ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart15c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 145 bits (73), Expect = 1e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 321 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgcca 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgcca 883 Query: 381 gcgccgcgccggtgaacgggcccacccag 409 ||||||| ||| ||||||| || |||||| Sbjct: 882 gcgccgcaccgatgaacggaccaacccag 854
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 137 bits (69), Expect = 3e-29 Identities = 84/89 (94%) Strand = Plus / Minus Query: 321 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgcca 380 ||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 957 actagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgcca 898 Query: 381 gcgccgcgccggtgaacgggcccacccag 409 ||||||||||| ||||||| ||||||||| Sbjct: 897 gcgccgcgccgatgaacggtcccacccag 869
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1018 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 959 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 958 gccgctccgatgaacggaccaacccag 932
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 35369413 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 35369354 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 35369353 gccgctccgatgaacggaccaacccag 35369327 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 27065642 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 27065583
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 29961 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 29902 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 29901 gccgctccgatgaacggaccaacccag 29875
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1017 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 958 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 957 gccgctccgatgaacggaccaacccag 931
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and complete cds Length = 5325 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 4916 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 4857 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 4856 gccgctccgatgaacggaccaacccag 4830
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 109 bits (55), Expect = 7e-21 Identities = 79/87 (90%) Strand = Plus / Minus Query: 323 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagc 382 ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 995 tagtcccggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagt 936 Query: 383 gccgcgccggtgaacgggcccacccag 409 ||||| ||| ||||||| || |||||| Sbjct: 935 gccgctccgatgaacggaccaacccag 909
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 820 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 761 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 760 gatgaaggggccgacccag 742
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 258 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 317 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 318 gatgaaggggccgacccag 336
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 519 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 460 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 459 gatgaaggggccgacccag 441
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 970 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 911 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 910 gatgaaggggccgacccag 892
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 965 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 906 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 905 gatgaaggggccgacccag 887
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 69.9 bits (35), Expect = 6e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 1294 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 1235 Query: 391 ggtgaacgggcccacccag 409 | |||| ||||| |||||| Sbjct: 1234 gatgaaggggccgacccag 1216
>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence Length = 698 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 332 ctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgccg 391 |||||||| ||||| |||||||| | |||| |||||||||||| |||||||| |||||| Sbjct: 426 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 367 Query: 392 gtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 366 atgaaggggccgacccag 349
>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete cds Length = 1086 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 332 ctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgccg 391 |||||||| ||||| |||||||| | |||| |||||||||||| |||||||| |||||| Sbjct: 857 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 798 Query: 392 gtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 797 atgaaggggccgacccag 780
