>NEK11_MOUSE (Q8C0Q4) Serine/threonine-protein kinase Nek11 (EC 2.7.11.1)|
           (NimA-related protein kinase 11) (Never in mitosis
           A-related kinase 11)
          Length = 628

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +3

Query: 198 HKHMIAEVDNRVLPNLP*SHSL-CPDIQGFE-SLEKFATD-GH--VTEAPKV 338
           H H++ E+D R L +LP   SL C D+   E SLE    D GH  + E P V
Sbjct: 388 HAHVLHELDERTLESLPEPQSLPCLDLDELEPSLEDTIVDLGHYEIPEDPLV 439

>HNRH1_MOUSE (O35737) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)|
          Length = 448

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 298 FSRDSNPCISGQRE*DYGRLGSTLLSTS 215
           F RD N C SG  +  YG  GST  ST+
Sbjct: 259 FGRDLNYCFSGMSDHRYGDGGSTFQSTT 286

>HNRH1_HUMAN (P31943) Heterogeneous nuclear ribonucleoprotein H (hnRNP H)|
          Length = 448

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 298 FSRDSNPCISGQRE*DYGRLGSTLLSTS 215
           F RD N C SG  +  YG  GST  ST+
Sbjct: 259 FGRDLNYCFSGMSDHRYGDGGSTFQSTT 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,879,627
Number of Sequences: 219361
Number of extensions: 1260111
Number of successful extensions: 2562
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)