ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart15b09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA sequence Length = 1334 Score = 381 bits (192), Expect = e-102 Identities = 231/244 (94%) Strand = Plus / Minus Query: 235 ctaggacagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttctt 294 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1124 ctaggagaggatggccgggtggcagtagggcccgttgacccagccgtcggcgatcttctt 1065 Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| Sbjct: 1064 gtaggccgcctccgtcaggtggatcccgtcccagctcagcgacgacgatgggttgccgca 1005 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcc 414 |||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 1004 cgccgacgcgccggacatgccgcacctagccccgttctggtagttgtacttgccgccgcc 945 Query: 415 cgcgccgcagcacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccat 474 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 944 cgcgccgcagcacgccctcaggttcgtgctgaacccgtagctagcggggctcttgaccat 885 Query: 475 gtcg 478 |||| Sbjct: 884 gtcg 881 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/57 (85%), Gaps = 6/57 (10%) Strand = Plus / Minus Query: 34 cgcaaattacacgagaatcaatcaaattcaaaccgatgcttattcttgcaacacatc 90 |||||||||||||||||| |||||||| ||||||||||||| |||||||||| Sbjct: 1285 cgcaaattacacgagaattaatcaaat------cgatgcttattctcgcaacacatc 1235 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 162 ccctccccagcttcgaggaaggaaa 186 |||||||||||||||||||| |||| Sbjct: 1189 ccctccccagcttcgaggaatgaaa 1165
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 281 bits (142), Expect = 1e-72 Identities = 211/234 (90%) Strand = Plus / Minus Query: 245 atggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcc 304 ||||||||||||||||| | |||| ||||||||||||||||||||||| | ||||||||| Sbjct: 1149 atggccgggtggcagtaggccccgctgacccagccgtcggcgatcttcctatacgccgcc 1090 Query: 305 tccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcg 364 |||||||||||||||||||||||||| |||||||||| |||| |||||| ||||| Sbjct: 1089 tccgtcaggtggatgccgtcccagctgagcgacgacgccgggtcagagcacgcgtacgcg 1030 Query: 365 cccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcag 424 || | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1029 ccgggcatgccgcaccgcgcgccgttctggtagttgtacttgccgccgccggcgccgcag 970 Query: 425 cacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 || ||||| ||||| |||||||||||||||||| |||||||||| ||||||||| Sbjct: 969 caggccctgaggttggtgctgaacccgtagctgccggggctcttcaccatgtcg 916
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full insert sequence Length = 1430 Score = 248 bits (125), Expect = 1e-62 Identities = 203/229 (88%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1133 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1074 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 1073 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1014 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1013 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 954 Query: 430 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 ||||| |||||||| ||||||||| ||| |||| |||||||||||| Sbjct: 953 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcg 905
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full insert sequence Length = 1429 Score = 248 bits (125), Expect = 1e-62 Identities = 203/229 (88%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1132 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1073 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 1072 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1013 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1012 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 953 Query: 430 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 ||||| |||||||| ||||||||| ||| |||| |||||||||||| Sbjct: 952 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcg 904
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full insert sequence Length = 1417 Score = 248 bits (125), Expect = 1e-62 Identities = 203/229 (88%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1130 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1071 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 1070 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1011 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1010 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 951 Query: 430 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 ||||| |||||||| ||||||||| ||| |||| |||||||||||| Sbjct: 950 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcg 902
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full insert sequence Length = 1450 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 1130 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 1071 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 1070 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 1011 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| ||||||||||||||||| |||||| || || ||||| ||||||||||| Sbjct: 1010 catgccgcacctcgcgccgttctggtagtagtacttccctcctcccgccccgcagcacgc 951 Query: 430 cctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 ||||| |||||||| ||||||||| ||| |||| |||||||||||| Sbjct: 950 cctcaaattcgtgctaaacccgtagttggagggggatttgaccatgtcg 902
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 2894499 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 2894440 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 2894439 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 2894380 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 2894379 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 2894320 Query: 430 cctcaggttcgtgctgaaccc 450 ||||| |||||||| ||||| Sbjct: 2894319 cctcaaattcgtgctaaaccc 2894299 Score = 87.7 bits (44), Expect = 3e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 257 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 316 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 2907358 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 2907417 Query: 317 atgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccgacatgccg 376 |||||||||||||| || ||||| |||| || |||||| || ||||| ||||| || Sbjct: 2907418 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 2907477 Query: 377 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacg 428 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| Sbjct: 2907478 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacg 2907529 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 394 gtagttgtacttgcccccgcccgcgccgcagcacgccct 432 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 28598037 gtagttgtactcgccgccgccggcgccgcagcacgccct 28598075 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 352 gcacgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgccccc 411 |||||||| ||||||| ||| ||||||||||| || || ||||||||||| || || Sbjct: 2899277 gcacgccgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgcc 2899218 Query: 412 gcccgcgccgcagcacgcc 430 ||| ||||||||||||||| Sbjct: 2899217 gccggcgccgcagcacgcc 2899199 Score = 54.0 bits (27), Expect = 4e-04 Identities = 152/191 (79%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 241 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 300 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 1572797 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 1572738 Query: 301 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggctgccgcacgccg 359 |||||||||| ||| ||||||||||| || || || ||||||| || ||||||| | Sbjct: 1572737 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 1572679 Query: 360 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 419 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 1572678 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 1572619 Query: 420 cgcagcacgcc 430 ||||||||||| Sbjct: 1572618 cgcagcacgcc 1572608 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 308 gtcaggtggatgccgtcccagctcagcgacgacgacggg 346 |||| |||||||||||||||||||| ||||||||||| Sbjct: 19518652 gtcatgtggatgccgtcccagctcacgtacgacgacggg 19518690 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactagga 240 |||||||||||||||||||||| Sbjct: 4780543 aggactaggactaggactagga 4780522 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 18634548 gatcctcccctcccctcccc 18634567
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 137980 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 137921 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 137920 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 137861 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 137860 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 137801 Query: 430 cctcaggttcgtgctgaaccc 450 ||||| |||||||| ||||| Sbjct: 137800 cctcaaattcgtgctaaaccc 137780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 352 gcacgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgccccc 411 |||||||| ||||||| ||| ||||||||||| || || ||||||||||| || || Sbjct: 142758 gcacgccgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgcc 142699 Query: 412 gcccgcgccgcagcacgcc 430 ||| ||||||||||||||| Sbjct: 142698 gccggcgccgcagcacgcc 142680
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 232 bits (117), Expect = 8e-58 Identities = 180/201 (89%) Strand = Plus / Minus Query: 250 cgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgt 309 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct: 54645 cgggtggcagtagggcccgttgacccacccgtcggcgatctgcttgtacgccgcctccgt 54586 Query: 310 caggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccga 369 || ||||||||||||||||||| ||||||||||||| || |||||| | || ||||| Sbjct: 54585 gagatggatgccgtcccagctcaacgacgacgacgggttggagcacgcgtaggctcccga 54526 Query: 370 catgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||| |||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 54525 catgccgcacctcgcgccgttctggtagttgtacttccctcctcccgccccgcagcacgc 54466 Query: 430 cctcaggttcgtgctgaaccc 450 ||||| |||||||| ||||| Sbjct: 54465 cctcaaattcgtgctaaaccc 54445 Score = 87.7 bits (44), Expect = 3e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 257 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 316 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 67504 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 67563 Query: 317 atgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccgacatgccg 376 |||||||||||||| || ||||| |||| || |||||| || ||||| ||||| || Sbjct: 67564 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 67623 Query: 377 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacg 428 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| Sbjct: 67624 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacg 67675 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 352 gcacgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgccccc 411 |||||||| ||||||| ||| ||||||||||| || || ||||||||||| || || Sbjct: 59423 gcacgccgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgcc 59364 Query: 412 gcccgcgccgcagcacgcc 430 ||| ||||||||||||||| Sbjct: 59363 gccggcgccgcagcacgcc 59345
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 202 bits (102), Expect = 8e-49 Identities = 201/234 (85%) Strand = Plus / Minus Query: 245 atggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcc 304 ||||| ||| ||||||| |||||||||| ||||||||||| ||||| |||||| || ||| Sbjct: 1188 atggcggggcggcagtagggcccgttgagccagccgtcggtgatctgcttgtaggcggcc 1129 Query: 305 tccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcg 364 || || |||||||||||||||||||| || ||||| ||||||| |||||| |||||| Sbjct: 1128 tcggtgaggtggatgccgtcccagctgaggtgcgacgccgggctggagcacgcggacgcg 1069 Query: 365 cccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcag 424 |||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||| Sbjct: 1068 cccgacatgccgcaccgcgcgctgttctggtagttgtacttgccgccccccgacccgcag 1009 Query: 425 cacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 |||||| | || |||||||||||||||| ||||| |||||||||||||| Sbjct: 1008 cacgcctggaacaccgagctgaacccgtagctgccggggttcttgaccatgtcg 955
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 129 bits (65), Expect = 9e-27 Identities = 140/165 (84%) Strand = Plus / Minus Query: 266 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 325 ||||||| ||||||||||| ||||| |||||| || ||||| || ||||||||||||||| Sbjct: 1216 ccgttgagccagccgtcggtgatctgcttgtaggcggcctcggtgaggtggatgccgtcc 1157 Query: 326 cagctcagcgacgacgacgggctgccgcacgccgacgcgcccgacatgccgcaccgcgcg 385 ||||| || ||||| ||||||| |||| || || ||||| |||||||||||||||||| Sbjct: 1156 cagctgaggtgcgacgccgggctggcgcaggcggaggcgccggacatgccgcaccgcgcg 1097 Query: 386 ccgttctggtagttgtacttgcccccgcccgcgccgcagcacgcc 430 | ||| ||||||||||||||| || |||| |||||||||||| Sbjct: 1096 ctgttggcgtagttgtacttgcctccccccgacccgcagcacgcc 1052
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence Length = 811 Score = 127 bits (64), Expect = 4e-26 Identities = 199/240 (82%), Gaps = 3/240 (1%) Strand = Plus / Minus Query: 242 agaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgcc 301 |||||||||||| ||||||| |||||||||| ||||||||||| ||||| ||||||||| Sbjct: 561 agaatggccgggcggcagtagggcccgttgagccagccgtcggtgatctgcttgtacgcg 502 Query: 302 gcctccgtcaggtggatgccgtcccagctcagcgacgacg-acgggctgccgcacgccga 360 ||||| || |||||||||||||||||||| || || || |||| || |||||| || Sbjct: 501 gcctcggtgaggtggatgccgtcccagctgaggtgcgccgcccgggttggagcacgcgga 442 Query: 361 cgcgccc-gacatgccgca-ccgcgcgccgttctggtagttgtacttgcccccgcccgcg 418 |||||| | ||||||||| |||||||| ||||||||||||||||||||| || || | Sbjct: 441 ggcgcccgggcatgccgcacccgcgcgctgttctggtagttgtacttgccgcctccggac 382 Query: 419 ccgcagcacgccctcaggttcgtgctgaacccgtagctggcggggctcttgaccatgtcg 478 |||||||||| | | ||||||||||||||||||| | || |||||||||||||| Sbjct: 381 ccgcagcacgtctggaacgccgtgctgaacccgtagctgcctggattcttgaccatgtcg 322
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full insert sequence Length = 1392 Score = 87.7 bits (44), Expect = 3e-14 Identities = 140/172 (81%) Strand = Plus / Minus Query: 257 cagtacggcccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtgg 316 |||||||| ||||||| ||||||||| | ||||| |||||| || ||||| || |||||| Sbjct: 1074 cagtacgggccgttgagccagccgtcagtgatctgcttgtaagctgcctcggtgaggtgg 1015 Query: 317 atgccgtcccagctcagcgacgacgacgggctgccgcacgccgacgcgcccgacatgccg 376 |||||||||||||| || ||||| |||| || |||||| || ||||| ||||| || Sbjct: 1014 atgccgtcccagctaagatgcgacgccgggttggagcacgctgatgcgcctgacatccca 955 Query: 377 caccgcgcgccgttctggtagttgtacttgcccccgcccgcgccgcagcacg 428 |||| |||| ||| | ||||||| ||||||| ||||| | |||||||||| Sbjct: 954 cacctcgcgttgttgttgtagttgaacttgccgccgcctgacccgcagcacg 903
