ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart15b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107128.1| Zea mays PCO069400 mRNA sequence 188 1e-44
2ref|XM_507128.1| PREDICTED Oryza sativa (japonica cultivar-group... 180 3e-42
3ref|XM_480030.1| Oryza sativa (japonica cultivar-group), mRNA 180 3e-42
4dbj|AK067917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
5dbj|AK058337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
6gb|AY111322.1| Zea mays CL6452_2 mRNA sequence 159 1e-35
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
8dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
10ref|XM_478696.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
11dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
12dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
13ref|NM_118265.2| Arabidopsis thaliana structural molecule AT4G21... 70 8e-09
14ref|NM_202855.1| Arabidopsis thaliana structural molecule AT4G21... 70 8e-09
15gb|AY096741.1| Arabidopsis thaliana putative membrane associated... 70 8e-09
16gb|AY070416.1| Arabidopsis thaliana putative membrane associated... 70 8e-09
17emb|BX827866.1|CNS0A306 Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
18emb|BX827571.1|CNS0A2R4 Arabidopsis thaliana Full-length cDNA Co... 70 8e-09
19gb|AY087306.1| Arabidopsis thaliana clone 33975 mRNA, complete s... 70 8e-09
20ref|NM_116745.2| Arabidopsis thaliana structural molecule AT4G05... 62 2e-06
21gb|AY143842.1| Arabidopsis thaliana At4g05060/T32N4_12 mRNA, com... 62 2e-06
22gb|AY094468.1| Arabidopsis thaliana AT4g05060/T32N4_12 mRNA, com... 62 2e-06
23dbj|AK221803.1| Arabidopsis thaliana mRNA for hypothetical prote... 62 2e-06
24gb|AY087509.1| Arabidopsis thaliana clone 36198 mRNA, complete s... 62 2e-06
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
26dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
27gb|AF108228.1| Ginkgo biloba GinLFY protein (GinLFY) gene, compl... 46 0.11
28emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genom... 42 1.7
29emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, ... 42 1.7
30emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, ... 42 1.7
31emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.7
32gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana... 42 1.7
33gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 42 1.7
34tpe|BN000118.1|NEU000118 TPA: TPA_inf: Nitrosomonas europaea SMC... 42 1.7
35gb|AC104883.16| Mus musculus chromosome 8, clone RP24-263A8, com... 42 1.7
36ref|NM_191994.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
37ref|XM_477557.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
38gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
39emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 6.8
40gb|AC125397.5| Mus musculus BAC clone RP24-206J16 from chromosom... 40 6.8
41gb|AC098881.3| Mus musculus BAC clone RP23-122B20 from 18, compl... 40 6.8
42emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 i... 40 6.8
43emb|AL357084.12| Human DNA sequence from clone RP11-471B18 on ch... 40 6.8
44emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
45emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in l... 40 6.8
46gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, compl... 40 6.8
47dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
49dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
50gb|AC135961.3| Mus musculus BAC clone RP24-494P18 from chromosom... 40 6.8
51dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
52dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
53dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
54dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
55gb|AF015815.1|AF015815 Anurida maritima retrotransposon R2, comp... 40 6.8
56emb|AL928796.9| Mouse DNA sequence from clone RP23-150I5 on chro... 40 6.8
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8 
>gb|AY107128.1| Zea mays PCO069400 mRNA sequence
          Length = 1375

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/203 (86%)
 Strand = Plus / Minus

                                                                       
Query: 295 accgaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccat 354
           |||||||||||  |||| | |||||| ||||||||||| |||||||||||||||||||||
Sbjct: 907 accgaatcaacaccttcgatctgctggcgagcaaggtacctctctcttcgttccttccat 848

                                                                       
Query: 355 tcatcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggcttcttg 414
           || || || ||||| ||||| ||||||||| ||||||  ||||| |||||||| ||||||
Sbjct: 847 tcgtcaatcacaaggccttcaccaacaatacggggaccattgtcctctggaggtttcttg 788

                                                                       
Query: 415 cgtgcctcaagagctgcttcagcttcagcaagctgacgcttgagtctgtccagttgtgca 474
           ||||||||||| |||||||| |||||||| ||||| ||||||||| |||||| |||||  
Sbjct: 787 cgtgcctcaagggctgcttctgcttcagctagctggcgcttgagtttgtccatttgtggg 728

