21gb|AC116002.5| Homo sapiens chromosome 18, clone RP11-182L8, com... 42 1.1
22emb|CR388095.8| Zebrafish DNA sequence from clone CH211-199M9 in... 42 1.1
23emb|BX470135.8| Zebrafish DNA sequence from clone RP71-15H20 in ... 42 1.1
24gb|AC100777.2| Homo sapiens chromosome 18, clone CTD-2013O15, co... 42 1.1
25emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 42 1.1
26gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Can... 42 1.1
27gb|AC113385.2| Homo sapiens chromosome 5 clone RP11-346J10, comp... 42 1.1
28gb|AC008582.6|AC008582 Homo sapiens chromosome 5 clone CTC-565J2... 42 1.1
29emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in ... 42 1.1
30gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Can... 42 1.1
31gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B1... 42 1.1
32emb|BX323023.8| Zebrafish DNA sequence from clone CH211-231I17 i... 42 1.1
33gb|AC133948.3| Mus musculus BAC clone RP24-226H19 from 10, compl... 42 1.1
34emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, ... 42 1.1
35emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chro... 42 1.1
36emb|AL808140.5| Mouse DNA sequence from clone RP23-147K5 on chro... 42 1.1
37gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, co... 40 4.2
38gb|AY747307.1| Nosema spodopterae large subunit ribosomal RNA ge... 40 4.2
39gb|BC052117.1| Danio rerio zgc:56538, mRNA (cDNA clone MGC:56538... 40 4.2
40ref|NM_200326.1| Danio rerio zgc:56538 (zgc:56538), mRNA 40 4.2
41gb|AY211393.1| Nosema bombycis large subunit ribosomal RNA, comp... 40 4.2
42gb|BC060983.1| Mus musculus a disintegrin and metallopeptidase d... 40 4.2
43gb|AY259631.1| Nosema bombycis large subunit ribosomal RNA gene,... 40 4.2
44emb|Z81505.2|CEF16A11 Caenorhabditis elegans Cosmid F16A11, comp... 40 4.2
45gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosom... 40 4.2
46gb|AC126454.3| Mus musculus BAC clone RP23-256L12 from 19, compl... 40 4.2
47gb|AY209011.1| Nosema bombycis large subunit ribosomal RNA gene,... 40 4.2
48gb|AY320460.1| Scirpophaga excerptalis from India 16S ribosomal ... 40 4.2
49emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on ch... 40 4.2
50gb|AY211390.1| Nosema spodopterae large subunit ribosomal RNA ge... 40 4.2
51dbj|AK131749.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.2
52gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, co... 40 4.2
53gb|AY960986.1| Nosema sp. PX1 large subunit ribosomal RNA gene, ... 40 4.2
54dbj|AK005759.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.2
55emb|AL935185.11| Zebrafish DNA sequence from clone CH211-250A16 ... 40 4.2
56gb|AF513715.1| Mus musculus strain ICR ADAM32 mRNA, complete cds 40 4.2
57emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chro... 40 4.2
58gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2... 40 4.2
59emb|AL929505.14| Zebrafish DNA sequence from clone CH211-120K19 ... 40 4.2
60emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in l... 40 4.2
61emb|Z73575.1|SCYPL219W S.cerevisiae chromosome XVI reading frame... 40 4.2
62gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, co... 40 4.2
63emb|AL133467.4|CNS01DV7 Human chromosome 14 DNA sequence BAC R-1... 40 4.2
64dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 4.2
65gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complet... 40 4.2
66ref|NM_153397.1| Mus musculus a disintegrin and metallopeptidase... 40 4.2
67gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, comple... 40 4.2
68emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chro... 40 4.2
69gb|L28962.1|NMERRLSB Nosema bombycis ribosomal RNA large subunit 40 4.2
70dbj|AB025352.1| Mus musculus gene for P/Q-type calcium channel a... 40 4.2 
>gb|AF142588.1|AF142588 Hordeum vulgare isoamylase 1 gene, partial cds
          Length = 3291