>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein Length = 1169 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 332 ctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgccg 391 |||||||| ||||| |||||||| | |||| |||||||||||| |||||||| |||||| Sbjct: 914 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 855 Query: 392 gtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 854 atgaaggggccgacccag 837
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 324 agtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcg 383 |||||||||||||||| |||| ||||||||| | ||||||||||||||||| || || | Sbjct: 946 agtcgcggctcttgaaagggagggccctgatgatgaccacgtggtagatggcggcaagag 887 Query: 384 ccgcgccggtgaacgggcccacccag 409 | || ||| |||| ||||| |||||| Sbjct: 886 cagcaccgatgaaggggccaacccag 861
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 324 agtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcg 383 |||| |||||||||||||||| ||||||||| | ||||||||||||||||| || || | Sbjct: 937 agtcacggctcttgaaggggagggccctgatgatgaccacgtggtagatggcggcaagag 878 Query: 384 ccgcgccggtgaacgggcccacccag 409 | || ||| |||| ||||| |||||| Sbjct: 877 cagcaccgatgaaggggccaacccag 852
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 324 agtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcg 383 |||| |||||||||||||||| ||||||||| | ||||||||||||||||| || || | Sbjct: 370 agtcacggctcttgaaggggagggccctgatgatgaccacgtggtagatggcggcaagag 311 Query: 384 ccgcgccggtgaacgggcccacccag 409 | || ||| |||| ||||| |||||| Sbjct: 310 cagcaccgatgaaggggccaacccag 285
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 333 tcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgccgg 392 ||||||| ||||| || ||||| |||||| |||||||||||| |||||||| |||||| Sbjct: 926 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 867 Query: 393 tgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 866 tgaaggggccgacccag 850
>gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein ZmPIP1-6 mRNA, complete cds Length = 1325 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgccggt 393 |||||||||||||||||||| || ||| |||||| | ||||| |||||||| |||| Sbjct: 1074 cttgaaggggatggccctgaggacgacctggtggtacaccgccgcaagcgccgctccggc 1015 Query: 394 gaacgggcccacccag 409 |||||||||||||||| Sbjct: 1014 gaacgggcccacccag 999
>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic protein, complete cds Length = 1223 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 |||||| ||||||||||||||||| ||||||||||| Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtggta 909
>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic protein, complete cds Length = 1260 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 |||||| ||||||||||||||||| ||||||||||| Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtggta 913
>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds Length = 1298 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||| ||||||||||||||||| |||||||| Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtggta 881
>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein 1-1, complete cds Length = 1351 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 |||||| ||||||||||||||||| ||||||||||| Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtggta 1050
>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds Length = 423 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||||||||| | |||| |||||||||||| || || || ||||| Sbjct: 414 gctcttgaacgggatggccctgatgatcacctggtggtagatggcggctagggcagcgcc 355 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 354 aatgaaggggccgacccag 336
>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds Length = 539 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccag 381 ||||||||| |||||||||||||| | |||| |||||||||||| ||||| Sbjct: 346 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccag 296
>gb|AF131201.1| Zea mays plasma membrane MIP protein (pip1-2) mRNA, complete cds Length = 1280 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| |||||||| ||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 921 gctcttgaacgggatggctctgatgatcacctggtggtagatggcagccagggcagcgcc 862 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 861 aatgaaggggccgacccag 843
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgctc 176 |||||||||||||||||||||||||| Sbjct: 111061 acacacacacgctcgctcgctcgctc 111036
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgctc 176 |||||||||||||||||||||||||| Sbjct: 25253 acacacacacgctcgctcgctcgctc 25228