                                  
Query: 475 ctaggacgctccgcatccaagaa 497
           || || ||||| |||||||||||
Sbjct: 727 cttgggcgctcagcatccaagaa 705
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>ref|XM_507128.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1368_G08.30
           mRNA
          Length = 1288

 Score =  180 bits (91), Expect = 3e-42
 Identities = 154/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 298 gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattca 357
           ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 908 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttccattca 849

                                                                       
Query: 358 tcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggcttcttgcgt 417
           || |||||||| ||||| ||||||||  |||| | | |||| |||||||| |||||||||
Sbjct: 848 tcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggtttcttgcgt 789

                                                                  
Query: 418 gcctcaagagctgcttcagcttcagcaagctgacgcttgagtctgtccagttgtg 472
           || ||||| ||||| || |||||||||||||| ||||||||  |||||| |||||
Sbjct: 788 gcttcaagtgctgcctctgcttcagcaagctggcgcttgagcttgtccatttgtg 734



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                        
Query: 169  atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
            |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 1123 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 1066

                                             
Query: 228  atgaagct-aaatcttaattacacaaagcctca 259
            |||||||| ||||| ||||||||||||||||||
Sbjct: 1065 atgaagctcaaatcctaattacacaaagcctca 1033
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>ref|XM_480030.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1285

 Score =  180 bits (91), Expect = 3e-42
 Identities = 154/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 298 gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattca 357
           ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 918 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttccattca 859

                                                                       
Query: 358 tcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggcttcttgcgt 417
           || |||||||| ||||| ||||||||  |||| | | |||| |||||||| |||||||||
Sbjct: 858 tcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggtttcttgcgt 799

                                                                  
Query: 418 gcctcaagagctgcttcagcttcagcaagctgacgcttgagtctgtccagttgtg 472
           || ||||| ||||| || |||||||||||||| ||||||||  |||||| |||||
Sbjct: 798 gcttcaagtgctgcctctgcttcagcaagctggcgcttgagcttgtccatttgtg 744



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                        
Query: 169  atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
            |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 1133 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 1076

                                             
Query: 228  atgaagct-aaatcttaattacacaaagcctca 259
            |||||||| ||||| ||||||||||||||||||
Sbjct: 1075 atgaagctcaaatcctaattacacaaagcctca 1043
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>dbj|AK067917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123E21, full
           insert sequence
          Length = 1287

 Score =  180 bits (91), Expect = 3e-42
 Identities = 154/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 298 gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattca 357
           ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 906 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttccattca 847

                                                                       
Query: 358 tcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggcttcttgcgt 417
           || |||||||| ||||| ||||||||  |||| | | |||| |||||||| |||||||||
Sbjct: 846 tcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggtttcttgcgt 787

                                                                  
Query: 418 gcctcaagagctgcttcagcttcagcaagctgacgcttgagtctgtccagttgtg 472
           || ||||| ||||| || |||||||||||||| ||||||||  |||||| |||||
Sbjct: 786 gcttcaagtgctgcctctgcttcagcaagctggcgcttgagcttgtccatttgtg 732



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                        
Query: 169  atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
            |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 1121 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 1064

                                             
Query: 228  atgaagct-aaatcttaattacacaaagcctca 259
            |||||||| ||||| ||||||||||||||||||
Sbjct: 1063 atgaagctcaaatcctaattacacaaagcctca 1031
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>dbj|AK058337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D04, full
           insert sequence
          Length = 1285

 Score =  180 bits (91), Expect = 3e-42
 Identities = 154/175 (88%)
 Strand = Plus / Minus

                                                                       
Query: 298 gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattca 357
           ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 918 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttccattca 859

                                                                       
Query: 358 tcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggcttcttgcgt 417
           || |||||||| ||||| ||||||||  |||| | | |||| |||||||| |||||||||
Sbjct: 858 tcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggtttcttgcgt 799

                                                                  
Query: 418 gcctcaagagctgcttcagcttcagcaagctgacgcttgagtctgtccagttgtg 472
           || ||||| ||||| || |||||||||||||| ||||||||  |||||| |||||
Sbjct: 798 gcttcaagtgctgcctctgcttcagcaagctggcgcttgagcttgtccatttgtg 744