 Score =  147 bits (74), Expect = 2e-32
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcat 61
           |||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 652 gcctccaaacatgtccacctaaattatttttataaaccagattatataatctatcttcat 711

                                                         
Query: 62  aattcaaattatcataacctattatggttccaaacatagcctaagt 107
           || |||||||||||||| ||||||||||||||||||  ||||||||
Sbjct: 712 aactcaaattatcataatctattatggttccaaacagggcctaagt 757
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>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds
          Length = 12080

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                        
Query: 4    ctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcataa 63
            |||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 8496 ctccaaacatgtccacctggattatttttataaaccagattatataatctatgttcataa 8437

                                              
Query: 64   ttcaaattatcataacctattatggttccaaaca 97
            | || |||||||||| ||||||||||||||||||
Sbjct: 8436 tccagattatcataatctattatggttccaaaca 8403
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>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 4     ctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcataa 63
             |||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 60218 ctccaaacatgtccacctggattatttttataaaccagattatataatctatgttcataa 60159

                                               
Query: 64    ttcaaattatcataacctattatggttccaaaca 97
             | || |||||||||| ||||||||||||||||||
Sbjct: 60158 tccagattatcataatctattatggttccaaaca 60125
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>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete
            cds
          Length = 12360

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                        
Query: 4    ctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcataa 63
            |||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 9267 ctccaaacatgtccacctggattatttttataaaccagattatataatctatgttcataa 9208

                                              
Query: 64   ttcaaattatcataacctattatggttccaaaca 97
            | || |||||||||| ||||||||||||||||||
Sbjct: 9207 tccagattatcataatctattatggttccaaaca 9174
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>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and
             transposon MITE-like and retrotransposon Lolaog, complete
             sequence
          Length = 17220

 Score =  131 bits (66), Expect = 1e-27
 Identities = 87/94 (92%)
 Strand = Plus / Minus

                                                                         
Query: 4     ctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcataa 63
             |||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||
Sbjct: 14481 ctccaaacatgtccacctggattatttttataaaccagattatataatctatgttcataa 14422

                                               
Query: 64    ttcaaattatcataacctattatggttccaaaca 97
             | || |||||||||| ||||||||||||||||||
Sbjct: 14421 tccagattatcataatctattatggttccaaaca 14388
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                         
Query: 3     cctccaaacgtgtccacctagattatttttataaaccagattatgtaatctatattcata 62
             ||||||||| || ||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct: 70714 cctccaaacatgcccacctagattatttttataagccagattatataatctatcttcata 70655

                                               
Query: 63    attcaaattatcataacctattatggttccaaac 96
             ||  | | ||| |||| ||||||||||| |||||
Sbjct: 70654 atctataatattataatctattatggtttcaaac 70621
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>gb|AY517470.1| Triticum aestivum S-like RNase (WRN2) mRNA, complete cds
          Length = 850

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                       
Query: 184 aaatagcaacctgctccctccacatgtttacactatttcatgacatacactggcttcatt 243
           ||||||||||| ||||||||||||| ||||||| |||||| || ||||| || |||||||
Sbjct: 847 aaatagcaaccggctccctccacatttttacacaatttcaagatatacattgtcttcatt 788

                       
Query: 244 aacatcacgagc 255
           ||||||||||||
Sbjct: 787 aacatcacgagc 776
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>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence
          Length = 209230

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 291   atgaatcaggaggaaaacagaa 312
             ||||||||||||||||||||||
Sbjct: 17273 atgaatcaggaggaaaacagaa 17252
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>gb|AC104383.4| Homo sapiens chromosome 11, clone CTD-2381F24, complete sequence
          Length = 143501

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    aaaccagattatgtaatctata 56
             ||||||||||||||||||||||
Sbjct: 49391 aaaccagattatgtaatctata 49370
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>gb|AC019317.9| Homo sapiens chromosome , clone RP11-206L19, complete sequence
          Length = 146836