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 151 acacacacacgctcgctcgctcgctc 176 |||||||||||||||||||||||||| Sbjct: 138231 acacacacacgctcgctcgctcgctc 138256
>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin Length = 1291 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 364 gtggtagatggccgccagcgccgcgccggtgaacgggcccacccag 409 |||||||||||| |||||||| |||||| |||| ||||| |||||| Sbjct: 1288 gtggtagatggcggccagcgcggcgccgatgaaggggccgacccag 1243
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgctc 176 |||||||||||||||||||||||||| Sbjct: 26872821 acacacacacgctcgctcgctcgctc 26872796
>ref|NM_014978.1| Homo sapiens sortilin-related VPS10 domain containing receptor 3 (SORCS3), mRNA Length = 5757 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 150 tacacacacacgctcgctcgctcgc 174 ||||||||||||||||||||||||| Sbjct: 118 tacacacacacgctcgctcgctcgc 142
>gb|AY491806.1| Euphydryas aurinia clone EA26 microsatellite sequence Length = 429 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 153 acacacacgctcgctcgctcgctca 177 ||||||||||||||||||||||||| Sbjct: 315 acacacacgctcgctcgctcgctca 291
>emb|AL355350.8| Human DNA sequence from clone RP11-483B5 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and a CpG island, complete sequence Length = 153764 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 150 tacacacacacgctcgctcgctcgc 174 ||||||||||||||||||||||||| Sbjct: 85719 tacacacacacgctcgctcgctcgc 85743
>emb|AL161646.10| Human DNA sequence from clone RP11-127O4 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and one CpG island, complete sequence Length = 183833 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 150 tacacacacacgctcgctcgctcgc 174 ||||||||||||||||||||||||| Sbjct: 171862 tacacacacacgctcgctcgctcgc 171886
>dbj|AB028982.1| Homo sapiens mRNA for KIAA1059 protein, complete cds Length = 5757 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 150 tacacacacacgctcgctcgctcgc 174 ||||||||||||||||||||||||| Sbjct: 118 tacacacacacgctcgctcgctcgc 142
>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS Length = 1139 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 885 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 826
>gb|AC104538.2| Homo sapiens chromosome 19 clone CTB-66B24, complete sequence Length = 54423 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 cacacacgctcgctcgctcgctca 177 |||||||||||||||||||||||| Sbjct: 49593 cacacacgctcgctcgctcgctca 49570
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 37291 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 37232
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 118844 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 118785
>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full insert sequence Length = 1128 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full insert sequence Length = 1205 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 973 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 914
>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full insert sequence Length = 1136 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds Length = 1140 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 913 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 854
>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel protein, complete cds Length = 1116 Score = 48.1 bits (24), Expect = 0.022 Identities = 51/60 (85%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| ||||| |||||||| | |||| |||||||||||| ||||| || ||||| Sbjct: 916 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 857
>ref|XM_473480.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 840 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 781 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 780 aatgaaggggccaacccag 762
>gb|AC186368.1| Pan troglodytes chromosome 7 clone CH251-329G12, complete sequence Length = 146205 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 136 acaacactgaaagatacacacac 158 ||||||||||||||||||||||| Sbjct: 91606 acaacactgaaagatacacacac 91628
>emb|AL359273.11| Human DNA sequence from clone RP11-376N17 on chromosome 1 Contains the gene for dnaj-like protein (LOC148418), the urate oxidase (UOX) pseudogene, a novel pseudogene and the gene for DNase II-like acid DNase (DLAD), complete sequence Length = 205034 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 136 acaacactgaaagatacacacac 158 ||||||||||||||||||||||| Sbjct: 119566 acaacactgaaagatacacacac 119588
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 28671 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 28612 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 28611 aatgaaggggccaacccag 28593
>emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in linkage group 1, complete sequence Length = 173643 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcg 173 ||||||||||||||||||||||| Sbjct: 91070 acacacacacgctcgctcgctcg 91048
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 28021445 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 28021386 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 28021385 aatgaaggggccaacccag 28021367
>dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane intrinsic protein 1;1, complete cds Length = 1096 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 ttgaaggggatggccctgatcaccaccacgtggta 369 ||||| || ||||||||||||||||| |||||||| Sbjct: 933 ttgaatggaatggccctgatcaccacgacgtggta 899
>emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in linkage group 4, complete sequence Length = 218203 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgctca 177 ||||||||| ||||||||||||||||| Sbjct: 110228 acacacacatgctcgctcgctcgctca 110202
>dbj|AK104736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D02, full insert sequence Length = 1163 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 917 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 858 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 857 aatgaaggggccaacccag 839
>dbj|AK098849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E16, full insert sequence Length = 1164 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 918 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 859 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 858 aatgaaggggccaacccag 840
>dbj|AK065188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E02, full insert sequence Length = 1167 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 920 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 861 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 860 aatgaaggggccaacccag 842
>emb|BX649324.3| Zebrafish DNA sequence from clone DKEY-85M15 in linkage group 4, complete sequence Length = 218137 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgctca 177 ||||||||| ||||||||||||||||| Sbjct: 109740 acacacacatgctcgctcgctcgctca 109714
>dbj|AK058323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B07, full insert sequence Length = 1462 Score = 46.1 bits (23), Expect = 0.089 Identities = 65/79 (82%) Strand = Plus / Minus Query: 331 gctcttgaaggggatggccctgatcaccaccacgtggtagatggccgccagcgccgcgcc 390 ||||||||| || || |||||||| |||||| |||||||||||| || || || ||||| Sbjct: 1216 gctcttgaatggaattgccctgatgaccacctggtggtagatggcagcaagggcagcgcc 1157 Query: 391 ggtgaacgggcccacccag 409 |||| ||||| |||||| Sbjct: 1156 aatgaaggggccaacccag 1138
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gatggccgccagcgccgcgccg 391 |||||||||||||||||||||| Sbjct: 3057077 gatggccgccagcgccgcgccg 3057098
>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence Length = 195851 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 135 gacaacactgaaagatacacacacac 160 |||||||| ||||||||||||||||| Sbjct: 159278 gacaacacagaaagatacacacacac 159253
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 gatggccgccagcgccgcgccggtga 395 ||||||||||||||||||| |||||| Sbjct: 300826 gatggccgccagcgccgcgtcggtga 300851
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 370 gatggccgccagcgccgcgccggtga 395 ||||||||||||||||||| |||||| Sbjct: 65494 gatggccgccagcgccgcgtcggtga 65519 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gatggccgccagcgccgcgc 389 |||||||||||||||||||| Sbjct: 127863 gatggccgccagcgccgcgc 127882
>gb|AF386739.1|AF386739 Medicago truncatula aquaporin protein PIP1;1 (PIP1;1) mRNA, complete cds Length = 1244 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggtaga 371 ||||||||| ||||| ||||| || ||||||||||||| Sbjct: 915 cttgaagggaatggctctgattacaaccacgtggtaga 878
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 acacacgctcgctcgctcgctc 176 |||||||||||||||||||||| Sbjct: 20645192 acacacgctcgctcgctcgctc 20645171
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 acacacgctcgctcgctcgctc 176 |||||||||||||||||||||| Sbjct: 107168 acacacgctcgctcgctcgctc 107147
>emb|BX296535.7| Zebrafish DNA sequence from clone CH211-234I2, complete sequence Length = 163120 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 attccatggctgattgagtata 321 |||||||||||||||||||||| Sbjct: 50610 attccatggctgattgagtata 50631
>ref|XM_521598.1| PREDICTED: Pan troglodytes similar to bA127O4.1 (KIAA1059 protein) (LOC466196), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 tacacacacacgctcgctcgctcgc 174 ||||||||| ||||||||||||||| Sbjct: 1304 tacacacactcgctcgctcgctcgc 1328