>ref|XM_466655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 396 agttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||||| |||||||||||||||||||| Sbjct: 1039 agttgtacttgccgccgcccgcgccgcagcacgc 1006
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 396 agttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||||| |||||||||||||||||||| Sbjct: 23912824 agttgtacttgccgccgcccgcgccgcagcacgc 23912857 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 cgtcaggtggatgccgtcccagctca 332 ||||||||||| |||||||||||||| Sbjct: 23682105 cgtcaggtggacgccgtcccagctca 23682130
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 396 agttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||||| |||||||||||||||||||| Sbjct: 134490 agttgtacttgccgccgcccgcgccgcagcacgc 134523
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 396 agttgtacttgcccccgcccgcgccgcagcacgc 429 ||||||||||||| |||||||||||||||||||| Sbjct: 46788 agttgtacttgccgccgcccgcgccgcagcacgc 46821
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA Length = 1110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 1034 gccgcctccgtgaggtggatgccgtcccagct 1003
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 1061 gccgcctccgtgaggtggatgccgtcccagct 1030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 6380761 gccgcctccgtgaggtggatgccgtcccagct 6380730 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 6365981 gccgcctccgtgaggtggatgccgtcccagct 6365950 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||||||||||| |||||||||| Sbjct: 6362381 gccgcctccgtcaggtggacgccgtcccag 6362352 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||||||||||||| Sbjct: 6342892 gccgcctccgtgaggtggatgccgtcccag 6342863 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 6321000 gcctccgtcaggtggacgccgtcccag 6320974 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 6282169 cgcctcggtgaggtggatgccgtcccagctc 6282139 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||| ||||||||| Sbjct: 6356916 gccgcctccgtgaggtggatcccgtcccag 6356887 Score = 40.1 bits (20), Expect = 6.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 |||||||||||| || ||||| | |||||||||| ||| ||| ||||||| |||||| Sbjct: 6305209 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 6305150 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgc 386 | | | | | |||| |||||||||| |||||| Sbjct: 6305149 cacggtcacccccgccatgccgcactgcgcgc 6305118
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 3156 gccgcctccgtgaggtggatgccgtcccagct 3125
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 151827 gccgcctccgtgaggtggatgccgtcccagct 151796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccagct 330 ||||||||||| |||||||||||||||||||| Sbjct: 137047 gccgcctccgtgaggtggatgccgtcccagct 137016 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||||||||||| |||||||||| Sbjct: 133447 gccgcctccgtcaggtggacgccgtcccag 133418 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||||||||||||| Sbjct: 113958 gccgcctccgtgaggtggatgccgtcccag 113929 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 92066 gcctccgtcaggtggacgccgtcccag 92040 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 53235 cgcctcggtgaggtggatgccgtcccagctc 53205 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||| ||||||||| Sbjct: 127982 gccgcctccgtgaggtggatcccgtcccag 127953 Score = 40.1 bits (20), Expect = 6.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 |||||||||||| || ||||| | |||||||||| ||| ||| ||||||| |||||| Sbjct: 76275 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 76216 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgc 386 | | | | | |||| |||||||||| |||||| Sbjct: 76215 cacggtcacccccgccatgccgcactgcgcgc 76184
>ref|NM_185495.1| Oryza sativa (japonica cultivar-group), Ozsa8592 predicted mRNA Length = 642 Score = 54.0 bits (27), Expect = 4e-04 Identities = 152/191 (79%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 241 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 300 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 636 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 577 Query: 301 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggctgccgcacgccg 359 |||||||||| ||| ||||||||||| || || || ||||||| || ||||||| | Sbjct: 576 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 518 Query: 360 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 419 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 517 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 458 Query: 420 cgcagcacgcc 430 ||||||||||| Sbjct: 457 cgcagcacgcc 447
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 394 gtagttgtacttgcccccgcccgcgccgcagcacgccct 432 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 89515 gtagttgtactcgccgccgccggcgccgcagcacgccct 89553
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 54.0 bits (27), Expect = 4e-04 Identities = 152/191 (79%), Gaps = 2/191 (1%) Strand = Plus / Minus Query: 241 cagaatggccgggtggcagtacggcccgttgacccagccgtcggcgatcttcttgtacgc 300 |||||||| |||||||||||| || || ||| ||||||| ||||||| | || ||| Sbjct: 101521 cagaatgggcgggtggcagtagggtcccctgagccagccgccggcgatgacccggttcgc 101462 Query: 301 cgcctccgtcaggtggatgccgtcccagctcagcgacg-acgacgggctgccgcacgccg 359 |||||||||| ||| ||||||||||| || || || ||||||| || ||||||| | Sbjct: 101461 cgcctccgtcgtgtgcgcgccgtcccagcaca-cggcgctcgacgggttggcgcacgcgg 101403 Query: 360 acgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgcccccgcccgcgc 419 |||||| ||||||||||||||| ||| || ||||||||| ||| || ||||||| Sbjct: 101402 cggcgcccctcatgccgcaccgcgccacgtactcccagttgtactcgccgccccccgcgc 101343 Query: 420 cgcagcacgcc 430 ||||||||||| Sbjct: 101342 cgcagcacgcc 101332
>dbj|AK107226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-D10, full insert sequence Length = 1439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 352 gcacgccgacgcgcccgacatgccgcaccgcgcgccgttctggtagttgtacttgccccc 411 |||||||| ||||||| ||| ||||||||||| || || ||||||||||| || || Sbjct: 1118 gcacgccgccgcgcccttcatcccgcaccgcgcctcgaactcgtagttgtactccccgcc 1059 Query: 412 gcccgcgccgcagcacgcc 430 ||| ||||||||||||||| Sbjct: 1058 gccggcgccgcagcacgcc 1040
>dbj|AK106962.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F07, full insert sequence Length = 1384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 394 gtagttgtacttgcccccgcccgcgccgcagcacgccct 432 ||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1061 gtagttgtactcgccgccgccggcgccgcagcacgccct 1023
>ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa8150 predicted mRNA Length = 1149 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||||||||||| |||||||||| Sbjct: 1073 gccgcctccgtcaggtggacgccgtcccag 1044
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||||||||||||| Sbjct: 1067 gccgcctccgtgaggtggatgccgtcccag 1038