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 35     aaaccagattatgtaatctata 56
              ||||||||||||||||||||||
Sbjct: 123134 aaaccagattatgtaatctata 123113
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>gb|AC159284.2| Mus musculus BAC clone RP23-318K10 from chromosome 6, complete sequence
          Length = 188553

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 291   atgaatcaggaggaaaacagaa 312
             ||||||||||||||||||||||
Sbjct: 82476 atgaatcaggaggaaaacagaa 82455
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>gb|AF396436.1| Tetrahymena thermophila strain SB210 mitochondrion, complete genome
          Length = 47577

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    ttatttttataaaccagattat 46
             ||||||||||||||||||||||
Sbjct: 30596 ttatttttataaaccagattat 30617
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>emb|AL772196.13| Mouse DNA sequence from clone RP23-358M21 on chromosome 4, complete
             sequence
          Length = 238016

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 45    atgtaatctatattcataattc 66
             ||||||||||||||||||||||
Sbjct: 54512 atgtaatctatattcataattc 54533
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>gb|AC165337.2| Mus musculus BAC clone RP24-356N8 from chromosome 12, complete sequence
          Length = 155881

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    aatcaggaggaaaacagaaat 314
              |||||||||||||||||||||
Sbjct: 141810 aatcaggaggaaaacagaaat 141830
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>gb|AC153974.9| Mus musculus 10 BAC RP24-462I5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 162977

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 294    aatcaggaggaaaacagaaat 314
              |||||||||||||||||||||
Sbjct: 132080 aatcaggaggaaaacagaaat 132060
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>gb|AC131320.8| Mus musculus chromosome 12, clone RP23-398E18, complete sequence
          Length = 210230

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   aatcaggaggaaaacagaaat 314
             |||||||||||||||||||||
Sbjct: 20980 aatcaggaggaaaacagaaat 21000
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>gb|AC167234.4| Mus musculus 10 BAC RP23-158E3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184159

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    aatcaggaggaaaacagaaat 314
              |||||||||||||||||||||
Sbjct: 177580 aatcaggaggaaaacagaaat 177600
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>emb|BX936303.17| Zebrafish DNA sequence from clone DKEY-105F21 in linkage group 4,
             complete sequence
          Length = 131273

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    tatattcataattcaaattat 73
             |||||||||||||||||||||
Sbjct: 97957 tatattcataattcaaattat 97937
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>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
              complete sequence
          Length = 190731

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     tatattcataattcaaattat 73
              |||||||||||||||||||||
Sbjct: 145714 tatattcataattcaaattat 145694
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>emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2
          Length = 234081

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     tagattatttttataaaccagatta 45
              |||||||||||||||||| ||||||
Sbjct: 173252 tagattatttttataaacaagatta 173276
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>gb|AC116002.5| Homo sapiens chromosome 18, clone RP11-182L8, complete sequence
          Length = 173233

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 227    catacactggcttcattaaca 247
              |||||||||||||||||||||
Sbjct: 133898 catacactggcttcattaaca 133878
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>emb|CR388095.8| Zebrafish DNA sequence from clone CH211-199M9 in linkage group 14,
              complete sequence
          Length = 208632

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 53     tatattcataattcaaattat 73
              |||||||||||||||||||||
Sbjct: 131921 tatattcataattcaaattat 131941
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>emb|BX470135.8| Zebrafish DNA sequence from clone RP71-15H20 in linkage group 8,
             complete sequence
          Length = 147292

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 164   ttcttgtttatctgaataataaata 188
             ||||||||||| |||||||||||||
Sbjct: 93278 ttcttgtttatatgaataataaata 93254
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>gb|AC100777.2| Homo sapiens chromosome 18, clone CTD-2013O15, complete sequence
          Length = 171787

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   catacactggcttcattaaca 247
             |||||||||||||||||||||
Sbjct: 16239 catacactggcttcattaaca 16219
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    tatattcataattcaaattat 73
             |||||||||||||||||||||
Sbjct: 58918 tatattcataattcaaattat 58898
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>gb|AC153549.5| Mus musculus 10 BAC RP23-222O23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217249