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                        
Query: 169  atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
            |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 1133 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 1076

                                             
Query: 228  atgaagct-aaatcttaattacacaaagcctca 259
            |||||||| ||||| ||||||||||||||||||
Sbjct: 1075 atgaagctcaaatcctaattacacaaagcctca 1043
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>gb|AY111322.1| Zea mays CL6452_2 mRNA sequence
          Length = 688

 Score =  159 bits (80), Expect = 1e-35
 Identities = 158/184 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 cctgctgacgagcaaggtatctctctcttcgttccttccattcatcgattacaagccctt 373
           ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 342 cctgctggcgagcgaggtatctctctcttcgttccttccattcatcgatcacaaggcctt 283

                                                                       
Query: 374 cgccaacaatagggggactgttgtcttctggaggcttcttgcgtgcctcaagagctgctt 433
           |||| |||||| |||  |  ||||| || |||||||||||||||||||| || || ||||
Sbjct: 282 cgccgacaatacgggtgccattgtcctccggaggcttcttgcgtgcctccagcgcggctt 223

                                                                       
Query: 434 cagcttcagcaagctgacgcttgagtctgtccagttgtgcactaggacgctccgcatcca 493
           | |||||||| ||||| ||||||||| |||||| |||||  || || ||||| || ||||
Sbjct: 222 ctgcttcagcgagctggcgcttgagtttgtccatttgtgggctcgggcgctcagcgtcca 163

               
Query: 494 agaa 497
           ||||
Sbjct: 162 agaa 159
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 351     ccattcatcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggctt 410
               ||||||||| |||||||| ||||| ||||||||  |||| | | |||| |||||||| ||
Sbjct: 2301619 ccattcatcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggttt 2301560

                                                               
Query: 411     cttgcgtgcctcaagagctgcttcagcttcagcaagctgacgcttgag 458
               ||||||||| ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2301559 cttgcgtgcttcaagtgctgcctctgcttcagcaagctggcgcttgag 2301512



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                     
Query: 298     gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttc 351
               ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2301781 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttc 2301728



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                           
Query: 169     atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
               |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 2301996 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 2301939

                                                
Query: 228     atgaagct-aaatcttaattacacaaagcctca 259
               |||||||| ||||| ||||||||||||||||||
Sbjct: 2301938 atgaagctcaaatcctaattacacaaagcctca 2301906
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>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0473D02
          Length = 146185

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 351   ccattcatcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggctt 410
             ||||||||| |||||||| ||||| ||||||||  |||| | | |||| |||||||| ||
Sbjct: 49118 ccattcatcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggttt 49059

                                                             
Query: 411   cttgcgtgcctcaagagctgcttcagcttcagcaagctgacgcttgag 458
             ||||||||| ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 49058 cttgcgtgcttcaagtgctgcctctgcttcagcaagctggcgcttgag 49011



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 298   gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttc 351
             ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 49280 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttc 49227



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                         
Query: 169   atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
             |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 49495 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 49438

                                              
Query: 228   atgaagct-aaatcttaattacacaaagcctca 259
             |||||||| ||||| ||||||||||||||||||
Sbjct: 49437 atgaagctcaaatcctaattacacaaagcctca 49405
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>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1368_G08
          Length = 107074

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 351   ccattcatcgattacaagcccttcgccaacaatagggggactgttgtcttctggaggctt 410
             ||||||||| |||||||| ||||| ||||||||  |||| | | |||| |||||||| ||
Sbjct: 99746 ccattcatcaattacaaggccttcaccaacaatgcgggggccggtgtcctctggaggttt 99687

                                                             
Query: 411   cttgcgtgcctcaagagctgcttcagcttcagcaagctgacgcttgag 458
             ||||||||| ||||| ||||| || |||||||||||||| ||||||||
Sbjct: 99686 cttgcgtgcttcaagtgctgcctctgcttcagcaagctggcgcttgag 99639



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 51/54 (94%)
 Strand = Plus / Minus

                                                                   
Query: 298   gaatcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttc 351
             ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 99908 gaatcaaccccttcaatctgctgacgagcaaggtatctctctcttcgctccttc 99855