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactaggaca 242 |||||||||||||||||||||||||| Sbjct: 940270 ctaggactaggactaggactaggaca 940295 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 940264 ctaggactaggactaggactaggac 940288
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||||||||||||| Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence Length = 847 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccagctc 331 |||||||| ||||||||||||||||||||| Sbjct: 323 gcctccgtgaggtggatgccgtcccagctc 294
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence Length = 1726 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccagctc 331 |||||||||||||| ||||||||||||||| Sbjct: 1315 gcctccgtcaggtgaatgccgtcccagctc 1286
>gb|AC116810.14| Mus musculus chromosome 1, clone RP24-355J5, complete sequence Length = 147130 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80352 ctaggactaggactaggactaggac 80328 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80346 ctaggactaggactaggactaggac 80322 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80340 ctaggactaggactaggactaggac 80316 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80334 ctaggactaggactaggactaggac 80310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80328 ctaggactaggactaggactaggac 80304 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80169 ctaggactaggactaggactaggac 80145 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 80163 ctaggactaggactaggactaggac 80139 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79977 ctaggactaggactaggactaggac 79953 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79971 ctaggactaggactaggactaggac 79947 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79965 ctaggactaggactaggactaggac 79941 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79959 ctaggactaggactaggactaggac 79935 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79953 ctaggactaggactaggactaggac 79929 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79947 ctaggactaggactaggactaggac 79923 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 79941 ctaggactaggactaggactaggac 79917 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 218 taggactaggactaggactaggac 241 |||||||||||||||||||||||| Sbjct: 80072 taggactaggactaggactaggac 80049 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactagga 240 |||||||||||||||||||||||| Sbjct: 80067 ctaggactaggactaggactagga 80044 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 218 taggactaggactaggactaggac 241 |||||||||||||||||||||||| Sbjct: 79982 taggactaggactaggactaggac 79959 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactaggac 241 ||||||||||||||||||||||| Sbjct: 80356 aggactaggactaggactaggac 80334 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactagg 239 ||||||||||||||||||||||| Sbjct: 80322 ctaggactaggactaggactagg 80300 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactaggac 241 ||||||||||||||||||||||| Sbjct: 80173 aggactaggactaggactaggac 80151 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggacta 237 ||||||||||||||||||||| Sbjct: 80157 ctaggactaggactaggacta 80137 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggacta 237 ||||||||||||||||||||| Sbjct: 79935 ctaggactaggactaggacta 79915 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 taggactaggactaggactaggac 241 ||||| |||||||||||||||||| Sbjct: 80106 taggaataggactaggactaggac 80083 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 taggactaggactaggacta 237 |||||||||||||||||||| Sbjct: 80100 taggactaggactaggacta 80081 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 taggactaggactaggactaggac 241 ||||| |||||||||||||||||| Sbjct: 80078 taggaataggactaggactaggac 80055 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactagga 240 |||||||||||||||||| ||||| Sbjct: 80061 ctaggactaggactaggaatagga 80038
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence Length = 1420 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 294 tgtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacggg 346 ||||||| || || |||| |||||||||||||||||||| ||||||||||| Sbjct: 1177 tgtacgcagcttcggtcatgtggatgccgtcccagctcacgtacgacgacggg 1125
>emb|AL161712.5|CEY66D12A Caenorhabditis elegans YAC Y66D12A, complete sequence Length = 123149 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 57242 ctaggactaggactaggactaggac 57218 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactaggac 241 ||||||||||||||||||||||||| Sbjct: 57236 ctaggactaggactaggactaggac 57212 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactaggac 241 ||||||||||||||||||||||| Sbjct: 57246 aggactaggactaggactaggac 57224 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactag 238 |||||||||||||||||||||| Sbjct: 57230 ctaggactaggactaggactag 57209
>gb|AY107619.1| Zea mays PCO073125 mRNA sequence Length = 617 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 294 tgtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacggg 346 ||||||| || || |||| |||||||||||||||||||| ||||||||||| Sbjct: 265 tgtacgcagcttcggtcatgtggatgccgtcccagctcacgtacgacgacggg 213
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 218 taggactaggactaggactaggac 241 |||||||||||||||||||||||| Sbjct: 141672 taggactaggactaggactaggac 141649 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggact 236 |||||||||||||||||||| Sbjct: 141667 ctaggactaggactaggact 141648
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1061 gcctccgtcaggtggacgccgtcccag 1035
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 1041 cgcctcggtgaggtggatgccgtcccagctc 1011
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Minus Query: 266 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 325 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 1100 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 1041 Query: 326 cag 328 ||| Sbjct: 1040 cag 1038
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Minus Query: 266 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 325 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 61884 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 61825 Query: 326 cag 328 ||| Sbjct: 61824 cag 61822 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagct 330 |||||| || |||||||||||||||||||| Sbjct: 46189 cgcctcggtgaggtggatgccgtcccagct 46160
>emb|AL031709.12|HS316G12 Human DNA sequence from clone LA16c-316G12 on chromosome 16 Contains the gene for C2 domain protein KIAA0734, the gene for a novel protein similar to predicted yeast, worm and archae-bacterial proteins, a novel gene and the 3' part of the gene for a novel protein similar to API1 and API2 (apoptosis inhibitor 1 and 2 (MIHB, MIHC, IAP1, IAP2)). Contains ESTs, a GSS and six putative CpG islands, complete sequence Length = 37476 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctccccagc 172 ||||||||||||||||||||||| Sbjct: 35497 gatcctcccctcccctccccagc 35519
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence Length = 1342 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1141 gcctccgtcaggtggacgccgtcccag 1115