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    aatcaggaggaaaacagaaat 314
              |||||||||||||||||||||
Sbjct: 171866 aatcaggaggaaaacagaaat 171886
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>gb|AC113385.2| Homo sapiens chromosome 5 clone RP11-346J10, complete sequence
          Length = 190771

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 51    tctatattcataattcaaattatca 75
             |||||||| ||||||||||||||||
Sbjct: 41688 tctatattaataattcaaattatca 41664
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>gb|AC008582.6|AC008582 Homo sapiens chromosome 5 clone CTC-565J21, complete sequence
          Length = 76008

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 51    tctatattcataattcaaattatca 75
             |||||||| ||||||||||||||||
Sbjct: 58030 tctatattaataattcaaattatca 58006
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>emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in linkage group 14,
            complete sequence
          Length = 265520

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   tatattcataattcaaattat 73
            |||||||||||||||||||||
Sbjct: 6807 tatattcataattcaaattat 6827
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>gb|AC157018.6| Mus musculus 10 BAC RP24-414A19 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 146007

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   aatcaggaggaaaacagaaat 314
             |||||||||||||||||||||
Sbjct: 61134 aatcaggaggaaaacagaaat 61154
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>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence
          Length = 160703

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 51    tctatattcataattcaaattatca 75
             |||||||| ||||||||||||||||
Sbjct: 62558 tctatattaataattcaaattatca 62582
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>emb|BX323023.8| Zebrafish DNA sequence from clone CH211-231I17 in linkage group 4,
             complete sequence
          Length = 91609

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    tatattcataattcaaattat 73
             |||||||||||||||||||||
Sbjct: 85403 tatattcataattcaaattat 85423
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>gb|AC133948.3| Mus musculus BAC clone RP24-226H19 from 10, complete sequence
          Length = 168206

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   aataataaatagcaacctgct 198
             |||||||||||||||||||||
Sbjct: 91717 aataataaatagcaacctgct 91737
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>emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, complete sequence
          Length = 201299

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 164    ttcttgtttatctgaataataaata 188
              ||||||||||| |||||||||||||
Sbjct: 105806 ttcttgtttatatgaataataaata 105782
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>emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chromosome X, complete
             sequence
          Length = 166240

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   taaatagcaacctgctccctc 203
             |||||||||||||||||||||
Sbjct: 43723 taaatagcaacctgctccctc 43743
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>emb|AL808140.5| Mouse DNA sequence from clone RP23-147K5 on chromosome X, complete
             sequence
          Length = 162772

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   aatcaggaggaaaacagaaat 314
             |||||||||||||||||||||
Sbjct: 86132 aatcaggaggaaaacagaaat 86112
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>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence
          Length = 186799

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 157   gtactgcttcttgtttatctgaataata 184
             ||||||||||||||||||  ||||||||
Sbjct: 19374 gtactgcttcttgtttattggaataata 19347
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>gb|AY747307.1| Nosema spodopterae large subunit ribosomal RNA gene, internal
           transcribed spacer, small subunit ribosomal RNA gene,
           intergenic spacer , and 5S ribosomal RNA gene, complete
           sequence
          Length = 4446

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 327 attatgtaatctatattcat 346
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>gb|BC052117.1| Danio rerio zgc:56538, mRNA (cDNA clone MGC:56538 IMAGE:5914245),
            complete cds
          Length = 2384

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 147  aaaatgtaaagtactgcttcttgtttat 174
            |||||||| | |||||||||||||||||
Sbjct: 2250 aaaatgtacattactgcttcttgtttat 2277
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>ref|NM_200326.1| Danio rerio zgc:56538 (zgc:56538), mRNA
          Length = 2384

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 147  aaaatgtaaagtactgcttcttgtttat 174
            |||||||| | |||||||||||||||||
Sbjct: 2250 aaaatgtacattactgcttcttgtttat 2277
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>gb|AY211393.1| Nosema bombycis large subunit ribosomal RNA, complete sequence
          Length = 2497