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 81/93 (87%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                          
Query: 169    atattattatcaagcactgacagactatctacatgtagtcccaggaa-gaaatgtggcat 227
              |||||||||||||||| |||| | |||||||||||||| |||||||| ||| ||  ||  
Sbjct: 100123 atattattatcaagcagtgactggctatctacatgtagacccaggaatgaagtgcagc-- 100066

                                               
Query: 228    atgaagct-aaatcttaattacacaaagcctca 259
              |||||||| ||||| ||||||||||||||||||
Sbjct: 100065 atgaagctcaaatcctaattacacaaagcctca 100033
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>ref|XM_478696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1173

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 301 tcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattcatcg 360
           |||||| |||||||||| ||  | ||||| ||||| || |||||||| ||||||||||||
Sbjct: 865 tcaaccacttcaacctgttgttgtgcaagatatctttcccttcgttctttccattcatcg 806

                                  
Query: 361 attacaagcccttcgccaacaat 383
           || ||||||||||||||||||||
Sbjct: 805 atgacaagcccttcgccaacaat 783
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>dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145E05, full
           insert sequence
          Length = 1173

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 301 tcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattcatcg 360
           |||||| |||||||||| ||  | ||||| ||||| || |||||||| ||||||||||||
Sbjct: 865 tcaaccacttcaacctgttgttgtgcaagatatctttcccttcgttctttccattcatcg 806

                                  
Query: 361 attacaagcccttcgccaacaat 383
           || ||||||||||||||||||||
Sbjct: 805 atgacaagcccttcgccaacaat 783
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>dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E12, full
            insert sequence
          Length = 1741

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 301  tcaacctcttcaacctgctgacgagcaaggtatctctctcttcgttccttccattcatcg 360
            |||||| |||||||||| ||  | ||||| ||||| || |||||||| ||||||||||||
Sbjct: 1430 tcaaccacttcaacctgttgttgtgcaagatatctttcccttcgttctttccattcatcg 1371

                                   
Query: 361  attacaagcccttcgccaacaat 383
            || ||||||||||||||||||||
Sbjct: 1370 atgacaagcccttcgccaacaat 1348
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>ref|NM_118265.2| Arabidopsis thaliana structural molecule AT4G21450 transcript
           variant AT4G21450.1 mRNA, complete cds
          Length = 1219

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 967 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 913
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>ref|NM_202855.1| Arabidopsis thaliana structural molecule AT4G21450 transcript variant
            AT4G21450.2 mRNA, complete cds
          Length = 1480

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 325  gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
            ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 1228 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 1174
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>gb|AY096741.1| Arabidopsis thaliana putative membrane associated protein
           (At4g21450) mRNA, complete cds
          Length = 919

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 854 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 800
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>gb|AY070416.1| Arabidopsis thaliana putative membrane associated protein
           (At4g21450) mRNA, complete cds
          Length = 1200

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 932 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 878
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>emb|BX827866.1|CNS0A306 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH29ZC07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1064

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 850 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 796
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>emb|BX827571.1|CNS0A2R4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS76ZH03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1168

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 945 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 891
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>gb|AY087306.1| Arabidopsis thaliana clone 33975 mRNA, complete sequence
          Length = 1201

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 964 gcaagatatctctctctacgctccttccattcatcgatcacaagcccttctccaa 910
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>ref|NM_116745.2| Arabidopsis thaliana structural molecule AT4G05060 mRNA, complete
           cds
          Length = 1207

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||  |||| ||||||||||||||| ||||||||||| ||||
Sbjct: 996 gcaagatatctctctcggcgttgcttccattcatcgatcacaagcccttctccaa 942
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>gb|AY143842.1| Arabidopsis thaliana At4g05060/T32N4_12 mRNA, complete cds
          Length = 864

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||  |||| ||||||||||||||| ||||||||||| ||||
Sbjct: 833 gcaagatatctctctcggcgttgcttccattcatcgatcacaagcccttctccaa 779
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>gb|AY094468.1| Arabidopsis thaliana AT4g05060/T32N4_12 mRNA, complete cds
          Length = 1208

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||  |||| ||||||||||||||| ||||||||||| ||||
Sbjct: 996 gcaagatatctctctcggcgttgcttccattcatcgatcacaagcccttctccaa 942
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>dbj|AK221803.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL21-83-D01
          Length = 559