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence Length = 1472 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccagctca 332 ||||| |||| |||||||||||||||||||| Sbjct: 1106 gcctcggtcatgtggatgccgtcccagctca 1076
>ref|XM_778266.1| PREDICTED: Strongylocentrotus purpuratus similar to huntingtin interacting protein B isoform 2 (LOC578079), mRNA Length = 9433 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactaggac 241 ||||||||||||||||||||||| Sbjct: 3074 aggactaggactaggactaggac 3052 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggacta 237 ||||||||||||||||||||| Sbjct: 3070 ctaggactaggactaggacta 3050
>emb|AL807372.1|NCB23E9 Neurospora crassa DNA linkage group II BAC clone B23E9 Length = 64710 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 ctctaggactaggactaggacta 237 ||||||||||||||||||||||| Sbjct: 22739 ctctaggactaggactaggacta 22717
>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 Length = 279011 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctccccagc 172 ||||||||||||||||||||||| Sbjct: 37329 gatcctcccctcccctccccagc 37351
>gb|AC117377.9| Homo sapiens 12 BAC RP11-406H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107100 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 ctaggactaggactaggactagg 239 ||||||||||||||||||||||| Sbjct: 45092 ctaggactaggactaggactagg 45070
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Minus Query: 266 ccgttgacccagccgtcggcgatcttcttgtacgccgcctccgtcaggtggatgccgtcc 325 ||||||| ||||||| |||||| | |||||| || ||||| || || |||||||||||| Sbjct: 6757623 ccgttgagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcc 6757564 Query: 326 cag 328 ||| Sbjct: 6757563 cag 6757561 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagct 330 |||||| || |||||||||||||||||||| Sbjct: 6741928 cgcctcggtgaggtggatgccgtcccagct 6741899 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 23483066 cctcccctcccctccccagc 23483085 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 10442955 gatcctcccctcccctcccc 10442974
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 144367 cgcctcggtgaggtggatgccgtcccagctc 144337 Score = 40.1 bits (20), Expect = 6.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 |||||||||||| || ||||| | |||||||||| ||| ||| ||||||| |||||| Sbjct: 167407 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 167348 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgc 386 | | | | | |||| |||||||||| |||||| Sbjct: 167347 cacggtcacccccgccatgccgcactgcgcgc 167316
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 308 gtcaggtggatgccgtcccagctcagcgacgacgacggg 346 |||| |||||||||||||||||||| ||||||||||| Sbjct: 384 gtcatgtggatgccgtcccagctcacgtacgacgacggg 422
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0410C01 Length = 138424 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 308 gtcaggtggatgccgtcccagctcagcgacgacgacggg 346 |||| |||||||||||||||||||| ||||||||||| Sbjct: 137061 gtcatgtggatgccgtcccagctcacgtacgacgacggg 137099
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1124 gcctccgtcaggtggacgccgtcccag 1098
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1121 gcctccgtcaggtggacgccgtcccag 1095
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 965 cgcctcggtgaggtggatgccgtcccagctc 935
>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full insert sequence Length = 1580 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 308 gtcaggtggatgccgtcccagctcagcgacgacgacggg 346 |||| |||||||||||||||||||| ||||||||||| Sbjct: 1179 gtcatgtggatgccgtcccagctcacgtacgacgacggg 1141
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full insert sequence Length = 1583 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 1193 cgcctcggtgaggtggatgccgtcccagctc 1163
>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full insert sequence Length = 1323 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 308 gtcaggtggatgccgtcccagctcagcgacgacgacggg 346 |||| |||||||||||||||||||| ||||||||||| Sbjct: 1175 gtcatgtggatgccgtcccagctcacgtacgacgacggg 1137
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1124 gcctccgtcaggtggacgccgtcccag 1098
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full insert sequence Length = 1356 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagctc 331 |||||| || ||||||||||||||||||||| Sbjct: 965 cgcctcggtgaggtggatgccgtcccagctc 935
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 gcctccgtcaggtggatgccgtcccag 328 |||||||||||||||| |||||||||| Sbjct: 1384 gcctccgtcaggtggacgccgtcccag 1358
>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228417 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagcttc 175 ||||||||||||||||||||||| Sbjct: 174044 cctcccctcccctccccagcttc 174066
>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence Length = 189521 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagcttc 175 ||||||||||||||||||||||| Sbjct: 95801 cctcccctcccctccccagcttc 95779
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||| ||||||||| Sbjct: 1055 gccgcctccgtgaggtggatcccgtcccag 1026
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagct 330 |||||| || |||||||||||||||||||| Sbjct: 1023 cgcctcggtgaggtggatgccgtcccagct 994
>ref|XM_466608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 cgtcaggtggatgccgtcccagctca 332 ||||||||||| |||||||||||||| Sbjct: 1128 cgtcaggtggacgccgtcccagctca 1103
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagct 330 |||||| || |||||||||||||||||||| Sbjct: 113090 cgcctcggtgaggtggatgccgtcccagct 113061
>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland Research Institute) complete sequence Length = 221805 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 179 gaaggaaaccgaggaacaaccc 200 |||||||||||||||||||||| Sbjct: 140745 gaaggaaaccgaggaacaaccc 140724
>emb|X74507.1|PSMDH P.sativum mdh mRNA for chloroplast malate dehydrogenase (NADP+) Length = 1326 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 ctctaggactaggactaggact 236 |||||||||||||||||||||| Sbjct: 72 ctctaggactaggactaggact 93
>gb|AY883461.1| Zea mays subsp. parviglumis cultivar HGW-Wilkes Site 6 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1566 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactag 238 |||||||||||||||||||||| Sbjct: 1528 ctaggactaggactaggactag 1549
>gb|AY883460.1| Zea mays subsp. parviglumis cultivar BFB-Benz 967 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1266 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactag 238 |||||||||||||||||||||| Sbjct: 1228 ctaggactaggactaggactag 1249
>gb|AY883459.1| Zea mays subsp. parviglumis cultivar TAK-Kato Site 4 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1374 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactag 238 |||||||||||||||||||||| Sbjct: 1336 ctaggactaggactaggactag 1357
>gb|AY883452.1| Zea mays subsp. parviglumis cultivar GWB-Beadle&Kato Site 4 teosinte glume architecture 1 (tga1) gene, promoter region Length = 1254 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactag 238 |||||||||||||||||||||| Sbjct: 1216 ctaggactaggactaggactag 1237