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 186 attatgtaatctatattcat 205
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>gb|BC060983.1| Mus musculus a disintegrin and metallopeptidase domain 32, mRNA
           (cDNA clone MGC:74078 IMAGE:6772485), complete cds
          Length = 2542

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 157 gtactgcttcttgtttatctgaataata 184
           ||||||||||||||||||  ||||||||
Sbjct: 189 gtactgcttcttgtttattggaataata 162
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>gb|AY259631.1| Nosema bombycis large subunit ribosomal RNA gene, internal
           transcribed spacer, small subunit ribosomal RNA gene,
           intergenic spacer region, and 5S ribosomal RNA gene,
           complete sequence
          Length = 4442

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 327 attatgtaatctatattcat 346
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>emb|Z81505.2|CEF16A11 Caenorhabditis elegans Cosmid F16A11, complete sequence
          Length = 30626

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   gattatgtaatctatattca 60
            ||||||||||||||||||||
Sbjct: 5304 gattatgtaatctatattca 5285
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>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete
             sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   tgaatcaggaggaaaacaga 311
             ||||||||||||||||||||
Sbjct: 26984 tgaatcaggaggaaaacaga 27003
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>gb|AC126454.3| Mus musculus BAC clone RP23-256L12 from 19, complete sequence
          Length = 188518

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    acctagattatttttataaa 37
             ||||||||||||||||||||
Sbjct: 43274 acctagattatttttataaa 43255
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>gb|AY209011.1| Nosema bombycis large subunit ribosomal RNA gene, partial sequence;
           intergenic spacer, complete sequence; and small subunit
           ribosomal RNA gene, partial sequence
          Length = 3908

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 186 attatgtaatctatattcat 205
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>gb|AY320460.1| Scirpophaga excerptalis from India 16S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 378

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 60  ataattcaaattatcataacctat 83
           |||||||||||||| |||||||||
Sbjct: 223 ataattcaaattataataacctat 246
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>emb|AL645682.14| Mouse DNA sequence from clone RP23-287B22 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 198340

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     taatctatattcataattca 67
              ||||||||||||||||||||
Sbjct: 172474 taatctatattcataattca 172493
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>gb|AY211390.1| Nosema spodopterae large subunit ribosomal RNA gene, complete
           sequence
          Length = 2497

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 186 attatgtaatctatattcat 205
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>dbj|AK131749.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700067A01 product:a disintegrin and
           metalloprotease domain 32, full insert sequence
          Length = 746

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 157 gtactgcttcttgtttatctgaataata 184
           ||||||||||||||||||  ||||||||
Sbjct: 192 gtactgcttcttgtttattggaataata 165
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>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence
          Length = 181460

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   aatgaatcaggaggaaaaca 309
             ||||||||||||||||||||
Sbjct: 39553 aatgaatcaggaggaaaaca 39534
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>gb|AY960986.1| Nosema sp. PX1 large subunit ribosomal RNA gene, internal
           transcribed spacer, small subunit ribosomal RNA and 5S
           ribosomal RNA genes, complete sequence
          Length = 4450

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  attatgtaatctatattcat 61
           ||||||||||||||||||||
Sbjct: 327 attatgtaatctatattcat 346
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>dbj|AK005759.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700008E04
           product:METALLOPROTEASE/DISINTEGRIN (FRAGMENT) homolog
           [Rattus norvegicus], full insert sequence
          Length = 2235

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 157 gtactgcttcttgtttatctgaataata 184
           ||||||||||||||||||  ||||||||
Sbjct: 183 gtactgcttcttgtttattggaataata 156
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>emb|AL935185.11| Zebrafish DNA sequence from clone CH211-250A16 in linkage group 21,
             complete sequence
          Length = 191281

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 165   tcttgtttatctgaataataaata 188
             ||||||||||||||||| ||||||
Sbjct: 77506 tcttgtttatctgaatattaaata 77483
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>gb|AF513715.1| Mus musculus strain ICR ADAM32 mRNA, complete cds
          Length = 2453