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacgctcgctcgctcgctc 176 ||||||||||||||||||||| Sbjct: 102172 cacacgctcgctcgctcgctc 102152
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacgctcgctcgctcgctc 176 ||||||||||||||||||||| Sbjct: 24868 cacacgctcgctcgctcgctc 24848
>gb|AC004849.1| Homo sapiens PAC clone RP4-659J6 from 7, complete sequence Length = 126801 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgct 171 ||||||||||||||||||||| Sbjct: 10108 acacacacacgctcgctcgct 10088
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tttgggtaggtgcagtgaaga 112 ||||||||||||||||||||| Sbjct: 131923 tttgggtaggtgcagtgaaga 131943
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gatggccgccagcgccgcgcc 390 ||||||||||||||||||||| Sbjct: 310616 gatggccgccagcgccgcgcc 310596 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gatggccgccagcgccgcgc 389 |||||||||||||||||||| Sbjct: 14637 gatggccgccagcgccgcgc 14656
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 gatggccgccagcgccgcgcc 390 ||||||||||||||||||||| Sbjct: 256065 gatggccgccagcgccgcgcc 256045
>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene) Length = 1089 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 333 tcttgaaggggatggccctgatcaccaccacgtggta 369 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 841 tcttgaatgggatagctctgatcaccaccacatggta 805
>gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138B18, complete sequence Length = 160852 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 catccattccatggctgattg 315 ||||||||||||||||||||| Sbjct: 47541 catccattccatggctgattg 47561
>gb|AC018465.8| Homo sapiens BAC clone RP11-350D5 from 2, complete sequence Length = 167073 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcattccttgttattttatac 38 ||||||||||||||||||||| Sbjct: 137409 tcattccttgttattttatac 137389
>emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on chromosome 12, complete sequence Length = 167603 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 acacacacacgctcgctcgctcgct 175 |||||||||||| |||||||||||| Sbjct: 89328 acacacacacgcacgctcgctcgct 89352
>ref|NM_116008.2| Arabidopsis thaliana PIP1A; water channel AT3G61430 (PIP1A) mRNA, complete cds Length = 1254 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 1032 cttgaaggggatggctctgatgacaaccacatggta 997
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tgaaagatacacacacacgc 162 |||||||||||||||||||| Sbjct: 111426 tgaaagatacacacacacgc 111407
>ref|XM_633657.1| Dictyostelium discoideum hypothetical protein (DDB0185844), partial mRNA Length = 1902 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 aaatgatggttgatgaacaa 279 |||||||||||||||||||| Sbjct: 849 aaatgatggttgatgaacaa 830
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggccgccagcgccgcgccgg 392 |||||||||||||||||||| Sbjct: 486947 ggccgccagcgccgcgccgg 486928
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 acacacacgctcgctcgctcgctc 176 |||||| ||||||||||||||||| Sbjct: 80167 acacacgcgctcgctcgctcgctc 80190
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggccgccagcgccgcgccggtgaa 396 |||||| ||||||||||||||||| Sbjct: 2951316 ggccgcgagcgccgcgccggtgaa 2951293
>gb|AC145905.4| Pan troglodytes BAC clone RP43-9I21 from 7, complete sequence Length = 187893 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 acaacactgaaagatacacacaca 159 |||| ||||||||||||||||||| Sbjct: 101375 acaaaactgaaagatacacacaca 101352
>emb|AJ312850.1|RSE312850 Rhodeus sericeus microsatellite DNA Rser 10, clone BITT2E01 Length = 264 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 cacacacgctcgctcgctcgctca 177 ||||||||| |||||||||||||| Sbjct: 57 cacacacgcgcgctcgctcgctca 34
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 actgaaagatacacacacac 160 |||||||||||||||||||| Sbjct: 57604 actgaaagatacacacacac 57585
>ref|XM_948657.1| Theileria annulata strain Ankara hypothetical protein (TA16895) partial mRNA Length = 1734 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gatggccctgatcaccacca 362 |||||||||||||||||||| Sbjct: 760 gatggccctgatcaccacca 741
>ref|XM_674483.1| Plasmodium berghei strain ANKA hypothetical protein (PB000747.02.0) partial mRNA Length = 2235 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tcgttaattcgatcttcatt 22 |||||||||||||||||||| Sbjct: 1403 tcgttaattcgatcttcatt 1384
>emb|AL445673.9| Human DNA sequence from clone RP1-45C12 on chromosome 1 Contains part of the FMO1 gene for flavin containing monooxygenase 1 and the 5' end of a novel gene, complete sequence Length = 13892 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tccatccattccatggctga 312 |||||||||||||||||||| Sbjct: 5537 tccatccattccatggctga 5556