>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181831 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactaggaca 242 ||||||||||||||||||| |||||| Sbjct: 97739 ctaggactaggactaggacgaggaca 97764 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 actaggactaggactaggac 241 |||||||||||||||||||| Sbjct: 97738 actaggactaggactaggac 97757
>gb|AC105421.2| Homo sapiens BAC clone RP11-695A18 from 4, complete sequence Length = 162793 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 151 atcctcccctcccctccccagc 172 |||||||||||||||||||||| Sbjct: 119359 atcctcccctcccctccccagc 119338
>dbj|AP004280.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0648E08 Length = 135175 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactagga 240 |||||||||||||||||||||| Sbjct: 55947 aggactaggactaggactagga 55926
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 aggactaggactaggactagga 240 |||||||||||||||||||||| Sbjct: 143142 aggactaggactaggactagga 143121
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 cgtcaggtggatgccgtcccagctca 332 ||||||||||| |||||||||||||| Sbjct: 123205 cgtcaggtggacgccgtcccagctca 123230
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full insert sequence Length = 1551 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 cgcctccgtcaggtggatgccgtcccagct 330 |||||| || |||||||||||||||||||| Sbjct: 1113 cgcctcggtgaggtggatgccgtcccagct 1084
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full insert sequence Length = 1723 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 ||||||||||| |||||||| ||||||||| Sbjct: 1284 gccgcctccgtgaggtggatcccgtcccag 1255
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence Length = 916 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 299 gccgcctccgtcaggtggatgccgtcccag 328 |||||||| || |||||||||||||||||| Sbjct: 545 gccgcctcggtgaggtggatgccgtcccag 516
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 217 ctaggactaggactaggactaggaca 242 ||||||||||||||||||| |||||| Sbjct: 258293 ctaggactaggactaggacgaggaca 258318 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 actaggactaggactaggac 241 |||||||||||||||||||| Sbjct: 258292 actaggactaggactaggac 258311
>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete sequence Length = 133534 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 aatggtgatcctcccctcccctcccc 169 |||||||| ||||||||||||||||| Sbjct: 116476 aatggtgaccctcccctcccctcccc 116451
>ref|NM_112144.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.1 mRNA, complete cds Length = 1709 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggactaggactaggactagga 240 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>ref|NM_180243.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.3 mRNA, complete cds Length = 1733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggactaggactaggactagga 240 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>ref|NM_180242.2| Arabidopsis thaliana unknown protein AT3G13062 transcript variant AT3G13062.2 mRNA, complete cds Length = 1716 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggactaggactaggactagga 240 ||||||||||||||||||||| Sbjct: 114 ggactaggactaggactagga 94
>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence Length = 211853 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 atcctcccctcccctccccag 171 ||||||||||||||||||||| Sbjct: 153086 atcctcccctcccctccccag 153106
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tcctcccctcccctccccagc 172 ||||||||||||||||||||| Sbjct: 4510224 tcctcccctcccctccccagc 4510204
>gb|AC124748.5| Mus musculus BAC clone RP23-261I7 from chromosome 17, complete sequence Length = 184968 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 atcctcccctcccctccccag 171 ||||||||||||||||||||| Sbjct: 71458 atcctcccctcccctccccag 71478
>gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosome 14, complete sequence Length = 146974 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 aggactaggactaggactagg 239 ||||||||||||||||||||| Sbjct: 7429 aggactaggactaggactagg 7449
>gb|AC110157.7| Mus musculus chromosome 14, clone RP23-151K23, complete sequence Length = 243114 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 atcctcccctcccctccccagcttc 175 |||||||||||||| |||||||||| Sbjct: 59775 atcctcccctccccaccccagcttc 59751
>gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complete sequence Length = 132562 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tgatcctcccctcccctcccc 169 ||||||||||||||||||||| Sbjct: 3304 tgatcctcccctcccctcccc 3324
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tcctcccctcccctccccagc 172 ||||||||||||||||||||| Sbjct: 4510339 tcctcccctcccctccccagc 4510319
>emb|BX823851.1|CNS0A7G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1562 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggactaggactaggactagga 240 ||||||||||||||||||||| Sbjct: 50 ggactaggactaggactagga 30
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tcctcccctcccctccccagc 172 ||||||||||||||||||||| Sbjct: 115516 tcctcccctcccctccccagc 115496
>gb|AF323755.2| Rhodococcus sp. NCIMB 9784 camphor-degrading gene cluster, partial sequence Length = 9976 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 280 gtcggcgatcttcttgtacgccgcctccg 308 |||||||||||||| ||||||| |||||| Sbjct: 1008 gtcggcgatcttctggtacgcctcctccg 1036
>gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome 13, complete sequence Length = 144172 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tgatcctcccctcccctcccc 169 ||||||||||||||||||||| Sbjct: 12167 tgatcctcccctcccctcccc 12187
>dbj|AB026645.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGH6 Length = 81020 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 ggactaggactaggactagga 240 ||||||||||||||||||||| Sbjct: 75068 ggactaggactaggactagga 75048
>gb|AC004052.1|AC004052 Homo sapiens chromosome 4 clone B209B10 map 4q25, complete sequence Length = 156490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 tagtaaataaaaataatggtg 150 ||||||||||||||||||||| Sbjct: 31388 tagtaaataaaaataatggtg 31408
>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete sequence Length = 196737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 tgatcctcccctcccctcccc 169 ||||||||||||||||||||| Sbjct: 22016 tgatcctcccctcccctcccc 22036
>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b, complete sequence Length = 43428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 aatcaatcaaattcaaaccga 69 ||||||||||||||||||||| Sbjct: 27591 aatcaatcaaattcaaaccga 27571
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 40.1 bits (20), Expect = 6.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 |||||||||||| || ||||| | |||||||||| ||| ||| ||||||| |||||| Sbjct: 1044 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 985 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgc 386 | | | | | |||| |||||||||| |||||| Sbjct: 984 cacggtcacccccgccatgccgcactgcgcgc 953
>gb|AC169502.1| Mus musculus BAC clone RP24-409G12 from chromosome 9, complete sequence Length = 146217 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 35131 atcctcccctcccctcccca 35112 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 23207 atcctcccctcccctcccca 23188