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 157 gtactgcttcttgtttatctgaataata 184
           ||||||||||||||||||  ||||||||
Sbjct: 175 gtactgcttcttgtttattggaataata 148
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>emb|AL928771.6| Mouse DNA sequence from clone RP23-45J15 on chromosome 4, complete
             sequence
          Length = 133159

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    attcataattcaaattatca 75
             ||||||||||||||||||||
Sbjct: 72772 attcataattcaaattatca 72791
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>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence
          Length = 189949

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    tctgaataataaatagcaac 193
              ||||||||||||||||||||
Sbjct: 164526 tctgaataataaatagcaac 164545
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>emb|AL929505.14| Zebrafish DNA sequence from clone CH211-120K19 in linkage group 16,
             complete sequence
          Length = 178839

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 164   ttcttgtttatctgaataataaat 187
             |||||||||||||||| |||||||
Sbjct: 31957 ttcttgtttatctgaaaaataaat 31934
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>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4, complete
              sequence
          Length = 205347

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    cttcttgtttatctgaataa 182
              ||||||||||||||||||||
Sbjct: 120482 cttcttgtttatctgaataa 120501
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>emb|Z73575.1|SCYPL219W S.cerevisiae chromosome XVI reading frame ORF YPL219w
          Length = 2254

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 158 tactgcttcttgtttatctg 177
           ||||||||||||||||||||
Sbjct: 307 tactgcttcttgtttatctg 288
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>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence
          Length = 211915

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 157    gtactgcttcttgtttatctgaataata 184
              ||||||||||||||||||  ||||||||
Sbjct: 208492 gtactgcttcttgtttattggaataata 208465
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>emb|AL133467.4|CNS01DV7 Human chromosome 14 DNA sequence BAC R-1070N10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 210791

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   atgaatcaggaggaaaacagaaat 314
             ||||||||| ||||||||||||||
Sbjct: 41258 atgaatcagcaggaaaacagaaat 41281
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>dbj|AP001021.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-793A3, complete
             sequence
          Length = 222596

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    cctagattatttttataaac 38
             ||||||||||||||||||||
Sbjct: 46615 cctagattatttttataaac 46634
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>gb|AC131189.3| Mus musculus BAC clone RP24-330P2 from 8, complete sequence
          Length = 157757

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    tgaatcaggaggaaaacaga 311
              ||||||||||||||||||||
Sbjct: 108524 tgaatcaggaggaaaacaga 108505
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>ref|NM_153397.1| Mus musculus a disintegrin and metallopeptidase domain 32 (Adam32),
           mRNA
          Length = 2453

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 157 gtactgcttcttgtttatctgaataata 184
           ||||||||||||||||||  ||||||||
Sbjct: 175 gtactgcttcttgtttattggaataata 148
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>gb|AC146603.3| Mus musculus BAC clone RP23-304P17 from 8, complete sequence
          Length = 167842

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   tgaatcaggaggaaaacaga 311
             ||||||||||||||||||||
Sbjct: 54622 tgaatcaggaggaaaacaga 54603
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>emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chromosome 2, complete
             sequence
          Length = 143280

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    ttcaaattatcataacctat 83
             ||||||||||||||||||||
Sbjct: 30424 ttcaaattatcataacctat 30405
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>gb|L28962.1|NMERRLSB Nosema bombycis ribosomal RNA large subunit
          Length = 292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 42 attatgtaatctatattcat 61
          ||||||||||||||||||||
Sbjct: 55 attatgtaatctatattcat 74
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>dbj|AB025352.1| Mus musculus gene for P/Q-type calcium channel alpha1A subunit,
            promoter region and partial cds
          Length = 8393

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tgaatcaggaggaaaacaga 311
            ||||||||||||||||||||
Sbjct: 5633 tgaatcaggaggaaaacaga 5652


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,368,525
Number of Sequences: 3902068
Number of extensions: 4368525
Number of successful extensions: 87784
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87651
Number of HSP's gapped (non-prelim): 133
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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