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||  |||| ||||||||||||||| ||||||||||| ||||
Sbjct: 338 gcaagatatctctctcggcgttgcttccattcatcgatcacaagcccttctccaa 284
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>gb|AY087509.1| Arabidopsis thaliana clone 36198 mRNA, complete sequence
          Length = 1073

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 325 gcaaggtatctctctcttcgttccttccattcatcgattacaagcccttcgccaa 379
           ||||| ||||||||||  |||| ||||||||||||||| ||||||||||| ||||
Sbjct: 898 gcaagatatctctctcggcgttgcttccattcatcgatcacaagcccttctccaa 844
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 351      ccattcatcgattacaagcccttcgccaacaat 383
                |||||||||||| ||||||||||||||||||||
Sbjct: 22284242 ccattcatcgatgacaagcccttcgccaacaat 22284210



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 407      gcttcttgcgtgcctcaaga 426
                ||||||||||||||||||||
Sbjct: 11467772 gcttcttgcgtgcctcaaga 11467791
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 351   ccattcatcgattacaagcccttcgccaacaat 383
             |||||||||||| ||||||||||||||||||||
Sbjct: 89488 ccattcatcgatgacaagcccttcgccaacaat 89456
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>gb|AF108228.1| Ginkgo biloba GinLFY protein (GinLFY) gene, complete cds
          Length = 3453

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 235  taaatcttaattacacaaagcct 257
            |||||||||||||||||||||||
Sbjct: 3098 taaatcttaattacacaaagcct 3076
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>emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 9/10
          Length = 326050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   ttcagcttcagcaagctgacg 452
             |||||||||||||||||||||
Sbjct: 57455 ttcagcttcagcaagctgacg 57475
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>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55
          Length = 194916

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 351   ccattcatcgattacaagcccttcgccaa 379
             |||||||||||| ||||||||||| ||||
Sbjct: 45841 ccattcatcgatcacaagcccttctccaa 45813
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>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
          Length = 198563

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 351    ccattcatcgattacaagcccttcgccaa 379
              |||||||||||| ||||||||||| ||||
Sbjct: 122442 ccattcatcgatcacaagcccttctccaa 122470
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>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project)
          Length = 95266

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 351   ccattcatcgattacaagcccttcgccaa 379
             |||||||||||| ||||||||||| ||||
Sbjct: 32833 ccattcatcgatcacaagcccttctccaa 32805
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>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
              complete sequence
          Length = 183147

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 351    ccattcatcgattacaagcccttcgccaa 379
              |||||||||||| ||||||||||| ||||
Sbjct: 130667 ccattcatcgatcacaagcccttctccaa 130639
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>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4
          Length = 80196

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 351   ccattcatcgattacaagcccttcgccaa 379
             |||||||||||| ||||||||||| ||||
Sbjct: 60917 ccattcatcgatcacaagcccttctccaa 60945
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>tpe|BN000118.1|NEU000118 TPA: TPA_inf: Nitrosomonas europaea SMC gene
          Length = 3528

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 432 ttcagcttcagcaagctgacg 452
           |||||||||||||||||||||
Sbjct: 975 ttcagcttcagcaagctgacg 955
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>gb|AC104883.16| Mus musculus chromosome 8, clone RP24-263A8, complete sequence
          Length = 198707

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   agagctgcttcagcttcagca 444
             |||||||||||||||||||||
Sbjct: 90337 agagctgcttcagcttcagca 90317
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>ref|NM_191994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3138

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  ggaggatattattatcaagc 183
            ||||||||||||||||||||
Sbjct: 2814 ggaggatattattatcaagc 2833
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>ref|XM_477557.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 gcttcttgcgtgcctcaaga 426
           ||||||||||||||||||||
Sbjct: 286 gcttcttgcgtgcctcaaga 267
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>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0069E11,
              complete sequence
          Length = 136959

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 217    aaatgtggcatatgaagcta 236
              ||||||||||||||||||||
Sbjct: 102719 aaatgtggcatatgaagcta 102700
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>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
              sequence
          Length = 635328

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    tggcatatgaagctaaatcttaat 245
              ||||||||| ||||||||||||||
Sbjct: 576863 tggcatatgcagctaaatcttaat 576840
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>gb|AC125397.5| Mus musculus BAC clone RP24-206J16 from chromosome 2, complete sequence
          Length = 134401