>gb|BT017648.1| Zea mays clone EL01N0439D04.c mRNA sequence Length = 630 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 atcaatcaaattcaaaccga 69 |||||||||||||||||||| Sbjct: 112 atcaatcaaattcaaaccga 93
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 125988 gatcctcccctcccctcccc 126007
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence Length = 186659 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 56878 atcctcccctcccctcccca 56897
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 1138576 cctcccctcccctccccagc 1138557
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 4286 cctcccctcccctccccagc 4267
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgcgccgcagcacgccctc 433 |||||||||||||||||||| Sbjct: 18490 ccgcgccgcagcacgccctc 18509
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 59771 gatcctcccctcccctcccc 59790
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 128557 gatcctcccctcccctcccc 128538
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgcgccgcagcacgccctc 433 |||||||||||||||||||| Sbjct: 131319 ccgcgccgcagcacgccctc 131338
>gb|AC146187.2| Pan troglodytes BAC clone RP43-25A10 from 7, complete sequence Length = 156796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 79164 cctcccctcccctccccagc 79145
>gb|DQ371286.1| Culicoides flavipulicaris haplotype Fla03 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 369 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|DQ371285.1| Culicoides flavipulicaris haplotype Fla02 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 368 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|DQ371284.1| Culicoides flavipulicaris haplotype Fla01 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2a, 2S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 368 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 291 tagtaaataaaaataatggt 272
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence Length = 168986 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 74802 atcctcccctcccctcccca 74821
>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence Length = 224904 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 157781 cctcccctcccctccccagc 157762
>gb|AC161246.2| Mus musculus BAC clone RP24-421E18 from chromosome 9, complete sequence Length = 201524 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tcctcccctcccctccccag 171 |||||||||||||||||||| Sbjct: 170741 tcctcccctcccctccccag 170760
>gb|AC138208.11| Mus musculus chromosome 1, clone RP23-304E4, complete sequence Length = 166332 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 41073 cctcccctcccctccccagc 41054
>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence Length = 148447 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 74216 cctcccctcccctccccagc 74197
>gb|AC004691.1| Homo sapiens PAC clone RP4-740D2 from 7, complete sequence Length = 141990 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 125887 cctcccctcccctccccagc 125906
>gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome 14, complete sequence Length = 182464 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tcctcccctcccctccccag 171 |||||||||||||||||||| Sbjct: 89358 tcctcccctcccctccccag 89377
>emb|CT009546.4| Mouse DNA sequence from clone RP23-111H19 on chromosome 13, complete sequence Length = 207769 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ggactaggactaggactagg 239 |||||||||||||||||||| Sbjct: 27853 ggactaggactaggactagg 27872
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 atcctcccctcccctccccagctt 174 ||||| |||||||||||||||||| Sbjct: 114040 atccttccctcccctccccagctt 114017
>emb|AJ843249.1| Physcomitrella patens mRNA for GDSL-like lipase precursor (gdslll gene) Length = 1752 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gtggatgccgtcccagctca 332 |||||||||||||||||||| Sbjct: 1239 gtggatgccgtcccagctca 1220
>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence Length = 212273 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gactaggactaggactagga 240 |||||||||||||||||||| Sbjct: 108793 gactaggactaggactagga 108812
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 tcctcccctcccctccccagcttc 175 |||||||||||||||||| ||||| Sbjct: 136673 tcctcccctcccctcccctgcttc 136650
>gb|AC107715.5| Mus musculus chromosome 10, clone RP24-376I19, complete sequence Length = 156153 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctcccctcccctccccagct 173 |||||||||||||||||||| Sbjct: 8434 ctcccctcccctccccagct 8415
>gb|AC157809.4| Mus musculus chromosome 1, clone RP24-375B12, complete sequence Length = 138350 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 72135 cctcccctcccctccccagc 72154
>emb|AL512658.12| Human DNA sequence from clone RP11-518I13 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 173103 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 tcctcccctcccctccccagcttc 175 ||||||||||||||||||| |||| Sbjct: 104505 tcctcccctcccctccccatcttc 104528
>emb|AL451063.4| Human DNA sequence from clone RP11-267N12 on chromosome 1 Contains the 5' end of the RGS5 gene for regulator of G-protein signalling 5, the 3' ends of two novel genes and a CCA-adding tRNA nucleotidyl transferase 1 (TRNT1) pseudogene, complete sequence Length = 66608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 33300 cctcccctcccctccccagc 33319
>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence Length = 173681 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cccctcccctccccagcttc 175 |||||||||||||||||||| Sbjct: 79702 cccctcccctccccagcttc 79683
>emb|AL121827.34|HSA261N11 Human DNA sequence from clone RP11-261N11 on chromosome 20, complete sequence Length = 184223 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 agctggcggggctcttgacc 472 |||||||||||||||||||| Sbjct: 54835 agctggcggggctcttgacc 54816
>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the 3' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for macrophage galactose N-acetyl-galactosamine specific lectin 1, the gene for a novel RNA polymerase Rpb1 C-terminal repeat domain containing protein, three novel genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12 gene for arachidonate 12-lipoxygenase and four CpG islands, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 98173 gatcctcccctcccctcccc 98154
>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete sequence Length = 212982 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 78195 gatcctcccctcccctcccc 78176
>dbj|AK123873.1| Homo sapiens cDNA FLJ41879 fis, clone OCBBF2020741 Length = 3334 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 agctggcggggctcttgacc 472 |||||||||||||||||||| Sbjct: 1859 agctggcggggctcttgacc 1840
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tattcttgcaacacatcacc 93 |||||||||||||||||||| Sbjct: 66982 tattcttgcaacacatcacc 67001
>gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182817 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ctcccctcccctccccagct 173 |||||||||||||||||||| Sbjct: 110843 ctcccctcccctccccagct 110824