>emb|AL162455.14| Human DNA sequence from clone RP11-62D23 on chromosome 13 Contains part of the GPC6 gene for glypican 6 and a novel gene, complete sequence Length = 173736 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 acaacactgaaagatacaca 155 |||||||||||||||||||| Sbjct: 132503 acaacactgaaagatacaca 132484
>emb|X87608.2|RPNODHPQG Rhizobium tropici nodI, nodJ, nodH, nodP and nodQ genes, and ORF1 for putative aldo-keto reductase Length = 6013 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 acacgctcgctcgctcgctc 176 |||||||||||||||||||| Sbjct: 3021 acacgctcgctcgctcgctc 3040
>emb|X75881.1|ATPIP1A A.thaliana mRNA for plasma membrane intrinsic protein 1a Length = 1107 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 900 cttgaaggggatggctctgatgacaaccacatggta 865
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggccgccagcgccgcgccggtgaa 396 |||||| ||||||||||||||||| Sbjct: 1129847 ggccgcgagcgccgcgccggtgaa 1129824
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 29242 cttgaaggggatggctctgatgacaaccacatggta 29207
>emb|AJ289701.1|VFA289701 Vicia faba mRNA for aquaporin (aq1 gene) Length = 995 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 936 cttgaaggggatggctctgatgacaaccacatggta 901
>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2 Length = 1189 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 |||||| || |||||||| ||||| ||||||||||| Sbjct: 920 cttgaatggaatggcccttatcacaaccacgtggta 885
>emb|BX548059.13| Zebrafish DNA sequence from clone DKEYP-80D11 in linkage group 12, complete sequence Length = 205581 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 acacacacacgctcgctcgc 170 |||||||||||||||||||| Sbjct: 176269 acacacacacgctcgctcgc 176288
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ggccgccagcgccgcgccgg 392 |||||||||||||||||||| Sbjct: 270176 ggccgccagcgccgcgccgg 270195
>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12, complete sequence Length = 155592 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 aacgtagacaacactgaaag 148 |||||||||||||||||||| Sbjct: 67604 aacgtagacaacactgaaag 67585
>dbj|AB242853.1| Quercus mongolica var. crispula DNA, microsatellite marker: bcqm76 Length = 396 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttccatggctgattgagtat 320 |||||||||||||||||||| Sbjct: 255 ttccatggctgattgagtat 274
>dbj|AK128557.1| Homo sapiens cDNA FLJ46716 fis, clone TRACH3018108, highly similar to 51 kDa FK506-binding protein Length = 3530 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cacgctcgctcgctcgctca 177 |||||||||||||||||||| Sbjct: 50 cacgctcgctcgctcgctca 31
>gb|AY097398.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 861 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 849 cttgaaggggatggctctgatgacaaccacatggta 814
>gb|AC109600.2| Homo sapiens chromosome 16 clone RP11-7O14, complete sequence Length = 142464 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatactacatgcattgctta 53 |||||||||||||||||||| Sbjct: 94128 tatactacatgcattgctta 94147
>gb|AC023823.7| Homo sapiens chromosome 16 clone RP11-163K4, complete sequence Length = 155180 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tatactacatgcattgctta 53 |||||||||||||||||||| Sbjct: 56174 tatactacatgcattgctta 56193
>gb|AF390559.1|AF390559 Sphyraena idiastes cytosolic malate dehydrogenase thermostable form (cMDH-S) mRNA, complete cds Length = 1474 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgc 174 |||||||||| ||||||||||||| Sbjct: 1266 acacacacacactcgctcgctcgc 1243
>gb|AY058113.1| Arabidopsis thaliana AT3g61430/F2A19_30 mRNA, complete cds Length = 1092 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 916 cttgaaggggatggctctgatgacaaccacatggta 881
>emb|BX001037.13| Zebrafish DNA sequence from clone DKEY-107I16 in linkage group 6, complete sequence Length = 92347 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 135 gacaacactgaaagatacacacacacgc 162 ||||||||||| ||| |||||||||||| Sbjct: 9761 gacaacactgagagacacacacacacgc 9734
>gb|AY714380.1| Aegiceras corniculatum aquaporin 1 mRNA, partial cds Length = 534 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcac 357 ||||||||| |||||||||||||| Sbjct: 528 cttgaagggtatggccctgatcac 505
>gb|AY671949.1| Aegiceras corniculatum aquaporin 1 (PIP1) mRNA, complete cds Length = 867 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcac 357 ||||||||| |||||||||||||| Sbjct: 858 cttgaagggtatggccctgatcac 835
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 ggccgccagcgccgcgccggtgaa 396 |||||| ||||||||||||||||| Sbjct: 724533 ggccgcgagcgccgcgccggtgaa 724510
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 acacacacgctcgctcgctcgctc 176 |||||| ||||||||||||||||| Sbjct: 10890647 acacacgcgctcgctcgctcgctc 10890670
