Clone Name | rbart15b09 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 35.0 bits (79), Expect = 0.10 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 9/67 (13%) Frame = -2 Query: 453 YGFSTNLRACCGAGGGKYNYQNXXXXXXXXXXXXXXX---------XXXXSWDGIHLTEA 301 +GF +L +CCG GGKYNY WDG+H T+A Sbjct: 294 HGFKGSLVSCCG-HGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQA 352 Query: 300 AYKKIAD 280 A K I D Sbjct: 353 ANKFIFD 359
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 35.0 bits (79), Expect = 0.10 Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 9/86 (10%) Frame = -2 Query: 474 MVKSPASYGFSTNLRACCGAGGGKYNYQNXXXXXXXXXXXXXXXXXXXS---------WD 322 + P +GF L CCG GG KYN+ S WD Sbjct: 289 LFSEPEKHGFEFPLITCCGYGG-KYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWD 347 Query: 321 GIHLTEAAYKKIADGWVNGPYCHPAI 244 G H TEAA + D G + P + Sbjct: 348 GAHYTEAANEYFFDQISTGAFSDPPV 373
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/63 (28%), Positives = 25/63 (39%) Frame = -2 Query: 474 MVKSPASYGFSTNLRACCGAGGGKYNYQNXXXXXXXXXXXXXXXXXXXSWDGIHLTEAAY 295 M+++PA+YGF + CC G WDG+H T+ AY Sbjct: 462 MLETPAAYGFEETKKPCCKTG----LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAY 517 Query: 294 KKI 286 K I Sbjct: 518 KTI 520
>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)| (Endo-1,4-beta-glucanase) (Cellulase) (Fragment) Length = 224 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 Query: 327 WDGIHLTEAAYKKIADGW 274 WDG+HL+E Y KIA+ W Sbjct: 116 WDGLHLSEIGYTKIANIW 133
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = -2 Query: 474 MVKSPASYGFSTNLRACCGAG---GGKYNYQNXXXXXXXXXXXXXXXXXXXSWDGIHLTE 304 M++SP YGF + CC G GG + + WDG+H ++ Sbjct: 379 MLESPEDYGFEEIKKPCCKIGLTKGGVFCKER-------TLKNMSNASSYLFWDGLHPSQ 431 Query: 303 AAYK 292 AY+ Sbjct: 432 RAYE 435
>P53_CANFA (Q29537) Cellular tumor antigen p53 (Tumor suppressor p53)| Length = 381 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +2 Query: 287 IFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPFW*LYLPPPAPQ 424 + L + V W+ D +P AP P AP W L P+P+ Sbjct: 43 LLLPESVVNWLDEDSDDAPRMPATSAPTAPGPAPSWPLSSSVPSPK 88
>LGB3_MEDSA (P14962) Leghemoglobin-3 (Leghemoglobin III)| Length = 146 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 253 PGHSVLVLVLVLERAPASGCSSVSFLEAGEGRGGSP 146 PG+SVL ++LE+APA+ SFL+ G SP Sbjct: 22 PGNSVLFYTIILEKAPAAK-GMFSFLKDSAGVQDSP 56
>KIF17_MOUSE (Q99PW8) Kinesin-like protein KIF17 (MmKIF17)| Length = 1038 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +2 Query: 272 TQPSAIFLYAASVRWMPSQLSDDDGLPHADAPDMPHRAPF 391 T P Y S + S LS++ LP P+MP PF Sbjct: 973 TDPMKSLTYHNSPPGLNSSLSNNSALPPTQTPEMPQPRPF 1012 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,770,862 Number of Sequences: 219361 Number of extensions: 1023878 Number of successful extensions: 2883 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2878 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)