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgcgccgcagcacgccctc 433 |||||||||||||||||||| Sbjct: 16490720 ccgcgccgcagcacgccctc 16490739
>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence Length = 192356 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tcctcccctcccctccccag 171 |||||||||||||||||||| Sbjct: 122068 tcctcccctcccctccccag 122087
>gb|AC146604.5| Mus musculus BAC clone RP23-306G1 from chromosome 13, complete sequence Length = 213725 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 201445 tagtaaataaaaataatggt 201426
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 atcctcccctcccctccccagctt 174 ||||||||||||||||||| |||| Sbjct: 186672 atcctcccctcccctcccctgctt 186649
>gb|AC131157.4| Homo sapiens 12 BAC RP11-70F11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180907 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 34478 cctcccctcccctccccagc 34459
>gb|AF130418.3|AF130418 Homo sapiens chromosome 21q21 PCY PAC2N gi 5430716 containing marker STS SHGC-8183, complete sequence Length = 104835 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 94774 tagtaaataaaaataatggt 94755
>gb|AC117695.15| Mus musculus chromosome 1, clone RP23-450I19, complete sequence Length = 188171 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 45155 cctcccctcccctccccagc 45174
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 1395 cctcccctcccctccccagc 1376
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 86651 gatcctcccctcccctcccc 86670
>dbj|BS000032.1| Pan troglodytes chromosome 22 clone:RP43-047I19, map 22, complete sequences Length = 166625 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 106784 tagtaaataaaaataatggt 106765
>dbj|AK102461.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094D02, full insert sequence Length = 2454 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 175 cctcccctcccctccccagc 156
>gb|AC136371.4| Mus musculus chromosome 1, clone RP23-405G16, complete sequence Length = 225976 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 44178 cctcccctcccctccccagc 44159
>emb|CR936459.5| Zebrafish DNA sequence from clone CH211-200O1 in linkage group 22, complete sequence Length = 54345 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ttacacgagaatcaatcaaa 59 |||||||||||||||||||| Sbjct: 13123 ttacacgagaatcaatcaaa 13104
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full insert sequence Length = 1622 Score = 40.1 bits (20), Expect = 6.5 Identities = 74/92 (80%) Strand = Plus / Minus Query: 295 gtacgccgcctccgtcaggtggatgccgtcccagctcagcgacgacgacgggctgccgca 354 |||||||||||| || ||||| | |||||||||| ||| ||| ||||||| |||||| Sbjct: 1226 gtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgccgca 1167 Query: 355 cgccgacgcgcccgacatgccgcaccgcgcgc 386 | | | | | |||| |||||||||| |||||| Sbjct: 1166 cacggtcacccccgccatgccgcactgcgcgc 1135
>dbj|AP000439.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-44E22, complete sequence Length = 105962 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cccctcccctccccagcttc 175 |||||||||||||||||||| Sbjct: 10746 cccctcccctccccagcttc 10727
>dbj|AP001669.1| Homo sapiens genomic DNA, chromosome 21q, section 13/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 68182 tagtaaataaaaataatggt 68163
>dbj|AP003965.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-31O9, complete sequence Length = 121852 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cccctcccctccccagcttc 175 |||||||||||||||||||| Sbjct: 80614 cccctcccctccccagcttc 80595
>emb|BX510358.4| Mouse DNA sequence from clone RP23-78G10 on chromosome X, complete sequence Length = 60208 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 12518 cctcccctcccctccccagc 12499
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gccgcacgccgacgcgcccg 368 |||||||||||||||||||| Sbjct: 2140766 gccgcacgccgacgcgcccg 2140747
>gb|AC162298.4| Mus musculus chromosome 1, clone RP24-285P15, complete sequence Length = 138146 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 atcctcccctcccctccccagctt 174 ||||||||||||||||||| |||| Sbjct: 17301 atcctcccctcccctcccctgctt 17278
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gctcagcgacgacgacgggc 347 |||||||||||||||||||| Sbjct: 984973 gctcagcgacgacgacgggc 984954
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgcgccgcagcacgccctc 433 |||||||||||||||||||| Sbjct: 16581725 ccgcgccgcagcacgccctc 16581744
>emb|AL935121.9| Mouse DNA sequence from clone RP23-432M14 on chromosome 2, complete sequence Length = 106940 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 96090 cctcccctcccctccccagc 96109
>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence Length = 180698 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 158199 cctcccctcccctccccagc 158218
>gb|AC134608.3| Mus musculus BAC clone RP23-68H13 from 13, complete sequence Length = 253539 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tagtaaataaaaataatggt 149 |||||||||||||||||||| Sbjct: 140268 tagtaaataaaaataatggt 140249
>dbj|AP005233.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-211G23, complete sequence Length = 157200 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cccctcccctccccagcttc 175 |||||||||||||||||||| Sbjct: 103608 cccctcccctccccagcttc 103589
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 135300 atcctcccctcccctcccca 135281 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 atcctcccctcccctcccca 170 |||||||||||||||||||| Sbjct: 123377 atcctcccctcccctcccca 123358
>gb|AC171200.1| Mus musculus BAC clone RP24-423F5 from chromosome 13, complete sequence Length = 170621 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ggactaggactaggactagg 239 |||||||||||||||||||| Sbjct: 161316 ggactaggactaggactagg 161335
>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete sequence Length = 142263 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 aggaaggaaaccgaggaaca 196 |||||||||||||||||||| Sbjct: 18532 aggaaggaaaccgaggaaca 18551
>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete sequence Length = 230634 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ctcccctcccctccccagct 173 |||||||||||||||||||| Sbjct: 77902 ctcccctcccctccccagct 77921
>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete sequence Length = 213730 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gatcctcccctcccctcccc 169 |||||||||||||||||||| Sbjct: 5411 gatcctcccctcccctcccc 5392
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cctcccctcccctccccagc 172 |||||||||||||||||||| Sbjct: 18790 cctcccctcccctccccagc 18809
>emb|X53538.1|HMRDNAS Herdmania momus rDNA for 18S, 5.8S and 26S ribosomal RNA Length = 7967 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gcacgccgacgcgcccgaca 371 |||||||||||||||||||| Sbjct: 7921 gcacgccgacgcgcccgaca 7902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,118,351 Number of Sequences: 3902068 Number of extensions: 4118351 Number of successful extensions: 175660 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 173874 Number of HSP's gapped (non-prelim): 1758 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
