>gb|AY109270.1| Zea mays PCO088979 mRNA sequence
          Length = 1193

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 78/96 (81%)
 Strand = Plus / Minus

                                                                       
Query: 231 gctggagaccggagcgccatcttcactctgcacaccttcaacggccagaattttcttaac 290
           ||||||||| |||||| |||||||| ||||  ||  |||  | ||||  ||||||||| |
Sbjct: 906 gctggagactggagcggcatcttcattctgtgcaggttcggctgccacgattttcttagc 847

                                               
Query: 291 aacttgcttgggtatgtcaaggtcatcctgcatgca 326
            ||||| ||||| || ||||||||||| ||||||||
Sbjct: 846 gacttgtttgggaatatcaaggtcatcttgcatgca 811

>gb|BT017864.1| Zea mays clone EL01N0512A05.c mRNA sequence
          Length = 1184

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 280 attttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgca 326
           ||||||||| | ||||| ||||| || ||||||||||| ||||||||
Sbjct: 842 attttcttagcgacttgtttgggaatatcaaggtcatcttgcatgca 796

>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20,
              complete sequence
          Length = 197237

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 90     aaatgctcaattcatacaagtt 111
              ||||||||||||||||||||||
Sbjct: 116804 aaatgctcaattcatacaagtt 116783

>emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in linkage group 10, complete
              sequence
          Length = 112069

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 90     aaatgctcaattcatacaagtt 111
              ||||||||||||||||||||||
Sbjct: 103520 aaatgctcaattcatacaagtt 103541

>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete
              sequence
          Length = 199642

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    ccatttacaacaacacacaga 180
              |||||||||||||||||||||
Sbjct: 102236 ccatttacaacaacacacaga 102256



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   ccatttacaacaacacacaga 180
             |||||||||||||||||||||
Sbjct: 48821 ccatttacaacaacacacaga 48841

>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence
          Length = 208096

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     aaaaaatgctactatcagatt 25
             |||||||||||||||||||||
Sbjct: 26430 aaaaaatgctactatcagatt 26410

>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 233080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 291    aacttgcttgggtatgtcaag 311
              |||||||||||||||||||||
Sbjct: 231248 aacttgcttgggtatgtcaag 231228

>gb|AC117971.7| Rattus norvegicus 7 BAC CH230-393L21 (Children's Hospital Oakland
           Research Institute) complete sequence
          Length = 80793

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 291 aacttgcttgggtatgtcaag 311
           |||||||||||||||||||||
Sbjct: 172 aacttgcttgggtatgtcaag 152

>dbj|AK076557.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921508F21 product:unclassifiable, full
           insert sequence
          Length = 1582

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 160 ccatttacaacaacacacaga 180
           |||||||||||||||||||||
Sbjct: 427 ccatttacaacaacacacaga 407

>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete
             sequence
          Length = 199355

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     aaaaaatgctactatcagatt 25
             |||||||||||||||||||||
Sbjct: 30519 aaaaaatgctactatcagatt 30539

>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence
          Length = 169027

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   tcatggacacataccatcaaacta 211
             |||||||| |||||||||||||||
Sbjct: 13480 tcatggactcataccatcaaacta 13503

>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 249   atcttcactctgcacaccttcaac 272
             |||||||||||| |||||||||||
Sbjct: 68240 atcttcactctgaacaccttcaac 68217

>ref|XM_742883.1| Aspergillus fumigatus Af293 transcription initiation factor TFIID
           complex 60 kDa subunit (Afu5g03680) partial mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 ctgcacaccttcaacggcca 277
           ||||||||||||||||||||
Sbjct: 399 ctgcacaccttcaacggcca 380

>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete
             sequence
          Length = 154633

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    acacccatgaaaatacaagg 60
             ||||||||||||||||||||
Sbjct: 61823 acacccatgaaaatacaagg 61804

>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ccatcaaactagggtgacta 220
             ||||||||||||||||||||
Sbjct: 45104 ccatcaaactagggtgacta 45123

>gb|AC121844.2| Mus musculus BAC clone RP24-81L3 from chromosome 10, complete sequence
          Length = 187443

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ttcaatgccaacccaagctc 129
              ||||||||||||||||||||
Sbjct: 154104 ttcaatgccaacccaagctc 154085

>gb|AC151281.3| Mus musculus BAC clone RP24-144E8 from chromosome 17, complete
            sequence
          Length = 171820

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 188  tcatggacacataccatcaaacta 211
            |||||||| |||||||||||||||
Sbjct: 6166 tcatggactcataccatcaaacta 6143

>gb|AC140299.2| Mus musculus BAC clone RP23-363J15 from 10, complete sequence
          Length = 201657

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    ttcaatgccaacccaagctc 129
              ||||||||||||||||||||
Sbjct: 196577 ttcaatgccaacccaagctc 196596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,427,255
Number of Sequences: 3902068
Number of extensions: 3427255
Number of successful extensions: 65770
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65732
Number of HSP's gapped (non-prelim): 38
length of query: 335
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 313
effective length of database: 17,147,199,772
effective search space: 5367073528636
effective search space used: 5367073528636
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)