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 333   tctctctcttcgttccttccattc 356
             ||||||||||| ||||||||||||
Sbjct: 56258 tctctctcttccttccttccattc 56235
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>gb|AC098881.3| Mus musculus BAC clone RP23-122B20 from 18, complete sequence
          Length = 226736

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    ttttcagcactatgtttata 295
              ||||||||||||||||||||
Sbjct: 114129 ttttcagcactatgtttata 114110
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>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8,
             complete sequence
          Length = 130762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    agatagaattacatttggta 72
             ||||||||||||||||||||
Sbjct: 71987 agatagaattacatttggta 71968
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>emb|AL357084.12| Human DNA sequence from clone RP11-471B18 on chromosome 6 Contains a
             ribosomal protein S18 (40S ribosomal protein S18)
             (RPS18)(KE3, HKE3, KE-3) pseudogene, complete sequence
          Length = 76042

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cgagcaaggtatctctctct 341
             ||||||||||||||||||||
Sbjct: 60812 cgagcaaggtatctctctct 60793
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>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04,
             complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   aaatgtggcatatgaagcta 236
             ||||||||||||||||||||
Sbjct: 15030 aaatgtggcatatgaagcta 15049
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>emb|BX469925.6| Zebrafish DNA sequence from clone DKEY-14O1 in linkage group 17,
             complete sequence
          Length = 86811

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   caagagctgcttcagcttca 441
             ||||||||||||||||||||
Sbjct: 38836 caagagctgcttcagcttca 38817
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>gb|AC026708.6| Homo sapiens chromosome 5 clone CTD-2078B5, complete sequence
          Length = 142047

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   tttttcagcactatgtttat 294
             ||||||||||||||||||||
Sbjct: 82385 tttttcagcactatgtttat 82404
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 217      aaatgtggcatatgaagcta 236
                ||||||||||||||||||||
Sbjct: 28948372 aaatgtggcatatgaagcta 28948391
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     aaatgtggcatatgaagcta 236
               ||||||||||||||||||||
Sbjct: 8423793 aaatgtggcatatgaagcta 8423774
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 164      ggaggatattattatcaagc 183
                ||||||||||||||||||||
Sbjct: 27724567 ggaggatattattatcaagc 27724586
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>gb|AC135961.3| Mus musculus BAC clone RP24-494P18 from chromosome 18, complete sequence
          Length = 197411

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    ttttcagcactatgtttata 295
              ||||||||||||||||||||
Sbjct: 193493 ttttcagcactatgtttata 193474
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>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1117_G01
          Length = 125454

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ggaggatattattatcaagc 183
             ||||||||||||||||||||
Sbjct: 16622 ggaggatattattatcaagc 16641
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>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485G01
          Length = 167203

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    ggaggatattattatcaagc 183
              ||||||||||||||||||||
Sbjct: 133133 ggaggatattattatcaagc 133152
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   gcttcttgcgtgcctcaaga 426
             ||||||||||||||||||||
Sbjct: 31430 gcttcttgcgtgcctcaaga 31449
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446G09
          Length = 146898

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   gcttcttgcgtgcctcaaga 426
             ||||||||||||||||||||
Sbjct: 77292 gcttcttgcgtgcctcaaga 77311
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>gb|AF015815.1|AF015815 Anurida maritima retrotransposon R2, complete sequence
          Length = 4277

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 432 ttcagcttcagcaagctgac 451
           ||||||||||||||||||||
Sbjct: 839 ttcagcttcagcaagctgac 820
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>emb|AL928796.9| Mouse DNA sequence from clone RP23-150I5 on chromosome 2, complete
              sequence
          Length = 203793

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 333    tctctctcttcgttccttccattc 356
              ||||||||||| ||||||||||||
Sbjct: 110313 tctctctcttccttccttccattc 110336
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     aaatgtggcatatgaagcta 236
               ||||||||||||||||||||
Sbjct: 8494556 aaatgtggcatatgaagcta 8494537


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,971,679
Number of Sequences: 3902068
Number of extensions: 4971679
Number of successful extensions: 80946
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80721
Number of HSP's gapped (non-prelim): 225
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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