>gb|AF326495.1|AF326495 Zea mays plasma membrane integral protein ZmPIP2-6 mRNA, complete cds Length = 1257 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 382 cgccgcgccggtgaacgggcccacccag 409 |||||| ||| ||||||||||||||||| Sbjct: 879 cgccgctccgatgaacgggcccacccag 852
>emb|BX824874.1|CNS0A5T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 787 cttgaaggggatggctctgatgacaaccacatggta 752
>emb|BX824209.1|CNS0A5OV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1026 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 874 cttgaaggggatggctctgatgacaaccacatggta 839
>emb|BX823595.1|CNS0A5AA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1059 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 895 cttgaaggggatggctctgatgacaaccacatggta 860
>ref|XM_574724.1| PREDICTED: Rattus norvegicus FK506 binding protein 5 (predicted) (Fkbp5_predicted), mRNA Length = 3571 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cacgctcgctcgctcgctca 177 |||||||||||||||||||| Sbjct: 93 cacgctcgctcgctcgctca 74
>gb|AY088439.1| Arabidopsis thaliana clone 6690 mRNA, complete sequence Length = 1234 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 1032 cttgaaggggatggctctgatgacaaccacatggta 997
>gb|AC055817.12| Mus musculus, clone RP23-154I7, complete sequence Length = 203805 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 acgaaagagagggaaccaca 72 |||||||||||||||||||| Sbjct: 108423 acgaaagagagggaaccaca 108404
>gb|AF266760.1|AF266760 Vicia faba plasma membrane aquaporin mRNA, complete cds Length = 920 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 cttgaaggggatggccctgatcaccaccacgtggta 369 ||||||||||||||| ||||| || ||||| ||||| Sbjct: 895 cttgaaggggatggctctgatgacaaccacatggta 860
>gb|AC008080.1|AC008080 Homo sapiens clone RP11-89N17 from 7p14-15, complete sequence Length = 178635 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 acaacactgaaagatacacacaca 159 |||| ||||||||||||||||||| Sbjct: 51257 acaaaactgaaagatacacacaca 51234
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gccagcgccgcgccggtgaa 396 |||||||||||||||||||| Sbjct: 6728942 gccagcgccgcgccggtgaa 6728923
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 tgaaagatacacacacacgc 162 |||||||||||||||||||| Sbjct: 65479 tgaaagatacacacacacgc 65460
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 atacacacacacgctcgctc 168 |||||||||||||||||||| Sbjct: 1608 atacacacacacgctcgctc 1589
>emb|BX255922.4| Zebrafish DNA sequence from clone CH211-125A15 in linkage group 4, complete sequence Length = 155429 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 acacacacacgctcgctcgctcgc 174 |||||||||| ||||||||||||| Sbjct: 56212 acacacacacactcgctcgctcgc 56235
>emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 in linkage group 20, complete sequence Length = 208051 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 acacacacacgctcgctcgctcgc 174 |||||||||||| ||||||||||| Sbjct: 140703 acacacacacgcacgctcgctcgc 140680
>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19, complete sequence Length = 170213 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 acacacacgctcgctcgctcgctc 176 |||||||| ||||||||||||||| Sbjct: 138891 acacacacactcgctcgctcgctc 138914
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 acacacacgctcgctcgctcgctc 176 |||||| ||||||||||||||||| Sbjct: 10969836 acacacgcgctcgctcgctcgctc 10969859
>emb|AL714010.11| Mouse DNA sequence from clone RP23-455F14 on chromosome X, complete sequence Length = 118604 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 acgaaagagagggaaccaca 72 |||||||||||||||||||| Sbjct: 111772 acgaaagagagggaaccaca 111791
>gb|U47272.1|RTU47272 Rhizobium tropici nodulation protein nodH, nodP and nodQ genes, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 acacgctcgctcgctcgctc 176 |||||||||||||||||||| Sbjct: 1050 acacgctcgctcgctcgctc 1069
>gb|AY879266.1| Homo sapiens flavin containing monooxygenase 1 (FMO1) gene, complete cds Length = 38506 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tccatccattccatggctga 312 |||||||||||||||||||| Sbjct: 4162 tccatccattccatggctga 4181
>gb|M69036.1|AFAPHBHI Alcaligenes eutrophus protein H (phbH) and protein I (phbI) genes, complete cds Length = 4501 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggccgccagcgccgcgccgg 392 |||||||||||||||||||| Sbjct: 2267 ggccgccagcgccgcgccgg 2248 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,841,348 Number of Sequences: 3902068 Number of extensions: 3841348 Number of successful extensions: 80062 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79230 Number of HSP's gapped (non-prelim): 827 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
